Result of FASTA (ccds) for
pF1KE4538
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4538, 620 aa
1>>>pF1KE4538 620 - 620 aa - 620 aa
Library: human.CCDS.faa
18921897 residues in 33420 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.9610+/-0.00106; mu= 2.9459+/- 0.063
mean_var=197.8535+/-41.071, 0's: 0 Z-trim(109.4): 53 B-trim: 69 in 1/52
Lambda= 0.091181
statistics sampled from 10953 (10991) to 10953 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.68), E-opt: 0.2 (0.329), width: 16
Scan time: 1.750
The best scores are: opt bits E(33420)
CCDS32334.1 PRC1 gene_id:9055|Hs109|chr15 ( 620) 4020 541.8 1e-153
CCDS45352.1 PRC1 gene_id:9055|Hs109|chr15 ( 606) 3810 514.2 2e-145
CCDS45353.2 PRC1 gene_id:9055|Hs109|chr15 ( 525) 3064 416.0 6.3e-116
>>CCDS32334.1 PRC1 gene_id:9055|Hs109|chr15 (620 aa)
initn: 4020 init1: 4020 opt: 4020 Z-score: 2873.6 bits: 541.8 E(33420): 1e-153
Smith-Waterman score: 4020; 99.8% identity (99.8% similar) in 620 aa overlap (1-620:1-620)
10 20 30 40 50 60
pF1KE4 MRRSEVLAEESIVCLQKALNHLREIWELIGIPEDQRLQRTEVVKKHIKELLDMMIAEEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MRRSEVLAEESIVCLQKALNHLREIWELIGIPEDQRLQRTEVVKKHIKELLDMMIAEEES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 LKERLIKSISVCQKELNTLCSELHVEPFQEEGETTILQLEKDLRTQVELMRKQKKERKQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LKERLIKSISVCQKELNTLCSELHVEPFQEEGETTILQLEKDLRTQVELMRKQKKERKQE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 LKLLQEQDQELCEILCMPHYDIDSASVPSLEELNQFRQHVTTLRETKASRREEFVSIKRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LKLLQEQDQELCEILCMPHYDIDSASVPSLEELNQFRQHVTTLRETKASRREEFVSIKRQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 IILCMEELDHTPDTSFERDVVCEDEDAFCLSLENIATLQKLLRQLEMQKSQNEAVCEGLR
:::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 IILCMEALDHTPDTSFERDVVCEDEDAFCLSLENIATLQKLLRQLEMQKSQNEAVCEGLR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 TQIRELWDRLQIPEEEREAVATIMSGSKAKVRKALQLEVDRLEELKMQNMKKVIEAIRVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 TQIRELWDRLQIPEEEREAVATIMSGSKAKVRKALQLEVDRLEELKMQNMKKVIEAIRVE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 LVQYWDQCFYSQEQRQAFAPFCAEDYTESLLQLHDAEIVRLKNYYEVHKELFEGVQKWEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LVQYWDQCFYSQEQRQAFAPFCAEDYTESLLQLHDAEIVRLKNYYEVHKELFEGVQKWEE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 TWRLFLEFERKASDPNRFTNRGGNLLKEEKQRAKLQKMLPKLEEELKARIELWEQEHSKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 TWRLFLEFERKASDPNRFTNRGGNLLKEEKQRAKLQKMLPKLEEELKARIELWEQEHSKA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 FMVNGQKFMEYVAEQWEMHRLEKERAKQERQLKNKKQTETEMLYGSAPRTPSKRRGLAPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 FMVNGQKFMEYVAEQWEMHRLEKERAKQERQLKNKKQTETEMLYGSAPRTPSKRRGLAPN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 TPGKARKLNTTTMSNATANSSIRPIFGGTVYHSPVSRLPPSGSKPVAASTCSGKKTPRTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 TPGKARKLNTTTMSNATANSSIRPIFGGTVYHSPVSRLPPSGSKPVAASTCSGKKTPRTG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE4 RHGANKENLELNGSILSGGYPGSAPLQRNFSINSVASTYSEFAKDPSLSDSSTVGLQREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 RHGANKENLELNGSILSGGYPGSAPLQRNFSINSVASTYSEFAKDPSLSDSSTVGLQREL
550 560 570 580 590 600
610 620
pF1KE4 SKASKSDATSGILNSTNIQS
::::::::::::::::::::
CCDS32 SKASKSDATSGILNSTNIQS
610 620
>>CCDS45352.1 PRC1 gene_id:9055|Hs109|chr15 (606 aa)
initn: 3849 init1: 3810 opt: 3810 Z-score: 2724.4 bits: 514.2 E(33420): 2e-145
Smith-Waterman score: 3895; 97.6% identity (97.6% similar) in 620 aa overlap (1-620:1-606)
10 20 30 40 50 60
pF1KE4 MRRSEVLAEESIVCLQKALNHLREIWELIGIPEDQRLQRTEVVKKHIKELLDMMIAEEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MRRSEVLAEESIVCLQKALNHLREIWELIGIPEDQRLQRTEVVKKHIKELLDMMIAEEES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 LKERLIKSISVCQKELNTLCSELHVEPFQEEGETTILQLEKDLRTQVELMRKQKKERKQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LKERLIKSISVCQKELNTLCSELHVEPFQEEGETTILQLEKDLRTQVELMRKQKKERKQE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 LKLLQEQDQELCEILCMPHYDIDSASVPSLEELNQFRQHVTTLRETKASRREEFVSIKRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LKLLQEQDQELCEILCMPHYDIDSASVPSLEELNQFRQHVTTLRETKASRREEFVSIKRQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 IILCMEELDHTPDTSFERDVVCEDEDAFCLSLENIATLQKLLRQLEMQKSQNEAVCEGLR
:::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 IILCMEALDHTPDTSFERDVVCEDEDAFCLSLENIATLQKLLRQLEMQKSQNEAVCEGLR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 TQIRELWDRLQIPEEEREAVATIMSGSKAKVRKALQLEVDRLEELKMQNMKKVIEAIRVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TQIRELWDRLQIPEEEREAVATIMSGSKAKVRKALQLEVDRLEELKMQNMKKVIEAIRVE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 LVQYWDQCFYSQEQRQAFAPFCAEDYTESLLQLHDAEIVRLKNYYEVHKELFEGVQKWEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LVQYWDQCFYSQEQRQAFAPFCAEDYTESLLQLHDAEIVRLKNYYEVHKELFEGVQKWEE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 TWRLFLEFERKASDPNRFTNRGGNLLKEEKQRAKLQKMLPKLEEELKARIELWEQEHSKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TWRLFLEFERKASDPNRFTNRGGNLLKEEKQRAKLQKMLPKLEEELKARIELWEQEHSKA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 FMVNGQKFMEYVAEQWEMHRLEKERAKQERQLKNKKQTETEMLYGSAPRTPSKRRGLAPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 FMVNGQKFMEYVAEQWEMHRLEKERAKQERQLKNKKQTETEMLYGSAPRTPSKRRGLAPN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 TPGKARKLNTTTMSNATANSSIRPIFGGTVYHSPVSRLPPSGSKPVAASTCSGKKTPRTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TPGKARKLNTTTMSNATANSSIRPIFGGTVYHSPVSRLPPSGSKPVAASTCSGKKTPRTG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE4 RHGANKENLELNGSILSGGYPGSAPLQRNFSINSVASTYSEFAKDPSLSDSSTVGLQREL
::::::::::::::::::::::::::::::::::::::::::: :::
CCDS45 RHGANKENLELNGSILSGGYPGSAPLQRNFSINSVASTYSEFA--------------REL
550 560 570 580
610 620
pF1KE4 SKASKSDATSGILNSTNIQS
::::::::::::::::::::
CCDS45 SKASKSDATSGILNSTNIQS
590 600
>>CCDS45353.2 PRC1 gene_id:9055|Hs109|chr15 (525 aa)
initn: 3063 init1: 3063 opt: 3064 Z-score: 2195.0 bits: 416.0 E(33420): 6.3e-116
Smith-Waterman score: 3279; 92.5% identity (92.5% similar) in 557 aa overlap (1-557:1-516)
10 20 30 40 50 60
pF1KE4 MRRSEVLAEESIVCLQKALNHLREIWELIGIPEDQRLQRTEVVKKHIKELLDMMIAEEES
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MRRSEVLAEESIVCLQKALNHLREIWELIGIPEDQRLQRTEVVKKHIKE-----------
10 20 30 40
70 80 90 100 110 120
pF1KE4 LKERLIKSISVCQKELNTLCSELHVEPFQEEGETTILQLEKDLRTQVELMRKQKKERKQE
::::::::::::::::::::::::::::::
CCDS45 ------------------------------EGETTILQLEKDLRTQVELMRKQKKERKQE
50 60 70
130 140 150 160 170 180
pF1KE4 LKLLQEQDQELCEILCMPHYDIDSASVPSLEELNQFRQHVTTLRETKASRREEFVSIKRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LKLLQEQDQELCEILCMPHYDIDSASVPSLEELNQFRQHVTTLRETKASRREEFVSIKRQ
80 90 100 110 120 130
190 200 210 220 230 240
pF1KE4 IILCMEELDHTPDTSFERDVVCEDEDAFCLSLENIATLQKLLRQLEMQKSQNEAVCEGLR
:::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 IILCMEALDHTPDTSFERDVVCEDEDAFCLSLENIATLQKLLRQLEMQKSQNEAVCEGLR
140 150 160 170 180 190
250 260 270 280 290 300
pF1KE4 TQIRELWDRLQIPEEEREAVATIMSGSKAKVRKALQLEVDRLEELKMQNMKKVIEAIRVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TQIRELWDRLQIPEEEREAVATIMSGSKAKVRKALQLEVDRLEELKMQNMKKVIEAIRVE
200 210 220 230 240 250
310 320 330 340 350 360
pF1KE4 LVQYWDQCFYSQEQRQAFAPFCAEDYTESLLQLHDAEIVRLKNYYEVHKELFEGVQKWEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LVQYWDQCFYSQEQRQAFAPFCAEDYTESLLQLHDAEIVRLKNYYEVHKELFEGVQKWEE
260 270 280 290 300 310
370 380 390 400 410 420
pF1KE4 TWRLFLEFERKASDPNRFTNRGGNLLKEEKQRAKLQKMLPKLEEELKARIELWEQEHSKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TWRLFLEFERKASDPNRFTNRGGNLLKEEKQRAKLQKMLPKLEEELKARIELWEQEHSKA
320 330 340 350 360 370
430 440 450 460 470 480
pF1KE4 FMVNGQKFMEYVAEQWEMHRLEKERAKQERQLKNKKQTETEMLYGSAPRTPSKRRGLAPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 FMVNGQKFMEYVAEQWEMHRLEKERAKQERQLKNKKQTETEMLYGSAPRTPSKRRGLAPN
380 390 400 410 420 430
490 500 510 520 530 540
pF1KE4 TPGKARKLNTTTMSNATANSSIRPIFGGTVYHSPVSRLPPSGSKPVAASTCSGKKTPRTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TPGKARKLNTTTMSNATANSSIRPIFGGTVYHSPVSRLPPSGSKPVAASTCSGKKTPRTG
440 450 460 470 480 490
550 560 570 580 590 600
pF1KE4 RHGANKENLELNGSILSGGYPGSAPLQRNFSINSVASTYSEFAKDPSLSDSSTVGLQREL
:::::::::::::::::
CCDS45 RHGANKENLELNGSILSARTFKGFQI
500 510 520
620 residues in 1 query sequences
18921897 residues in 33420 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Oct 24 21:26:43 2019 done: Thu Oct 24 21:26:43 2019
Total Scan time: 1.750 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]