Result of FASTA (nr) for
pF1KSDA0111
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0111, 411 aa
1>>>pF1KSDA0111 411 - 411 aa - 411 aa
Library: nr
8900870272 residues in 25779625 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9606+/-0.000178; mu= 8.1598+/- 0.010
mean_var=72.2949+/-13.939, 0's: 33 Z-trim(120.2): 590 B-trim: 653 in 2/63
Lambda= 0.150841
statistics sampled from 60000 (127231) to 6179368 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.616), E-opt: 0.2 (0.242), width: 16
Scan time: 980.350
The best scores are: opt bits E(25779625)
gi|7661920|ref|NP_055555.1| eukaryotic initiation ( 411) 2659 588.0 4.3e-165
gi|60652753|gb|AAX29071.1| DEAD box polypeptide 48 ( 412) 2659 588.0 4.3e-165
gi|40788956|dbj|BAA04879.2| KIAA0111 [Homo sapiens ( 412) 2659 588.0 4.3e-165
gi|114794629|pdb|2HYI|C Chain C, Structure Of The ( 413) 2659 588.0 4.3e-165
gi|114051321|ref|NP_001039653.1| eukaryotic initia ( 411) 2654 586.9 9.1e-165
gi|114794876|pdb|2J0Q|A Chain A, The Crystal Struc ( 410) 2652 586.5 1.2e-164
gi|73964736|ref|XP_533130.2| PREDICTED: eukaryotic ( 411) 2649 585.8 1.9e-164
gi|332849248|ref|XP_511724.3| PREDICTED: eukaryoti ( 411) 2649 585.8 1.9e-164
gi|73620773|sp|Q4R3Q1.3|IF4A3_MACFA RecName: Full= ( 411) 2649 585.8 1.9e-164
gi|20149756|ref|NP_619610.1| eukaryotic initiation ( 411) 2648 585.6 2.3e-164
gi|343961095|dbj|BAK62137.1| probable ATP-dependen ( 411) 2644 584.7 4.1e-164
gi|496902|emb|CAA56074.1| translation initiation f ( 411) 2642 584.3 5.6e-164
gi|395517245|ref|XP_003762789.1| PREDICTED: eukary ( 411) 2641 584.1 6.5e-164
gi|26344810|dbj|BAC36054.1| unnamed protein produc ( 411) 2639 583.6 8.8e-164
gi|74142079|dbj|BAE41100.1| unnamed protein produc ( 411) 2639 583.6 8.8e-164
gi|395533289|ref|XP_003768693.1| PREDICTED: eukary ( 411) 2639 583.6 8.8e-164
gi|395826807|ref|XP_003786606.1| PREDICTED: eukary ( 421) 2627 581.0 5.5e-163
gi|440911177|gb|ELR60885.1| Eukaryotic initiation ( 407) 2626 580.8 6.2e-163
gi|334323012|ref|XP_001370945.2| PREDICTED: eukary ( 437) 2626 580.8 6.7e-163
gi|301772834|ref|XP_002921834.1| PREDICTED: LOW QU ( 417) 2622 579.9 1.2e-162
gi|343959972|dbj|BAK63843.1| probable ATP-dependen ( 411) 2619 579.3 1.8e-162
gi|350538331|ref|NP_001232328.1| eukaryotic initia ( 410) 2609 577.1 8.1e-162
gi|71897163|ref|NP_001025820.1| eukaryotic initiat ( 412) 2608 576.9 9.5e-162
gi|51712358|ref|XP_485792.1| PREDICTED: eukaryotic ( 411) 2601 575.4 2.7e-161
gi|281345231|gb|EFB20815.1| hypothetical protein P ( 404) 2595 574.1 6.6e-161
gi|327262701|ref|XP_003216162.1| PREDICTED: eukary ( 420) 2592 573.4 1.1e-160
gi|218505708|ref|NP_001136206.1| predicted gene, E ( 411) 2591 573.2 1.2e-160
gi|187957004|gb|AAI58084.1| EG434080 protein [Mus ( 411) 2577 570.2 1e-159
gi|251764758|sp|B7ZTW1.1|IF4A3_XENTR RecName: Full ( 415) 2577 570.2 1e-159
gi|166157858|ref|NP_001107349.1| eukaryotic initia ( 415) 2577 570.2 1e-159
gi|410917560|ref|XP_003972254.1| PREDICTED: eukary ( 406) 2569 568.4 3.3e-159
gi|432951240|ref|XP_004084765.1| PREDICTED: eukary ( 406) 2568 568.2 3.9e-159
gi|348544709|ref|XP_003459823.1| PREDICTED: eukary ( 406) 2567 568.0 4.5e-159
gi|387913798|gb|AFK10508.1| eukaryotic initiation ( 403) 2564 567.3 7e-159
gi|308322209|gb|ADO28242.1| eukaryotic initiation ( 406) 2559 566.2 1.5e-158
gi|82196760|sp|Q5U526.1|I4A3A_XENLA RecName: Full= ( 415) 2559 566.2 1.5e-158
gi|392878106|gb|AFM87885.1| eukaryotic initiation ( 403) 2558 566.0 1.7e-158
gi|225717006|gb|ACO14349.1| Eukaryotic initiation ( 406) 2545 563.2 1.2e-157
gi|41055130|ref|NP_957372.1| eukaryotic initiation ( 406) 2539 561.9 3.1e-157
gi|47209111|emb|CAF90069.1| unnamed protein produc ( 415) 2539 561.9 3.2e-157
gi|213511116|ref|NP_001134430.1| eukaryotic initia ( 406) 2538 561.7 3.6e-157
gi|114794619|pdb|2HXY|A Chain A, Crystal Structure ( 391) 2531 560.1 9.9e-157
gi|147902730|ref|NP_001084200.1| eukaryotic initia ( 414) 2530 559.9 1.2e-156
gi|296190482|ref|XP_002743273.1| PREDICTED: eukary ( 437) 2525 558.8 2.8e-156
gi|318054604|ref|NP_001187599.1| eukaryotic initia ( 389) 2481 549.3 1.9e-153
gi|126306068|ref|XP_001381369.1| PREDICTED: eukary ( 404) 2462 545.1 3.4e-152
gi|116668332|pdb|2J0U|A Chain A, The Crystal Struc ( 374) 2439 540.1 1e-150
gi|116668333|pdb|2J0U|B Chain B, The Crystal Struc ( 374) 2424 536.9 9.7e-150
gi|443716043|gb|ELU07720.1| hypothetical protein C ( 406) 2406 532.9 1.6e-148
gi|260790063|ref|XP_002590063.1| hypothetical prot ( 403) 2404 532.5 2.1e-148
>>gi|7661920|ref|NP_055555.1| eukaryotic initiation fact (411 aa)
initn: 2659 init1: 2659 opt: 2659 Z-score: 3129.5 bits: 588.0 E(25779625): 4.3e-165
Smith-Waterman score: 2659; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)
10 20 30 40 50 60
pF1KSD MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|766 MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|766 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|766 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|766 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|766 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|766 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
310 320 330 340 350 360
370 380 390 400 410
pF1KSD YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|766 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
370 380 390 400 410
>>gi|60652753|gb|AAX29071.1| DEAD box polypeptide 48 [sy (412 aa)
initn: 2659 init1: 2659 opt: 2659 Z-score: 3129.4 bits: 588.0 E(25779625): 4.3e-165
Smith-Waterman score: 2659; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)
10 20 30 40 50 60
pF1KSD MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|606 MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|606 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|606 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|606 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|606 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|606 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
310 320 330 340 350 360
370 380 390 400 410
pF1KSD YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|606 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLIL
370 380 390 400 410
>>gi|40788956|dbj|BAA04879.2| KIAA0111 [Homo sapiens] (412 aa)
initn: 2659 init1: 2659 opt: 2659 Z-score: 3129.4 bits: 588.0 E(25779625): 4.3e-165
Smith-Waterman score: 2659; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:2-412)
10 20 30 40 50
pF1KSD MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|407 IMATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KSD KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|407 KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KSD VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|407 VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KSD AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|407 AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI
190 200 210 220 230 240
240 250 260 270 280 290
pF1KSD LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|407 LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE
250 260 270 280 290 300
300 310 320 330 340 350
pF1KSD ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|407 ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE
310 320 330 340 350 360
360 370 380 390 400 410
pF1KSD LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|407 LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
370 380 390 400 410
>>gi|114794629|pdb|2HYI|C Chain C, Structure Of The Huma (413 aa)
initn: 2659 init1: 2659 opt: 2659 Z-score: 3129.4 bits: 588.0 E(25779625): 4.3e-165
Smith-Waterman score: 2659; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)
10 20 30 40 50 60
pF1KSD MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
310 320 330 340 350 360
370 380 390 400 410
pF1KSD YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLILE
370 380 390 400 410
>>gi|114051321|ref|NP_001039653.1| eukaryotic initiation (411 aa)
initn: 2654 init1: 2654 opt: 2654 Z-score: 3123.6 bits: 586.9 E(25779625): 9.1e-165
Smith-Waterman score: 2654; 99.8% identity (100.0% similar) in 411 aa overlap (1-411:1-411)
10 20 30 40 50 60
pF1KSD MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 MAATATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
310 320 330 340 350 360
370 380 390 400 410
pF1KSD YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
370 380 390 400 410
>>gi|114794876|pdb|2J0Q|A Chain A, The Crystal Structure (410 aa)
initn: 2652 init1: 2652 opt: 2652 Z-score: 3121.2 bits: 586.5 E(25779625): 1.2e-164
Smith-Waterman score: 2652; 100.0% identity (100.0% similar) in 410 aa overlap (2-411:1-410)
10 20 30 40 50 60
pF1KSD MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 ATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
10 20 30 40 50
70 80 90 100 110 120
pF1KSD PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
60 70 80 90 100 110
130 140 150 160 170 180
pF1KSD QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
120 130 140 150 160 170
190 200 210 220 230 240
pF1KSD IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KSD VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
240 250 260 270 280 290
310 320 330 340 350 360
pF1KSD NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
300 310 320 330 340 350
370 380 390 400 410
pF1KSD YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
360 370 380 390 400 410
>>gi|73964736|ref|XP_533130.2| PREDICTED: eukaryotic ini (411 aa)
initn: 2649 init1: 2649 opt: 2649 Z-score: 3117.7 bits: 585.8 E(25779625): 1.9e-164
Smith-Waterman score: 2649; 99.5% identity (100.0% similar) in 411 aa overlap (1-411:1-411)
10 20 30 40 50 60
pF1KSD MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
::..::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 MAAAATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
310 320 330 340 350 360
370 380 390 400 410
pF1KSD YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
370 380 390 400 410
>>gi|332849248|ref|XP_511724.3| PREDICTED: eukaryotic in (411 aa)
initn: 2649 init1: 2649 opt: 2649 Z-score: 3117.7 bits: 585.8 E(25779625): 1.9e-164
Smith-Waterman score: 2649; 99.8% identity (99.8% similar) in 411 aa overlap (1-411:1-411)
10 20 30 40 50 60
pF1KSD MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|332 MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|332 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|332 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|332 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|332 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|332 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
310 320 330 340 350 360
370 380 390 400 410
pF1KSD YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
::::::::::::::::::::::::::::::::::::::::::::::::::
gi|332 SIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
370 380 390 400 410
>>gi|73620773|sp|Q4R3Q1.3|IF4A3_MACFA RecName: Full=Euka (411 aa)
initn: 2649 init1: 2649 opt: 2649 Z-score: 3117.7 bits: 585.8 E(25779625): 1.9e-164
Smith-Waterman score: 2649; 99.5% identity (100.0% similar) in 411 aa overlap (1-411:1-411)
10 20 30 40 50 60
pF1KSD MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|736 MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
gi|736 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPARELAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
:::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|736 QIQKGLLTLGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|736 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|736 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|736 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
310 320 330 340 350 360
370 380 390 400 410
pF1KSD YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|736 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
370 380 390 400 410
>>gi|20149756|ref|NP_619610.1| eukaryotic initiation fac (411 aa)
initn: 2648 init1: 2648 opt: 2648 Z-score: 3116.5 bits: 585.6 E(25779625): 2.3e-164
Smith-Waterman score: 2648; 99.3% identity (100.0% similar) in 411 aa overlap (1-411:1-411)
10 20 30 40 50 60
pF1KSD MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
::..::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|201 MAANATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
:::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::
gi|201 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|201 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|201 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|201 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|201 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
310 320 330 340 350 360
370 380 390 400 410
pF1KSD YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|201 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
370 380 390 400 410
411 residues in 1 query sequences
8900870272 residues in 25779625 library sequences
Tcomplib [36.3.4 Apr, 2011] (6 proc)
start: Fri May 24 17:33:36 2013 done: Fri May 24 17:36:07 2013
Total Scan time: 980.350 Total Display time: -1.910
Function used was FASTA [36.3.4 Apr, 2011]