Result of FASTA (ccds) for
pF1KE9279
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE9279, 290 aa
1>>>pF1KE9279 290 - 290 aa - 290 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9487+/-0.00101; mu= 16.9338+/- 0.061
mean_var=58.9232+/-11.348, 0's: 0 Z-trim(103.9): 20 B-trim: 44 in 1/49
Lambda= 0.167082
statistics sampled from 7624 (7637) to 7624 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.605), E-opt: 0.2 (0.235), width: 16
Scan time: 2.130
The best scores are: opt bits E(32554)
CCDS32550.1 ATP1B2 gene_id:482|Hs108|chr17 ( 290) 2000 490.5 5.9e-139
CCDS48158.1 ATP1B4 gene_id:23439|Hs108|chrX ( 357) 814 204.7 8e-53
CCDS9539.1 ATP4B gene_id:496|Hs108|chr13 ( 291) 785 197.7 8.6e-51
CCDS14598.1 ATP1B4 gene_id:23439|Hs108|chrX ( 353) 776 195.5 4.6e-50
CCDS3121.1 ATP1B3 gene_id:483|Hs108|chr3 ( 279) 597 152.3 3.7e-37
CCDS1276.1 ATP1B1 gene_id:481|Hs108|chr1 ( 303) 512 131.9 5.8e-31
>>CCDS32550.1 ATP1B2 gene_id:482|Hs108|chr17 (290 aa)
initn: 2000 init1: 2000 opt: 2000 Z-score: 2608.2 bits: 490.5 E(32554): 5.9e-139
Smith-Waterman score: 2000; 100.0% identity (100.0% similar) in 290 aa overlap (1-290:1-290)
10 20 30 40 50 60
pF1KE9 MVIQKEKKSCGQVVEEWKEFVWNPRTHQFMGRTGTSWAFILLFYLVFYGFLTAMFTLTMW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MVIQKEKKSCGQVVEEWKEFVWNPRTHQFMGRTGTSWAFILLFYLVFYGFLTAMFTLTMW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 VMLQTVSDHTPKYQDRLATPGLMIRPKTENLDVIVNVSDTESWDQHVQKLNKFLEPYNDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 VMLQTVSDHTPKYQDRLATPGLMIRPKTENLDVIVNVSDTESWDQHVQKLNKFLEPYNDS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 IQAQKNDVCRPGRYYEQPDNGVLNYPKRACQFNRTQLGNCSGIGDSTHYGYSTGQPCVFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 IQAQKNDVCRPGRYYEQPDNGVLNYPKRACQFNRTQLGNCSGIGDSTHYGYSTGQPCVFI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 KMNRVINFYAGANQSMNVTCAGKRDEDAENLGNFVMFPANGNIDLMYFPYYGKKFHVNYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 KMNRVINFYAGANQSMNVTCAGKRDEDAENLGNFVMFPANGNIDLMYFPYYGKKFHVNYT
190 200 210 220 230 240
250 260 270 280 290
pF1KE9 QPLVAVKFLNVTPNVEVNVECRINAANIATDDERDKFAGRVAFKLRINKT
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 QPLVAVKFLNVTPNVEVNVECRINAANIATDDERDKFAGRVAFKLRINKT
250 260 270 280 290
>>CCDS48158.1 ATP1B4 gene_id:23439|Hs108|chrX (357 aa)
initn: 720 init1: 338 opt: 814 Z-score: 1061.8 bits: 204.7 E(32554): 8e-53
Smith-Waterman score: 814; 42.0% identity (75.0% similar) in 276 aa overlap (12-287:84-355)
10 20 30 40
pF1KE9 MVIQKEKKSCGQVVEEWKEFVWNPRTHQFMGRTGTSWAFIL
: .. .:..:.:. ..:..::: ::..::
CCDS48 EEEEEEKEEEEEEEKEEEEGQGQPTGNAWWQKLQIMSEYLWDPERRMFLARTGQSWSLIL
60 70 80 90 100 110
50 60 70 80 90 100
pF1KE9 LFYLVFYGFLTAMFTLTMWVMLQTVSDHTPKYQDRLATPGLMIRPKTENLDVIVNVSDTE
:.:. ::. :.:..:: :.... :.: . : . .:. ::.:::: ...:. :::. .
CCDS48 LIYFFFYASLAAVITLCMYTLFLTISPYIPTFTERVKPPGVMIRPFAHSLNFNFNVSEPD
120 130 140 150 160 170
110 120 130 140 150 160
pF1KE9 SWDQHVQKLNKFLEPYNDSIQAQKNDVCRPGRYYEQPDNGVLNYPKRACQFNRTQLGNCS
.:...: .:: ::. ::::.: . : : ::.:. : .: . :.::::.:. : :::
CCDS48 TWQHYVISLNGFLQGYNDSLQEEMNVDCPPGQYFIQ--DGNEDEDKKACQFKRSFLKNCS
180 190 200 210 220 230
170 180 190 200 210 220
pF1KE9 GIGDSTHYGYSTGQPCVFIKMNRVINFYAGANQSMNVTCAGKRDEDAENLGNFVMFPANG
:. : : .::::::::...::::...: .. ..:.: .: : ... .. ..: ..
CCDS48 GLEDPT-FGYSTGQPCILLKMNRIVGFRPELGDPVKVSCKVQRG-DENDIRSISYYPESA
240 250 260 270 280
230 240 250 260 270 280
pF1KE9 NIDLMYFPYYGKKFHVNYTQPLVAVKFLNVTPNVEVNVECRINAANIATDDERDKFAGRV
..:: :.::::: :::::.::::..: .:. : : :.:.... .. .: :.:.:::
CCDS48 SFDLRYYPYYGKLTHVNYTSPLVAMHFTDVVKNQAVPVQCQLKGKGVINDVINDRFVGRV
290 300 310 320 330 340
290
pF1KE9 AFKLRINKT
: : :
CCDS48 IFTLNIET
350
>>CCDS9539.1 ATP4B gene_id:496|Hs108|chr13 (291 aa)
initn: 704 init1: 314 opt: 785 Z-score: 1025.3 bits: 197.7 E(32554): 8.6e-51
Smith-Waterman score: 785; 39.5% identity (72.6% similar) in 296 aa overlap (1-289:1-291)
10 20 30 40 50 60
pF1KE9 MVIQKEKKSCGQVVEEWKEFVWNPRTHQFMGRTGTSWAFILLFYLVFYGFLTAMFTLTMW
:. .:::.::: .::.... ::: : :..::: . :..: :.:..:: .:..:.: ..
CCDS95 MAALQEKKTCGQRMEEFQRYCWNPDTGQMLGRTLSRWVWISLYYVAFYVVMTGLFALCLY
10 20 30 40 50 60
70 80 90 100 110
pF1KE9 VMLQTVSDHTPKYQDRLATPGLMIRPKT---ENLDVIVNVSDTESWDQHVQKLNKFLEPY
:..:::. .:: :::.: .::. .:: . ..:... ::::...: . .: :. :: :
CCDS95 VLMQTVDPYTPDYQDQLRSPGVTLRPDVYGEKGLEIVYNVSDNRTWADLTQTLHAFLAGY
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE9 NDSIQAQKNDV-CRPGRYYEQPDNGVLNYPKRACQFNRTQLGNCSGIGDSTHYGYSTGQP
: ::.... : .:. : . . :. : .:.:. .: ::::..: ..:. :.:
CCDS95 --SPAAQEDSINCTSEQYFFQESFRAPNHTKFSCKFTADMLQNCSGLADP-NFGFEEGKP
130 140 150 160 170
180 190 200 210 220 230
pF1KE9 CVFIKMNRVINFYAGANQSMNVTCAGKRDEDAENLGNFVM---FPANGNIDLMYFPYYGK
: .:::::...: . ... : :: :. : ::. .. .: ::...: :::::::
CCDS95 CFIIKMNRIVKFLPSNGSAPRVDCAFL-DQPRE-LGQPLQVKYYPPNGTFSLHYFPYYGK
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE9 KFHVNYTQPLVAVKFLNVTPNVEVNVECRINAANIATDDERDKFAGRVAFKLRINKT
: . .:..::::.:.::. :.:: . :.. : ... .. .: . :.: :::.:.:
CCDS95 KAQPHYSNPLVAAKLLNIPRNAEVAIVCKVMAEHVTFNNPHDPYEGKVEFKLKIEK
240 250 260 270 280 290
>>CCDS14598.1 ATP1B4 gene_id:23439|Hs108|chrX (353 aa)
initn: 742 init1: 297 opt: 776 Z-score: 1012.3 bits: 195.5 E(32554): 4.6e-50
Smith-Waterman score: 776; 41.3% identity (73.9% similar) in 276 aa overlap (12-287:84-351)
10 20 30 40
pF1KE9 MVIQKEKKSCGQVVEEWKEFVWNPRTHQFMGRTGTSWAFIL
: .. .:..:.:. ..:..::: .::
CCDS14 EEEEEEKEEEEEEEKEEEEGQGQPTGNAWWQKLQIMSEYLWDPERRMFLARTG----LIL
60 70 80 90 100
50 60 70 80 90 100
pF1KE9 LFYLVFYGFLTAMFTLTMWVMLQTVSDHTPKYQDRLATPGLMIRPKTENLDVIVNVSDTE
:.:. ::. :.:..:: :.... :.: . : . .:. ::.:::: ...:. :::. .
CCDS14 LIYFFFYASLAAVITLCMYTLFLTISPYIPTFTERVKPPGVMIRPFAHSLNFNFNVSEPD
110 120 130 140 150 160
110 120 130 140 150 160
pF1KE9 SWDQHVQKLNKFLEPYNDSIQAQKNDVCRPGRYYEQPDNGVLNYPKRACQFNRTQLGNCS
.:...: .:: ::. ::::.: . : : ::.:. : .: . :.::::.:. : :::
CCDS14 TWQHYVISLNGFLQGYNDSLQEEMNVDCPPGQYFIQ--DGNEDEDKKACQFKRSFLKNCS
170 180 190 200 210 220
170 180 190 200 210 220
pF1KE9 GIGDSTHYGYSTGQPCVFIKMNRVINFYAGANQSMNVTCAGKRDEDAENLGNFVMFPANG
:. : : .::::::::...::::...: .. ..:.: .: : ... .. ..: ..
CCDS14 GLEDPT-FGYSTGQPCILLKMNRIVGFRPELGDPVKVSCKVQRG-DENDIRSISYYPESA
230 240 250 260 270 280
230 240 250 260 270 280
pF1KE9 NIDLMYFPYYGKKFHVNYTQPLVAVKFLNVTPNVEVNVECRINAANIATDDERDKFAGRV
..:: :.::::: :::::.::::..: .:. : : :.:.... .. .: :.:.:::
CCDS14 SFDLRYYPYYGKLTHVNYTSPLVAMHFTDVVKNQAVPVQCQLKGKGVINDVINDRFVGRV
290 300 310 320 330 340
290
pF1KE9 AFKLRINKT
: : :
CCDS14 IFTLNIET
350
>>CCDS3121.1 ATP1B3 gene_id:483|Hs108|chr3 (279 aa)
initn: 817 init1: 385 opt: 597 Z-score: 780.7 bits: 152.3 E(32554): 3.7e-37
Smith-Waterman score: 863; 47.6% identity (73.6% similar) in 288 aa overlap (4-285:3-275)
10 20 30 40 50 60
pF1KE9 MVIQKEKKSCGQVVEEWKEFVWNPRTHQFMGRTGTSWAFILLFYLVFYGFLTAMFTLTMW
..:::: .: . ::: :..:: : .:.:::. ::..::::::::::::.:.:..:::
CCDS31 MTKNEKKSLNQSLAEWKLFIYNPTTGEFLGRTAKSWGLILLFYLVFYGFLAALFSFTMW
10 20 30 40 50
70 80 90 100 110
pF1KE9 VMLQTVSDHTPKYQDRLATPGLMIRPK-TENLDVIVNVSDTESWDQHVQKLNKFLEPYND
:::::..:..:::.:.. .::::. :: . :. . :: :. ... :.:::.::
CCDS31 VMLQTLNDEVPKYRDQIPSPGLMVFPKPVTALEYTFSRSDPTSYAGYIEDLKKFLKPY--
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 SIQAQKN-DVCRPGRYYEQPDNGVLNYPKRACQFNRTQLGNCSGIGDSTHYGYSTGQPCV
... ::: :: : .:: .: . :::: . : :::..: .::: :.::.
CCDS31 TLEEQKNLTVCPDGALFEQ--KGPVYV---ACQFPISLLQACSGMNDPD-FGYSQGNPCI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 FIKMNRVINFYAGANQSMNVTCAGKRDEDAENLGNFVMFPANGNIDLMYFPYYGKKFHVN
..::::.:.. . .. :..: :.. : ...: :: ::: ::::::::.::.
CCDS31 LVKMNRIIGLKPEGVPRID--CVSKN----EDIPNVAVYPHNGMIDLKYFPYYGKKLHVG
180 190 200 210 220
240 250 260 270 280 290
pF1KE9 YTQPLVAVKFLNVTPNV---EVNVECRIN-AANIATDDERDKFAGRVAFKLRINKT
: ::::::. .. .:: ::.:::.:. .::. ..:.:::: ::: ::.
CCDS31 YLQPLVAVQ-VSFAPNNTGKEVTVECKIDGSANLKSQDDRDKFLGRVMFKITARA
230 240 250 260 270
>>CCDS1276.1 ATP1B1 gene_id:481|Hs108|chr1 (303 aa)
initn: 661 init1: 347 opt: 512 Z-score: 669.4 bits: 131.9 E(32554): 5.8e-31
Smith-Waterman score: 729; 39.9% identity (67.0% similar) in 303 aa overlap (11-287:4-301)
10 20 30 40 50
pF1KE9 MVIQKEKKSCGQVVEE--WKEFVWNPRTHQFMGRTGTSWAFILLFYLVFYGFLTAMFTLT
:.. :: ::.:.:: . ..:.:::: :: :::::..::: :...: :
CCDS12 MARGKAKEEGSWKKFIWNSEKKEFLGRTGGSWFKILLFYVIFYGCLAGIFIGT
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 MWVMLQTVSDHTPKYQDRLATPGLMIRPKTENLDVIVNVSDTESWDQHVQKLNKFLEPYN
. ::: :.:. : ::::.: ::: :. .. .. .: .:.. .: .. .::: :.
CCDS12 IQVMLLTISEFKPTYQDRVAPPGLTQIPQIQKTEISFRPNDPKSYEAYVLNIVRFLEKYK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 DSIQAQKNDV----CR--PGRYYEQPDNGVLNYPKRACQFNRTQLGNCSGIGDSTHYGYS
:: ::..:. : :.. :. : . ...:.:. ::::::..: : :::.
CCDS12 DS--AQRDDMIFEDCGDVPSEPKERGDFNHERGERKVCRFKLEWLGNCSGLNDET-YGYK
120 130 140 150 160 170
180 190 200 210
pF1KE9 TGQPCVFIKMNRVINFYAGA--NQSMN-------------VTCAGKRDEDAENLGNFVMF
:.::..::.:::..: :.:.. : :.:::::: ...:: .:
CCDS12 EGKPCIIIKLNRVLGFKPKPPKNESLETYPVMKYNPNVLPVQCTGKRDEDKDKVGNVEYF
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE9 PANGN---IDLMYFPYYGKKFHVNYTQPLVAVKFLNVTPNVEVNVECRINAANIATDDER
:: . :.:.::::: .. .: :::.::.: :.: ..:. .::. . ::. . :.
CCDS12 GL-GNSPGFPLQYYPYYGKLLQPKYLQPLLAVQFTNLTMDTEIRIECKAYGENIGYS-EK
240 250 260 270 280
280 290
pF1KE9 DKFAGRVAFKLRINKT
:.: :: :...
CCDS12 DRFQGRFDVKIEVKS
290 300
290 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 12:06:20 2016 done: Thu Nov 3 12:06:21 2016
Total Scan time: 2.130 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]