Result of FASTA (omim) for
pF1KSDA0141
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0141, 515 aa
1>>>pF1KSDA0141 515 - 515 aa - 515 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7686+/-0.000323; mu= 13.1498+/- 0.020
mean_var=125.9209+/-25.627, 0's: 0 Z-trim(119.8): 28 B-trim: 0 in 0/53
Lambda= 0.114294
statistics sampled from 34276 (34304) to 34276 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.746), E-opt: 0.2 (0.402), width: 16
Scan time: 10.480
The best scores are: opt bits E(85289)
NP_055588 (OMIM: 615741) death ligand signal enhan ( 515) 3516 590.8 3.2e-168
XP_005268604 (OMIM: 615741) PREDICTED: death ligan ( 515) 3516 590.8 3.2e-168
XP_005268605 (OMIM: 615741) PREDICTED: death ligan ( 515) 3516 590.8 3.2e-168
NP_001136075 (OMIM: 615741) death ligand signal en ( 515) 3516 590.8 3.2e-168
XP_011536017 (OMIM: 615741) PREDICTED: death ligan ( 405) 2651 448.1 2.3e-125
XP_005268609 (OMIM: 615741) PREDICTED: death ligan ( 389) 2644 446.9 5e-125
XP_011536018 (OMIM: 615741) PREDICTED: death ligan ( 286) 1764 301.7 1.9e-81
XP_006714875 (OMIM: 615741) PREDICTED: death ligan ( 260) 1729 295.9 9.6e-80
>>NP_055588 (OMIM: 615741) death ligand signal enhancer (515 aa)
initn: 3516 init1: 3516 opt: 3516 Z-score: 3141.0 bits: 590.8 E(85289): 3.2e-168
Smith-Waterman score: 3516; 100.0% identity (100.0% similar) in 515 aa overlap (1-515:1-515)
10 20 30 40 50 60
pF1KSD MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL
430 440 450 460 470 480
490 500 510
pF1KSD LCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG
:::::::::::::::::::::::::::::::::::
NP_055 LCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG
490 500 510
>>XP_005268604 (OMIM: 615741) PREDICTED: death ligand si (515 aa)
initn: 3516 init1: 3516 opt: 3516 Z-score: 3141.0 bits: 590.8 E(85289): 3.2e-168
Smith-Waterman score: 3516; 100.0% identity (100.0% similar) in 515 aa overlap (1-515:1-515)
10 20 30 40 50 60
pF1KSD MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL
430 440 450 460 470 480
490 500 510
pF1KSD LCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG
:::::::::::::::::::::::::::::::::::
XP_005 LCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG
490 500 510
>>XP_005268605 (OMIM: 615741) PREDICTED: death ligand si (515 aa)
initn: 3516 init1: 3516 opt: 3516 Z-score: 3141.0 bits: 590.8 E(85289): 3.2e-168
Smith-Waterman score: 3516; 100.0% identity (100.0% similar) in 515 aa overlap (1-515:1-515)
10 20 30 40 50 60
pF1KSD MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL
430 440 450 460 470 480
490 500 510
pF1KSD LCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG
:::::::::::::::::::::::::::::::::::
XP_005 LCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG
490 500 510
>>NP_001136075 (OMIM: 615741) death ligand signal enhanc (515 aa)
initn: 3516 init1: 3516 opt: 3516 Z-score: 3141.0 bits: 590.8 E(85289): 3.2e-168
Smith-Waterman score: 3516; 100.0% identity (100.0% similar) in 515 aa overlap (1-515:1-515)
10 20 30 40 50 60
pF1KSD MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL
430 440 450 460 470 480
490 500 510
pF1KSD LCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG
:::::::::::::::::::::::::::::::::::
NP_001 LCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG
490 500 510
>>XP_011536017 (OMIM: 615741) PREDICTED: death ligand si (405 aa)
initn: 2700 init1: 2647 opt: 2651 Z-score: 2371.6 bits: 448.1 E(85289): 2.3e-125
Smith-Waterman score: 2651; 97.7% identity (98.5% similar) in 394 aa overlap (1-394:1-394)
10 20 30 40 50 60
pF1KSD MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN
:::::::::::::::::::::::. : . .:
XP_011 FTKEPYLDEQRAVKYLWLAANNGEEVSCPNAWMCLLDFQNFSPQP
370 380 390 400
430 440 450 460 470 480
pF1KSD EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL
>>XP_005268609 (OMIM: 615741) PREDICTED: death ligand si (389 aa)
initn: 2644 init1: 2644 opt: 2644 Z-score: 2365.6 bits: 446.9 E(85289): 5e-125
Smith-Waterman score: 2644; 100.0% identity (100.0% similar) in 383 aa overlap (1-383:1-383)
10 20 30 40 50 60
pF1KSD MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN
:::::::::::::::::::::::
XP_005 FTKEPYLDEQRAVKYLWLAANNGPRGPAT
370 380
>>XP_011536018 (OMIM: 615741) PREDICTED: death ligand si (286 aa)
initn: 1761 init1: 1761 opt: 1764 Z-score: 1583.3 bits: 301.7 E(85289): 1.9e-81
Smith-Waterman score: 1764; 97.3% identity (98.5% similar) in 260 aa overlap (1-260:1-259)
10 20 30 40 50 60
pF1KSD MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA
::::::::::: . . .::
XP_011 QLSVSIAFNFL-VPVLGTGDTVIYKTKSLFSGSRKTIIEKQKENFRC
250 260 270 280
>>XP_006714875 (OMIM: 615741) PREDICTED: death ligand si (260 aa)
initn: 1729 init1: 1729 opt: 1729 Z-score: 1552.6 bits: 295.9 E(85289): 9.6e-80
Smith-Waterman score: 1729; 100.0% identity (100.0% similar) in 260 aa overlap (256-515:1-260)
230 240 250 260 270 280
pF1KSD TLSLEEAVTSIQQLFQLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGL
::::::::::::::::::::::::::::::
XP_006 MKSGDHTAAFSYFQKAAARGYSKAQYNAGL
10 20 30
290 300 310 320 330 340
pF1KSD CHEHGRGTPRDISKAVLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CHEHGRGTPRDISKAVLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQA
40 50 60 70 80 90
350 360 370 380 390 400
pF1KSD ADSGLREAQAFLGVLFTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ADSGLREAQAFLGVLFTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNL
100 110 120 130 140 150
410 420 430 440 450 460
pF1KSD GEALRCYQQSAALGNEAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GEALRCYQQSAALGNEAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAG
160 170 180 190 200 210
470 480 490 500 510
pF1KSD TSRLPHASSTGNLGLLCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TSRLPHASSTGNLGLLCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG
220 230 240 250 260
515 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 00:13:03 2016 done: Thu Nov 3 00:13:04 2016
Total Scan time: 10.480 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]