Result of FASTA (ccds) for
pF1KE9668
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE9668, 1362 aa
1>>>pF1KE9668 1362 - 1362 aa - 1362 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 17.2853+/-0.00132; mu= -27.7941+/- 0.080
mean_var=836.3888+/-171.581, 0's: 0 Z-trim(118.1): 145 B-trim: 198 in 2/51
Lambda= 0.044348
statistics sampled from 18800 (18939) to 18800 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.799), E-opt: 0.2 (0.582), width: 16
Scan time: 7.440
The best scores are: opt bits E(32554)
CCDS12328.1 BRD4 gene_id:23476|Hs108|chr19 (1362) 9465 621.8 4e-177
CCDS46004.1 BRD4 gene_id:23476|Hs108|chr19 ( 722) 4847 326.1 2.1e-88
CCDS82307.1 BRD4 gene_id:23476|Hs108|chr19 ( 794) 4848 326.2 2.2e-88
CCDS6980.1 BRD3 gene_id:8019|Hs108|chr9 ( 726) 1747 127.8 1.1e-28
CCDS56421.1 BRD2 gene_id:6046|Hs108|chr6 ( 754) 1101 86.5 3.1e-16
CCDS4762.1 BRD2 gene_id:6046|Hs108|chr6 ( 801) 1101 86.5 3.3e-16
CCDS56420.1 BRD2 gene_id:6046|Hs108|chr6 ( 836) 1101 86.5 3.4e-16
CCDS55616.1 BRDT gene_id:676|Hs108|chr1 ( 874) 961 77.6 1.7e-13
CCDS55615.1 BRDT gene_id:676|Hs108|chr1 ( 901) 961 77.6 1.8e-13
CCDS735.1 BRDT gene_id:676|Hs108|chr1 ( 947) 961 77.6 1.8e-13
CCDS72820.1 BRDT gene_id:676|Hs108|chr1 ( 951) 961 77.6 1.8e-13
>>CCDS12328.1 BRD4 gene_id:23476|Hs108|chr19 (1362 aa)
initn: 9465 init1: 9465 opt: 9465 Z-score: 3293.5 bits: 621.8 E(32554): 4e-177
Smith-Waterman score: 9465; 100.0% identity (100.0% similar) in 1362 aa overlap (1-1362:1-1362)
10 20 30 40 50 60
pF1KE9 MSAESGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MSAESGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 NQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 NQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 NAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 NAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 RGRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 RGRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 VVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 VVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 DPIHEPPSLPPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 DPIHEPPSLPPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE9 LKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE9 DVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPVVAVSSPAVPPPTKVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 DVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPVVAVSSPAVPPPTKVV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE9 APPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 APPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE9 KDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNSSNSNVSKKEPAPMKSKPPPTYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 KDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNSSNSNVSKKEPAPMKSKPPPTYE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE9 SEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 SEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE9 PSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESSSESSSSDSEDSETE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 PSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESSSESSSSDSEDSETE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE9 MAPKSKKKGHPGREQKKHHHHHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MAPKSKKKGHPGREQKKHHHHHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE9 PPPSMPQQAAPAMKSSPPPFIATQVPVLEPQLPGSVFDPIGHFTQPILHLPQPELPPHLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 PPPSMPQQAAPAMKSSPPPFIATQVPVLEPQLPGSVFDPIGHFTQPILHLPQPELPPHLP
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE9 QPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPARPPAVSPALTQTPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 QPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPARPPAVSPALTQTPLL
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE9 PQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQPPPPLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 PQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQPPPPLPP
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE9 PPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPMQFSTHIQQPPPPQGQQPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 PPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPMQFSTHIQQPPPPQGQQPP
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE9 HPPPGQQPPPPQPAKPQQVIQHHHSPRHHKSDPYSTGHLREAPSPLMIHSPQMSQFQSLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 HPPPGQQPPPPQPAKPQQVIQHHHSPRHHKSDPYSTGHLREAPSPLMIHSPQMSQFQSLT
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE9 HQSPPQQNVQPKKQELRAASVVQPQPLVVVKEEKIHSPIIRSEPFSPSLRPEPPKHPESI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 HQSPPQQNVQPKKQELRAASVVQPQPLVVVKEEKIHSPIIRSEPFSPSLRPEPPKHPESI
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE9 KAPVHLPQRPEMKPVDVGRPVIRPPEQNAPPPGAPDKDKQKQEPKTPVAPKKDLKIKNMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 KAPVHLPQRPEMKPVDVGRPVIRPPEQNAPPPGAPDKDKQKQEPKTPVAPKKDLKIKNMG
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE9 SWASLVQKHPTTPSSTAKSSSDSFEQFRRAAREKEEREKALKAQAEHAEKEKERLRQERM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 SWASLVQKHPTTPSSTAKSSSDSFEQFRRAAREKEEREKALKAQAEHAEKEKERLRQERM
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE9 RSREDEDALEQARRAHEEARRRQEQQQQQRQEQQQQQQQQAAAVAAAATPQAQSSQPQSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 RSREDEDALEQARRAHEEARRRQEQQQQQRQEQQQQQQQQAAAVAAAATPQAQSSQPQSM
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360
pF1KE9 LDQQRELARKREQERRRREAMAATIDMNFQSDLLSIFEENLF
::::::::::::::::::::::::::::::::::::::::::
CCDS12 LDQQRELARKREQERRRREAMAATIDMNFQSDLLSIFEENLF
1330 1340 1350 1360
>>CCDS46004.1 BRD4 gene_id:23476|Hs108|chr19 (722 aa)
initn: 4847 init1: 4847 opt: 4847 Z-score: 1700.5 bits: 326.1 E(32554): 2.1e-88
Smith-Waterman score: 4847; 100.0% identity (100.0% similar) in 719 aa overlap (1-719:1-719)
10 20 30 40 50 60
pF1KE9 MSAESGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MSAESGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 NQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 NQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 NAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 NAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 RGRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 RGRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 VVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 VVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 DPIHEPPSLPPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DPIHEPPSLPPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE9 LKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE9 DVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPVVAVSSPAVPPPTKVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPVVAVSSPAVPPPTKVV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE9 APPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 APPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE9 KDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNSSNSNVSKKEPAPMKSKPPPTYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 KDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNSSNSNVSKKEPAPMKSKPPPTYE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE9 SEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE9 PSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESSSESSSSDSEDSETE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESSSESSSSDSEDSETG
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE9 MAPKSKKKGHPGREQKKHHHHHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPP
CCDS46 PA
>>CCDS82307.1 BRD4 gene_id:23476|Hs108|chr19 (794 aa)
initn: 4847 init1: 4847 opt: 4848 Z-score: 1700.3 bits: 326.2 E(32554): 2.2e-88
Smith-Waterman score: 4848; 97.7% identity (98.1% similar) in 741 aa overlap (1-741:1-738)
10 20 30 40 50 60
pF1KE9 MSAESGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MSAESGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 NQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 NQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 NAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 NAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 RGRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 RGRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 VVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 VVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 DPIHEPPSLPPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 DPIHEPPSLPPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE9 LKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 LKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE9 DVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPVVAVSSPAVPPPTKVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 DVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPVVAVSSPAVPPPTKVV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE9 APPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 APPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE9 KDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNSSNSNVSKKEPAPMKSKPPPTYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 KDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNSSNSNVSKKEPAPMKSKPPPTYE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE9 SEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 SEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE9 PSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESSSESSSSDSEDSETE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 PSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESSSESSSSDSEDSETA
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE9 MAPKSKKKGHPGREQKKHHHHHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPP
. : :: . .: :
CCDS82 FCT-SGDFVSPG--PSPYHSHVQCGRFREMLRWFLVDVEQTAAGQPHRQSAAGPAITWAP
730 740 750 760 770
>>CCDS6980.1 BRD3 gene_id:8019|Hs108|chr9 (726 aa)
initn: 2726 init1: 939 opt: 1747 Z-score: 628.5 bits: 127.8 E(32554): 1.1e-28
Smith-Waterman score: 2537; 58.0% identity (74.8% similar) in 731 aa overlap (26-733:1-701)
10 20 30 40 50
pF1KE9 MSAESGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQ-PANAASTNPPPPETSNPNKPKRQ
:::. . : ::. . .::::::.:::.:: :.
CCDS69 MSTATTVAPAGIPATPGPVNPPPPEVSNPSKPGRK
10 20 30
60 70 80 90 100 110
pF1KE9 TNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYY
::::::. ::.:::::::::::: :::::.:::::::.::::.::::::::::::::::
CCDS69 TNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYY
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE9 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGR
:.:.::.:::::::::::::::: :::::::.::::.::::. ..: ::.:.. ::.
CCDS69 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGK
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE9 GRGRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVM
:: . .:. . :.. : ....: : : : :: :. :: .:. :::
CCDS69 GR-KPAAGAQSAGTQQVAAVSSVS--PATPF-QSVPPTVSQTP---------VIAATPVP
160 170 180 190 200
240 250 260 270 280 290
pF1KE9 TVVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTT
:.. : :::: ::: :: : :.. :: :: :::::::::::::::
CCDS69 TITANV---TSVPVPPAAAPPP-PATPIV----PVVPPTP-PVVKKKGVKRKADTTTPTT
210 220 230 240 250
300 310 320 330 340 350
pF1KE9 ID-PIHEPPSLPP--EPKTTKLGQRRESS-RPVKPPKKDVPDSQQHPAPEKSSKVSEQLK
. : :: .:: .:. ::::. ::.::::::. :.. :..:.::.:.
CCDS69 SAITASRSESPPPLSDPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLR
260 270 280 290 300 310
360 370 380 390 400 410
pF1KE9 CCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDA
:..::.::..:::::::::::::::.::: :::: ::::::::.::.: :...::: ::
CCDS69 YCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDA
320 330 340 350 360 370
420 430 440 450 460 470
pF1KE9 QEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPVVAVSSPAVPP
: :.:::::::::::::::::::::::::::::::::::::::::: : .::.:
CCDS69 QGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEP------VEAPALPA
380 390 400 410 420
480 490 500 510 520 530
pF1KE9 PTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNK
:. .. .. .: :. :.:::...::::::: ::::::::::::::::::::: ::
CCDS69 PAAPMVSKGAESSRSSEESSSDSGSSDSEEERATRLAELQEQLKAVHEQLAALSQAPVNK
430 440 450 460 470 480
540 550 560 570 580
pF1KE9 PKKK----EKDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKT---KKNNSSNSNVSKKEP
:::: ::.::.: :::.:.:..:. ....::: :: : :: ....: .
CCDS69 PKKKKEKKEKEKKKKDKEKEKEKHKVKAEEEKKAKVAPPAKQAQQKKAPAKKANSTTTAG
490 500 510 520 530 540
590 600 610 620 630 640
pF1KE9 APMKS---KPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK
.:. . .:.::::.. ::::.::::::::::.::::::::::::::::::::.
CCDS69 RQLKKGGKQASASYDSEEEEEGLPMSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLR
550 560 570 580 590 600
650 660 670 680 690
pF1KE9 NSNPDEIEIDFETLKPSTLRELERYVTSCLRKK-RKP-------QAEKVDVIAGSSKMKG
.:::::::::::::::.::::::::: :::.:: ::: :: : .. : :
CCDS69 DSNPDEIEIDFETLKPTTLRELERYVKSCLQKKQRKPFSASGKKQAAKSKEELAQEKKKE
610 620 630 640 650 660
700 710 720 730 740 750
pF1KE9 FSSSESESSSESSSSDSEDSETEMAPKSKKKGHPGREQKKHHHHHHQQMQQAPAPVPQQP
. . .. :.. ::: . . . : : .: :.:
CCDS69 LEKRLQDVSGQLSSSKKPARKEK--PGSAPSGGPSRLSSSSSSESGSSSSSGSSSDSSDS
670 680 690 700 710 720
760 770 780 790 800 810
pF1KE9 PPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFIATQVPVLEPQLPGSVF
CCDS69 E
>>CCDS56421.1 BRD2 gene_id:6046|Hs108|chr6 (754 aa)
initn: 2201 init1: 898 opt: 1101 Z-score: 404.9 bits: 86.5 E(32554): 3.1e-16
Smith-Waterman score: 2442; 56.2% identity (73.9% similar) in 729 aa overlap (44-724:13-708)
20 30 40 50 60 70
pF1KE9 LPVMGDGLETSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKT
::::::.:::.:: : ::::::: .::.:.
CCDS56 MASVPALQLTPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKA
10 20 30 40
80 90 100 110 120 130
pF1KE9 LWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMF
::::::::::.::::::::.::::.:::: ::::::::.:::::::: :.::.:::::::
CCDS56 LWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMF
50 60 70 80 90 100
140 150 160 170 180 190
pF1KE9 TNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRKETGTAKPGV
::::::::: :::::::..:::.::::. .: :: :.... :. . . .. . .:
CCDS56 TNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSV
110 120 130 140 150 160
200 210 220 230 240 250
pF1KE9 STVPNTTQASTPPQTQ--TPQPN-PPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTP
... .. .:. .: :: :. : : ::: ....:.. . :..
CCDS56 TSAHQVPAVSSVSHTALYTPPPEIPTTVLNIPHPS-------VISSPLL-----KSLHSA
170 180 190 200 210
260 270 280 290 300
pF1KE9 -PPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIHEP--P
::. ::: ::. :::::::::::::: : : :
CCDS56 GPPLLAVTAAPPA-----------------QPLAKKKGVKRKADTTTPTPT-AILAPGSP
220 230 240 250
310 320 330 340 350 360
pF1KE9 SLPP---EPKTTKLG-QRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKE
. :: :::...: .::::.::.:::.::.:::::. :..:.::::: :.:::::
CCDS56 ASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKHCNGILKE
260 270 280 290 300 310
370 380 390 400 410 420
pF1KE9 MFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVR
...:::::::::::::::. ::::::: ::::::::.::.: :.: :.:::::::.::::
CCDS56 LLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVR
320 330 340 350 360 370
430 440 450 460 470 480
pF1KE9 LMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPVVAVSSPAVPPP-TKVVAP
::::::::::::::.:::::::::::::.:.::::::: :: : :.:: .: .
CCDS56 LMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPLPVSTAMPPGLAKSSSE
380 390 400 410 420 430
490 500 510 520 530
pF1KE9 PSSSDSSSDSSSDSD------------SSTDDSEEERAQRLAELQEQLKAVHEQLAALSQ
:: .:::.:::. . : ..:::::::.:::::::::.:::::::::::
CCDS56 SSSEESSSESSSEEEEEEDEEDEEEEESESSDSEEERAHRLAELQEQLRAVHEQLAALSQ
440 450 460 470 480 490
540 550 560 570 580
pF1KE9 PQQNKPKKKEKDKKEKKK----EKHKRKEEVEENKKS-KAKEPP-PKKTKKNNSSNSNVS
.:::.: ..:::::: :::. . ..:. :. .: .:: :::.:: ..:... .
CCDS56 GPISKPKRK-REKKEKKKKRKAEKHRGRAGADEDDKGPRAPRPPQPKKSKKASGSGGGSA
500 510 520 530 540 550
590 600 610 620
pF1KE9 KKEPA---P------------MKSKPP--PT-YESEEEDKCKPMSYEEKRQLSLDINKLP
:. : :. :: :: :.::::.. .::::.:::::::::::::
CCDS56 ALGPSGFGPSGGSGTKLPKKATKTAPPALPTGYDSEEEEESRPMSYDEKRQLSLDINKLP
560 570 580 590 600 610
630 640 650 660 670 680
pF1KE9 GEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKK-RKPQAEK
::::::::::::.:::::..:::.::::::::::::::::::::: :::::: ::: . :
CCDS56 GEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYTIK
620 630 640 650 660 670
690 700 710 720 730 740
pF1KE9 VDVIAGSSKMKGFSSSESESSSESSSSDSEDSETEMAPKSKKKGHPGREQKKHHHHHHQQ
: :..: . .. : .. .. ... . :. ::
CCDS56 KPV--GKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKANEKTESSSAQQVAVSRLSA
680 690 700 710 720
750 760 770 780 790 800
pF1KE9 MQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFIATQV
CCDS56 SSSSSDSSSSSSSSSSSDTSDSDSG
730 740 750
>>CCDS4762.1 BRD2 gene_id:6046|Hs108|chr6 (801 aa)
initn: 2201 init1: 898 opt: 1101 Z-score: 404.6 bits: 86.5 E(32554): 3.3e-16
Smith-Waterman score: 2486; 54.8% identity (73.1% similar) in 767 aa overlap (5-724:27-755)
10 20 30
pF1KE9 MSAESGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQPA
..:: :.:. .. .:.:. :... : : ::
CCDS47 MLQNVTPHNKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLYEGFESPTMASVPAL-QLTPA
10 20 30 40 50
40 50 60 70 80 90
pF1KE9 NAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYY
::::::.:::.:: : ::::::: .::.:.::::::::::.::::::::.::::.
CCDS47 -----NPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYH
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE9 KIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFL
:::: ::::::::.:::::::: :.::.:::::::::::::::: :::::::..:::.::
CCDS47 KIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFL
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE9 QKINELPTEETEIMIVQAKGRGRGRKETGTAKPGVSTVPNTTQASTPPQTQ--TPQPN-P
::. .: :: :.... :. . . .. . .:... .. .:. .: :: :. :
CCDS47 QKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSVTSAHQVPAVSSVSHTALYTPPPEIP
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE9 PPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPII
: ::: ....:.. . .. ::. :::
CCDS47 TTVLNIPHPS-------VISSPLLKSLH----SAGPPLLAVTAAPPA-------------
240 250 260 270
280 290 300 310 320
pF1KE9 AATPQPVKTKKGVKRKADTTTPTTIDPIHEP--PSLPP---EPKTTKLG-QRRESSRPVK
::. :::::::::::::: : : :. :: :::...: .::::.::.:
CCDS47 ----QPLAKKKGVKRKADTTTPTPT-AILAPGSPASPPGSLEPKAARLPPMRRESGRPIK
280 290 300 310 320
330 340 350 360 370 380
pF1KE9 PPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHD
::.::.:::::. :..:.::::: :.:::::...:::::::::::::::. ::::::
CCDS47 PPRKDLPDSQQQHQSSKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHD
330 340 350 360 370 380
390 400 410 420 430 440
pF1KE9 YCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDV
: ::::::::.::.: :.: :.:::::::.::::::::::::::::::.:::::::::::
CCDS47 YHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV
390 400 410 420 430 440
450 460 470 480 490
pF1KE9 FEMRFAKMPDEPEEPVVAVSSPAVPPP-TKVVAPPSSSDSSSDSSSDSD-----------
::.:.::::::: :: : :.:: .: . :: .:::.:::. .
CCDS47 FEFRYAKMPDEPLEPGPLPVSTAMPPGLAKSSSESSSEESSSESSSEEEEEEDEEDEEEE
450 460 470 480 490 500
500 510 520 530 540 550
pF1KE9 -SSTDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKK----EKHK
: ..:::::::.:::::::::.::::::::::: .:::.: ..:::::: :::.
CCDS47 ESESSDSEEERAHRLAELQEQLRAVHEQLAALSQGPISKPKRK-REKKEKKKKRKAEKHR
510 520 530 540 550 560
560 570 580 590
pF1KE9 RKEEVEENKKS-KAKEPP-PKKTKKNNSSNSNVSKKEPA---P------------MKSKP
. ..:. :. .: .:: :::.:: ..:... . :. : :. :
CCDS47 GRAGADEDDKGPRAPRPPQPKKSKKASGSGGGSAALGPSGFGPSGGSGTKLPKKATKTAP
570 580 590 600 610 620
600 610 620 630 640 650
pF1KE9 P--PT-YESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEI
: :: :.::::.. .::::.:::::::::::::::::::::::::.:::::..:::.::
CCDS47 PALPTGYDSEEEEESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEI
630 640 650 660 670 680
660 670 680 690 700 710
pF1KE9 EIDFETLKPSTLRELERYVTSCLRKK-RKPQAEKVDVIAGSSKMKGFSSSESESSSESSS
::::::::::::::::::: :::::: ::: . : : :..: . .. : .. ..
CCDS47 EIDFETLKPSTLRELERYVLSCLRKKPRKPYTIKKPV--GKTKEELALEKKRELEKRLQD
690 700 710 720 730 740
720 730 740 750 760 770
pF1KE9 SDSEDSETEMAPKSKKKGHPGREQKKHHHHHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQ
... . :. ::
CCDS47 VSGQLNSTKKPPKKANEKTESSSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG
750 760 770 780 790 800
>>CCDS56420.1 BRD2 gene_id:6046|Hs108|chr6 (836 aa)
initn: 2267 init1: 898 opt: 1101 Z-score: 404.3 bits: 86.5 E(32554): 3.4e-16
Smith-Waterman score: 2420; 52.4% identity (70.1% similar) in 802 aa overlap (5-724:27-790)
10 20 30
pF1KE9 MSAESGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQPA
..:: :.:. .. .:.:. :... : : ::
CCDS56 MLQNVTPHNKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLYEGFESPTMASVPAL-QLTPA
10 20 30 40 50
40 50 60 70 80 90
pF1KE9 NAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYY
::::::.:::.:: : ::::::: .::.:.::::::::::.::::::::.::::.
CCDS56 -----NPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYH
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE9 KIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFL
:::: ::::::::.:::::::: :.::.:::::::::::::::: :::::::..:::.::
CCDS56 KIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFL
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE9 QKINELPTEETEIMIVQAKGRGRGRKETGTAKPGVSTVPNTTQASTPPQTQ--TPQPN-P
::. .: :: :.... :. . . .. . .:... .. .:. .: :: :. :
CCDS56 QKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSVTSAHQVPAVSSVSHTALYTPPPEIP
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE9 PPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPII
: ::: ....:.. . .. ::. :::
CCDS56 TTVLNIPHPS-------VISSPLLKSLH----SAGPPLLAVTAAPPA-------------
240 250 260 270
280 290 300 310 320
pF1KE9 AATPQPVKTKKGVKRKADTTTPTTIDPIHEP--PSLPP---EPKTTKLG-QRRESSRPVK
::. :::::::::::::: : : :. :: :::...: .::::.::.:
CCDS56 ----QPLAKKKGVKRKADTTTPTPT-AILAPGSPASPPGSLEPKAARLPPMRRESGRPIK
280 290 300 310 320
330 340 350 360 370 380
pF1KE9 PPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHD
::.::.:::::. :..:.::::: :.:::::...:::::::::::::::. ::::::
CCDS56 PPRKDLPDSQQQHQSSKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHD
330 340 350 360 370 380
390 400 410 420 430 440
pF1KE9 YCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDV
: ::::::::.::.: :.: :.:::::::.::::::::::::::::::.:::::::::::
CCDS56 YHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV
390 400 410 420 430 440
450 460 470 480 490
pF1KE9 FEMRFAKMPDEPEEPVVAVSSPAVPPP-TKVVAPPSSSDSSSDSSSDSD-----------
::.:.::::::: :: : :.:: .: . :: .:::.:::. .
CCDS56 FEFRYAKMPDEPLEPGPLPVSTAMPPGLAKSSSESSSEESSSESSSEEEEEEDEEDEEEE
450 460 470 480 490 500
500 510 520 530 540 550
pF1KE9 -SSTDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKK----EKHK
: ..:::::::.:::::::::.::::::::::: .:::.: ..:::::: :::.
CCDS56 ESESSDSEEERAHRLAELQEQLRAVHEQLAALSQGPISKPKRK-REKKEKKKKRKAEKHR
510 520 530 540 550 560
560 570 580
pF1KE9 RKEEVEENKKS-KAKEPP-PKKTKKNNSSNSNVSKKEPA---------------------
. ..:. :. .: .:: :::.:: ..:... . :.
CCDS56 GRAGADEDDKGPRAPRPPQPKKSKKASGSGGGSAALGPSGFGPSGGSGTKLQAGVQWRDL
570 580 590 600 610 620
590 600 610
pF1KE9 -----PM------------------------KSKPP--PT-YESEEEDKCKPMSYEEKRQ
:. :. :: :: :.::::.. .::::.::::
CCDS56 GLLQPPLLGFKRFSCLSLPSSQDYRLPKKATKTAPPALPTGYDSEEEEESRPMSYDEKRQ
630 640 650 660 670 680
620 630 640 650 660 670
pF1KE9 LSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRK
:::::::::::::::::::::.:::::..:::.::::::::::::::::::::: :::::
CCDS56 LSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRK
690 700 710 720 730 740
680 690 700 710 720 730
pF1KE9 K-RKPQAEKVDVIAGSSKMKGFSSSESESSSESSSSDSEDSETEMAPKSKKKGHPGREQK
: ::: . : : :..: . .. : .. .. ... . :. ::
CCDS56 KPRKPYTIKKPV--GKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKANEKTESSSAQ
750 760 770 780 790 800
740 750 760 770 780 790
pF1KE9 KHHHHHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSS
CCDS56 QVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG
810 820 830
>>CCDS55616.1 BRDT gene_id:676|Hs108|chr1 (874 aa)
initn: 1793 init1: 704 opt: 961 Z-score: 355.6 bits: 77.6 E(32554): 1.7e-13
Smith-Waterman score: 1628; 46.0% identity (65.5% similar) in 687 aa overlap (105-737:1-615)
80 90 100 110 120 130
pF1KE9 WKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFT
::..::::::::.:: .:.:::.::::::.
CCDS55 MDLNTIKKRLENKYYAKASECIEDFNTMFS
10 20 30
140 150 160 170 180 190
pF1KE9 NCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRKETGTAKPGVS
:::.::::::::::::.::::::.::....: :: ..: .: : : :.
CCDS55 NCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEE---QVVGVKER---------IKKGT-
40 50 60 70
200 210 220 230 240 250
pF1KE9 TVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVP
: : .: . :..: .. : . .: : .
CCDS55 -----------------QQNIAVSSAKEKSSPSATEKVFKQQEIPSVFPKTSI-------
80 90 100 110
260 270 280 290 300 310
pF1KE9 PQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLPPEPK
.: : . . ... ... ::::::::::::.: . .. . :
CCDS55 ---------SPLNVVQGASVNSSSQTAAQVTKGVKRKADTTTPAT-SAVKASSEFSP---
120 130 140 150 160
320 330 340 350 360 370
pF1KE9 TTKLGQRRESSRPVKP--PKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAY
. .. . :.: ::. .:::::. :. ::.:::. :: :::::.:::: .:
CCDS55 --TFTEKSVALPPIKENMPKNVLPDSQQQYNVVKTVKVTEQLRHCSEILKEMLAKKHFSY
170 180 190 200 210
380 390 400 410 420 430
pF1KE9 AWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKY
:::::.::::.:::::.: :..:.:::..::: :.. .::.:: .:.::::::: :::::
CCDS55 AWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKY
220 230 240 250 260 270
440 450 460 470 480 490
pF1KE9 NPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPVVAVSSPAVPPPTKVVAPPSSSDSSSDS
::::::::.::: :::::: .:.:.: :: : : : : .. .. ......
CCDS55 NPPDHEVVTMARMLQDVFETHFSKIPIEPVE-----SMPLCYIKTDITET-TGRENTNEA
280 290 300 310 320 330
500 510 520 530 540 550
pF1KE9 SSDSDSSTDDSEEERAQRLAELQEQLKAVHEQLAALSQ-PQQNKPKKKEKDKKEKKKEKH
::...:: ::::.::..:::.:::::::::.:: .::: : .. :::::.::::::::
CCDS55 SSEGNSS-DDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRKLNKKKEKSKKEKKKEKV
340 350 360 370 380 390
560 570 580 590 600 610
pF1KE9 KRKEEVEENKKSKAKEPPPKKTKKNNSSNSNVSKKEPAPMKSKPPPTYESEEEDKCKPMS
. ..: . .: . .:.:.:. .. :.. .:: :.::. :::.
CCDS55 NNSNE--NPRKMCEQMRLKEKSKRNQPKKR---KQQFIGLKS--------EDEDNAKPMN
400 410 420 430
620 630 640 650 660 670
pF1KE9 YEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYV
:.:::::::.::::::.::::::::::::::::.::::::::::::::: :::::::.::
CCDS55 YDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLRELEKYV
440 450 460 470 480 490
680
pF1KE9 TSCLRKKR-KPQAEKV--------------------DV---------------------I
..::::. :: :.:. :: .
CCDS55 SACLRKRPLKPPAKKIMMSKEELHSQKKQELEKRLLDVNNQLNSRKRQTKSDKTQPSKAV
500 510 520 530 540 550
690 700 710 720 730 740
pF1KE9 AGSSKMK-----GFSSSESESSSES-SSSDSEDSETEMAPK---SKKKGHPGREQKKHHH
. :... . ::::::::: . ::::: :::.:: :: : . :..:. :
CCDS55 ENVSRLSESSSSSSSSSESESSSSDLSSSDSSDSESEMFPKFTEVKPNDSPSKENVKKMK
560 570 580 590 600 610
750 760 770 780 790 800
pF1KE9 HHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPF
CCDS55 NECIPPEGRTGVTQIGYCVQDTTSANTTLVHQTTPSHVMPPNHHQLAFNYQELEHLQTVK
620 630 640 650 660 670
>>CCDS55615.1 BRDT gene_id:676|Hs108|chr1 (901 aa)
initn: 1850 init1: 704 opt: 961 Z-score: 355.5 bits: 77.6 E(32554): 1.8e-13
Smith-Waterman score: 1599; 43.3% identity (61.2% similar) in 757 aa overlap (35-737:4-642)
10 20 30 40 50 60
pF1KE9 SGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQTNQLQ
:. .: .:::::: : .: : :::::
CCDS55 MSLPSRQTAIIVNPPPPEYINTKKNGRLTNQLQ
10 20 30
70 80 90 100 110 120
pF1KE9 YLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQE
:: .:::: ::::.:.::::.:::::::.::
CCDS55 YLQKVVLKDLWKHSFSWPFQRPVDAVKLQLP-----------------------------
40 50 60
130 140 150 160 170 180
pF1KE9 CIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK
:::::::::.::::::.::....: :: ..: .: :
CCDS55 -----------------PGDDIVLMAQALEKLFMQKLSQMPQEE---QVVGVKER-----
70 80 90
190 200 210 220 230 240
pF1KE9 ETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPP
: :. : : .: . :..: .. : . .: :
CCDS55 ----IKKGT------------------QQNIAVSSAKEKSSPSATEKVFKQQEIPSVFPK
100 110 120 130
250 260 270 280 290 300
pF1KE9 QPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIH
. .: : . . ... ... ::::::::::::.: . ..
CCDS55 TSI----------------SPLNVVQGASVNSSSQTAAQVTKGVKRKADTTTPAT-SAVK
140 150 160 170 180
310 320 330 340 350 360
pF1KE9 EPPSLPPEPKTTKLGQRRESSRPVKP--PKKDVPDSQQHPAPEKSSKVSEQLKCCSGILK
. : . .. . :.: ::. .:::::. :. ::.:::. :: :::
CCDS55 ASSEFSPT-----FTEKSVALPPIKENMPKNVLPDSQQQYNVVKTVKVTEQLRHCSEILK
190 200 210 220 230
370 380 390 400 410 420
pF1KE9 EMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADV
::.:::: .::::::.::::.:::::.: :..:.:::..::: :.. .::.:: .:.:::
CCDS55 EMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADV
240 250 260 270 280 290
430 440 450 460 470 480
pF1KE9 RLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPVVAVSSPAVPPPTKVVAP
:::: :::::::::::::.::: :::::: .:.:.: :: : : : : ..
CCDS55 RLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVE-----SMPLCYIKTDITET
300 310 320 330 340 350
490 500 510 520 530 540
pF1KE9 PSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKAVHEQLAALSQ-PQQNKPKKKEK
.. ......::...:: ::::.::..:::.:::::::::.:: .::: : .. :::::
CCDS55 -TGRENTNEASSEGNSS-DDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRKLNKKKEK
360 370 380 390 400
550 560 570 580 590 600
pF1KE9 DKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNSSNSNVSKKEPAPMKSKPPPTYES
.:::::::: . ..: . .: . .:.:.:. .. :.. .::
CCDS55 SKKEKKKEKVNNSNE--NPRKMCEQMRLKEKSKRNQPKK---RKQQFIGLKS--------
410 420 430 440 450
610 620 630 640 650 660
pF1KE9 EEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKP
:.::. :::.:.:::::::.::::::.::::::::::::::::.:::::::::::::::
CCDS55 EDEDNAKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKA
460 470 480 490 500 510
670 680
pF1KE9 STLRELERYVTSCLRKKR-KPQAEKV--------------------DV------------
:::::::.::..::::. :: :.:. ::
CCDS55 STLRELEKYVSACLRKRPLKPPAKKIMMSKEELHSQKKQELEKRLLDVNNQLNSRKRQTK
520 530 540 550 560 570
690 700 710 720 730
pF1KE9 ---------IAGSSKMK-----GFSSSESESSSES-SSSDSEDSETEMAPK---SKKKGH
. . :... . ::::::::: . ::::: :::.:: :: : .
CCDS55 SDKTQPSKAVENVSRLSESSSSSSSSSESESSSSDLSSSDSSDSESEMFPKFTEVKPNDS
580 590 600 610 620 630
740 750 760 770 780 790
pF1KE9 PGREQKKHHHHHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAA
:..:. :
CCDS55 PSKENVKKMKNECIPPEGRTGVTQIGYCVQDTTSANTTLVHQTTPSHVMPPNHHQLAFNY
640 650 660 670 680 690
>>CCDS735.1 BRDT gene_id:676|Hs108|chr1 (947 aa)
initn: 2120 init1: 704 opt: 961 Z-score: 355.2 bits: 77.6 E(32554): 1.8e-13
Smith-Waterman score: 1955; 48.0% identity (67.0% similar) in 757 aa overlap (35-737:4-688)
10 20 30 40 50 60
pF1KE9 SGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQTNQLQ
:. .: .:::::: : .: : :::::
CCDS73 MSLPSRQTAIIVNPPPPEYINTKKNGRLTNQLQ
10 20 30
70 80 90 100 110 120
pF1KE9 YLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQE
:: .:::: ::::.:.::::.:::::::.::::: :::.:::..::::::::.:: .:.:
CCDS73 YLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASE
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE9 CIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK
::.::::::.:::.::::::::::::.::::::.::....: :: ..: .: :
CCDS73 CIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEE---QVVGVKER-----
100 110 120 130 140
190 200 210 220 230 240
pF1KE9 ETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPP
: :. : : .: . :..: .. : . .: :
CCDS73 ----IKKGT------------------QQNIAVSSAKEKSSPSATEKVFKQQEIPSVFPK
150 160 170 180
250 260 270 280 290 300
pF1KE9 QPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIH
. .: : . . ... ... ::::::::::::.: . ..
CCDS73 TSI----------------SPLNVVQGASVNSSSQTAAQVTKGVKRKADTTTPAT-SAVK
190 200 210 220
310 320 330 340 350 360
pF1KE9 EPPSLPPEPKTTKLGQRRESSRPVKP--PKKDVPDSQQHPAPEKSSKVSEQLKCCSGILK
. : . .. . :.: ::. .:::::. :. ::.:::. :: :::
CCDS73 ASSEFSPT-----FTEKSVALPPIKENMPKNVLPDSQQQYNVVKTVKVTEQLRHCSEILK
230 240 250 260 270 280
370 380 390 400 410 420
pF1KE9 EMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADV
::.:::: .::::::.::::.:::::.: :..:.:::..::: :.. .::.:: .:.:::
CCDS73 EMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADV
290 300 310 320 330 340
430 440 450 460 470 480
pF1KE9 RLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPVVAVSSPAVPPPTKVVAP
:::: :::::::::::::.::: :::::: .:.:.: :: : : : : ..
CCDS73 RLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVE-----SMPLCYIKTDITET
350 360 370 380 390
490 500 510 520 530 540
pF1KE9 PSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKAVHEQLAALSQ-PQQNKPKKKEK
.. ......::...:: ::::.::..:::.:::::::::.:: .::: : .. :::::
CCDS73 -TGRENTNEASSEGNSS-DDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRKLNKKKEK
400 410 420 430 440 450
550 560 570 580 590 600
pF1KE9 DKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNSSNSNVSKKEPAPMKSKPPPTYES
.:::::::: . ..: . .: . .:.:.:. .. :.. .::
CCDS73 SKKEKKKEKVNNSNE--NPRKMCEQMRLKEKSKRNQPKK---RKQQFIGLKS--------
460 470 480 490 500
610 620 630 640 650 660
pF1KE9 EEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKP
:.::. :::.:.:::::::.::::::.::::::::::::::::.:::::::::::::::
CCDS73 EDEDNAKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKA
510 520 530 540 550 560
670 680
pF1KE9 STLRELERYVTSCLRKKR-KPQAEKV--------------------DV------------
:::::::.::..::::. :: :.:. ::
CCDS73 STLRELEKYVSACLRKRPLKPPAKKIMMSKEELHSQKKQELEKRLLDVNNQLNSRKRQTK
570 580 590 600 610 620
690 700 710 720 730
pF1KE9 ---------IAGSSKMK-----GFSSSESESSSES-SSSDSEDSETEMAPK---SKKKGH
. . :... . ::::::::: . ::::: :::.:: :: : .
CCDS73 SDKTQPSKAVENVSRLSESSSSSSSSSESESSSSDLSSSDSSDSESEMFPKFTEVKPNDS
630 640 650 660 670 680
740 750 760 770 780 790
pF1KE9 PGREQKKHHHHHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAA
:..:. :
CCDS73 PSKENVKKMKNECIPPEGRTGVTQIGYCVQDTTSANTTLVHQTTPSHVMPPNHHQLAFNY
690 700 710 720 730 740
1362 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Dec 21 11:12:58 2016 done: Wed Dec 21 11:12:59 2016
Total Scan time: 7.440 Total Display time: 0.390
Function used was FASTA [36.3.4 Apr, 2011]