Result of FASTA (ccds) for
pF1KE4045
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4045, 267 aa
1>>>pF1KE4045 267 - 267 aa - 267 aa
Library: human.CCDS.faa
18921897 residues in 33420 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6855+/-0.000748; mu= 12.4148+/- 0.044
mean_var=64.1525+/-13.134, 0's: 0 Z-trim(107.6): 127 B-trim: 0 in 0/50
Lambda= 0.160128
statistics sampled from 9686 (9817) to 9686 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.682), E-opt: 0.2 (0.294), width: 16
Scan time: 1.050
The best scores are: opt bits E(33420)
CCDS32185.1 ARHGAP11B gene_id:89839|Hs109|chr15 ( 267) 1784 420.6 5.6e-118
CCDS58349.1 ARHGAP11A gene_id:9824|Hs109|chr15 ( 501) 1440 341.3 8.3e-94
CCDS10028.1 ARHGAP11A gene_id:9824|Hs109|chr15 (1023) 1440 341.4 1.6e-93
CCDS76261.1 SRGAP2 gene_id:23380|Hs109|chr1 ( 789) 293 76.3 7.3e-14
CCDS76262.1 SRGAP2 gene_id:23380|Hs109|chr1 (1070) 293 76.4 9.7e-14
CCDS73017.1 SRGAP2 gene_id:23380|Hs109|chr1 (1071) 293 76.4 9.7e-14
CCDS14736.1 ARHGAP4 gene_id:393|Hs109|chrX ( 946) 292 76.1 1e-13
CCDS55540.1 ARHGAP4 gene_id:393|Hs109|chrX ( 986) 292 76.1 1.1e-13
CCDS58079.1 ARHGAP22 gene_id:58504|Hs109|chr10 ( 608) 288 75.2 1.3e-13
CCDS7227.1 ARHGAP22 gene_id:58504|Hs109|chr10 ( 698) 288 75.2 1.5e-13
CCDS58081.1 ARHGAP22 gene_id:58504|Hs109|chr10 ( 704) 288 75.2 1.5e-13
CCDS58080.1 ARHGAP22 gene_id:58504|Hs109|chr10 ( 714) 286 74.7 2.1e-13
CCDS55201.1 DLC1 gene_id:10395|Hs109|chr8 (1017) 283 74.1 4.6e-13
CCDS5990.1 DLC1 gene_id:10395|Hs109|chr8 (1091) 283 74.1 4.9e-13
CCDS83253.1 DLC1 gene_id:10395|Hs109|chr8 (1125) 283 74.1 5e-13
CCDS82076.1 ARHGAP44 gene_id:9912|Hs109|chr17 ( 774) 280 73.3 5.8e-13
CCDS82077.1 ARHGAP44 gene_id:9912|Hs109|chr17 ( 812) 280 73.3 6e-13
CCDS45616.1 ARHGAP44 gene_id:9912|Hs109|chr17 ( 818) 280 73.3 6.1e-13
CCDS5989.1 DLC1 gene_id:10395|Hs109|chr8 (1528) 283 74.1 6.7e-13
CCDS7922.1 ARHGAP1 gene_id:392|Hs109|chr11 ( 439) 270 71.0 1.7e-12
CCDS8967.1 SRGAP1 gene_id:57522|Hs109|chr12 (1085) 272 71.5 2.8e-12
CCDS34535.1 ARHGAP18 gene_id:93663|Hs109|chr6 ( 663) 269 70.8 2.9e-12
CCDS2572.1 SRGAP3 gene_id:9901|Hs109|chr3 (1099) 269 70.8 4.6e-12
CCDS14390.1 STARD8 gene_id:9754|Hs109|chrX (1023) 261 69.0 1.6e-11
CCDS48134.1 STARD8 gene_id:9754|Hs109|chrX (1103) 261 69.0 1.7e-11
CCDS43246.1 ARHGAP24 gene_id:83478|Hs109|chr4 ( 653) 257 68.0 2e-11
CCDS32408.1 ARHGAP17 gene_id:55114|Hs109|chr16 ( 803) 258 68.3 2e-11
CCDS32409.1 ARHGAP17 gene_id:55114|Hs109|chr16 ( 881) 258 68.3 2.2e-11
CCDS34025.1 ARHGAP24 gene_id:83478|Hs109|chr4 ( 748) 257 68.0 2.2e-11
CCDS33689.1 SRGAP3 gene_id:9901|Hs109|chr3 (1075) 259 68.5 2.3e-11
CCDS14060.2 ARHGAP8 gene_id:23779|Hs109|chr22 ( 433) 252 66.8 3e-11
CCDS33664.1 ARHGAP8 gene_id:23779|Hs109|chr22 ( 464) 252 66.8 3.2e-11
CCDS54538.2 ARHGAP8 gene_id:553158|Hs109|chr22 ( 564) 252 66.8 3.8e-11
CCDS13952.2 SH3BP1 gene_id:23616|Hs109|chr22 ( 701) 253 67.1 4e-11
CCDS34029.1 FAM13A gene_id:10144|Hs109|chr4 (1023) 254 67.4 4.8e-11
CCDS3611.1 ARHGAP24 gene_id:83478|Hs109|chr4 ( 655) 247 65.7 9.8e-11
>>CCDS32185.1 ARHGAP11B gene_id:89839|Hs109|chr15 (267 aa)
initn: 1784 init1: 1784 opt: 1784 Z-score: 2231.7 bits: 420.6 E(33420): 5.6e-118
Smith-Waterman score: 1784; 100.0% identity (100.0% similar) in 267 aa overlap (1-267:1-267)
10 20 30 40 50 60
pF1KE4 MWDQRLVKLALLQHLRAFYGIKVKGVRGQCDRRRHETAATEIGGKIFGVPFNALPHSAVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MWDQRLVKLALLQHLRAFYGIKVKGVRGQCDRRRHETAATEIGGKIFGVPFNALPHSAVP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 EYGHIPSFLVDACTSLEEHIHTEGLFRKSGSVIRLKALKNKVDHGEGCLSSAPPCDIAGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 EYGHIPSFLVDACTSLEEHIHTEGLFRKSGSVIRLKALKNKVDHGEGCLSSAPPCDIAGL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 LKQFFRELPEPILPADLHEALLKAQQLGTEEKNKAILLLSCLLADHTVHVLRYFFNFLRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LKQFFRELPEPILPADLHEALLKAQQLGTEEKNKAILLLSCLLADHTVHVLRYFFNFLRN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 VSLRSSENKMDSSNLAVIFAPNLLQTSEGHEKMSSNAEKKGVYQTLSWKRYQPCWVLMVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 VSLRSSENKMDSSNLAVIFAPNLLQTSEGHEKMSSNAEKKGVYQTLSWKRYQPCWVLMVS
190 200 210 220 230 240
250 260
pF1KE4 VLLHHWKALKKVNMKLLVNIREREDNV
:::::::::::::::::::::::::::
CCDS32 VLLHHWKALKKVNMKLLVNIREREDNV
250 260
>>CCDS58349.1 ARHGAP11A gene_id:9824|Hs109|chr15 (501 aa)
initn: 1439 init1: 1439 opt: 1440 Z-score: 1797.8 bits: 341.3 E(33420): 8.3e-94
Smith-Waterman score: 1440; 95.2% identity (97.0% similar) in 231 aa overlap (1-226:1-231)
10 20 30 40 50 60
pF1KE4 MWDQRLVKLALLQHLRAFYGIKVKGVRGQCDRRRHETAATEIGGKIFGVPFNALPHSAVP
:::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MWDQRLVRLALLQHLRAFYGIKVKGVRGQCDRRRHETAATEIGGKIFGVPFNALPHSAVP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 EYGHIPSFLVDACTSLEEHIHTEGLFRKSGSVIRLKALKNKVDHGEGCLSSAPPCDIAGL
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
CCDS58 EYGHIPSFLVDACTSLEDHIHTEGLFRKSGSVIRLKALKNKVDHGEGCLSSAPPCDIAGL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 LKQFFRELPEPILPADLHEALLKAQQLGTEEKNKAILLLSCLLADHTVHVLRYFFNFLRN
::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::
CCDS58 LKQFFRELPEPILPADLHEALLKAQQLGTEEKNKATLLLSCLLADHTVHVLRYFFNFLRN
130 140 150 160 170 180
190 200 210 220 230
pF1KE4 VSLRSSENKMDSSNLAVIFAPNLLQTSEGHEKMSSNAEKK-----GVYQTLSWKRYQPCW
::::::::::::::::::::::::::::::::::::.::: .: :::
CCDS58 VSLRSSENKMDSSNLAVIFAPNLLQTSEGHEKMSSNTEKKLRLQAAVVQTLIDYASDIGR
190 200 210 220 230 240
240 250 260
pF1KE4 VLMVSVLLHHWKALKKVNMKLLVNIREREDNV
CCDS58 VPDFILEKIPAMLGIDGLCATPSLEGFEEGEYETPGEYKRKRRQSVGDFVSGALNKFKPN
250 260 270 280 290 300
>>CCDS10028.1 ARHGAP11A gene_id:9824|Hs109|chr15 (1023 aa)
initn: 1439 init1: 1439 opt: 1440 Z-score: 1792.7 bits: 341.4 E(33420): 1.6e-93
Smith-Waterman score: 1440; 95.2% identity (97.0% similar) in 231 aa overlap (1-226:1-231)
10 20 30 40 50 60
pF1KE4 MWDQRLVKLALLQHLRAFYGIKVKGVRGQCDRRRHETAATEIGGKIFGVPFNALPHSAVP
:::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MWDQRLVRLALLQHLRAFYGIKVKGVRGQCDRRRHETAATEIGGKIFGVPFNALPHSAVP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 EYGHIPSFLVDACTSLEEHIHTEGLFRKSGSVIRLKALKNKVDHGEGCLSSAPPCDIAGL
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
CCDS10 EYGHIPSFLVDACTSLEDHIHTEGLFRKSGSVIRLKALKNKVDHGEGCLSSAPPCDIAGL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 LKQFFRELPEPILPADLHEALLKAQQLGTEEKNKAILLLSCLLADHTVHVLRYFFNFLRN
::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::
CCDS10 LKQFFRELPEPILPADLHEALLKAQQLGTEEKNKATLLLSCLLADHTVHVLRYFFNFLRN
130 140 150 160 170 180
190 200 210 220 230
pF1KE4 VSLRSSENKMDSSNLAVIFAPNLLQTSEGHEKMSSNAEKK-----GVYQTLSWKRYQPCW
::::::::::::::::::::::::::::::::::::.::: .: :::
CCDS10 VSLRSSENKMDSSNLAVIFAPNLLQTSEGHEKMSSNTEKKLRLQAAVVQTLIDYASDIGR
190 200 210 220 230 240
240 250 260
pF1KE4 VLMVSVLLHHWKALKKVNMKLLVNIREREDNV
CCDS10 VPDFILEKIPAMLGIDGLCATPSLEGFEEGEYETPGEYKRKRRQSVGDFVSGALNKFKPN
250 260 270 280 290 300
>>CCDS76261.1 SRGAP2 gene_id:23380|Hs109|chr1 (789 aa)
initn: 280 init1: 147 opt: 293 Z-score: 362.5 bits: 76.3 E(33420): 7.3e-14
Smith-Waterman score: 293; 33.7% identity (65.7% similar) in 169 aa overlap (65-226:503-670)
40 50 60 70 80 90
pF1KE4 HETAATEIGGKIFGVPFNALPHSAVPEYGHIPSFLVDACTS-LEEH-IHTEGLFRKSGSV
:: ..:..: . .: .. ::.:: :::
CCDS76 LQKTLGESQRTDCSLARRSSTVRKQDSSQAIP-LVVESCIRFISRHGLQHEGIFRVSGSQ
480 490 500 510 520 530
100 110 120 130 140
pF1KE4 IRLKALKNKVDHGEGCLSSAP---PCD-IAGLLKQFFRELPEPILPADL-HEALLKAQQL
.... .:: ..:: :.. : :::.:: .:: : .:..: :. :. . . .
CCDS76 VEVNDIKNAFERGEDPLAGDQNDHDMDSIAGVLKLYFRGLEHPLFPKDIFHDLMACVTMD
540 550 560 570 580 590
150 160 170 180 190 200
pF1KE4 GTEEKNKAILLLSCLLADHTVHVLRYFFNFLRNVSLRSSENKMDSSNLAVIFAPNLLQTS
. .:. : . .: :. ..::.: :: ..: : :: :: :::. :.:.:...
CCDS76 NLQERALHIRKVLLVLPKTTLIIMRYLFAFLNHLSQFSEENMMDPYNLAICFGPSLMSVP
600 610 620 630 640 650
210 220 230 240 250 260
pF1KE4 EGHEKMSSNAEKKGVYQTLSWKRYQPCWVLMVSVLLHHWKALKKVNMKLLVNIREREDNV
:::...: .:. . . .:.
CCDS76 EGHDQVSCQAHVNELIKTIIIQHENIFPSPRELEGPVYSRGGSMEDYCDSPHGETTSVED
660 670 680 690 700 710
>>CCDS76262.1 SRGAP2 gene_id:23380|Hs109|chr1 (1070 aa)
initn: 280 init1: 147 opt: 293 Z-score: 360.4 bits: 76.4 E(33420): 9.7e-14
Smith-Waterman score: 293; 33.7% identity (65.7% similar) in 169 aa overlap (65-226:503-670)
40 50 60 70 80 90
pF1KE4 HETAATEIGGKIFGVPFNALPHSAVPEYGHIPSFLVDACTS-LEEH-IHTEGLFRKSGSV
:: ..:..: . .: .. ::.:: :::
CCDS76 LQKTLGESQRTDCSLARRSSTVRKQDSSQAIP-LVVESCIRFISRHGLQHEGIFRVSGSQ
480 490 500 510 520 530
100 110 120 130 140
pF1KE4 IRLKALKNKVDHGEGCLSSAP---PCD-IAGLLKQFFRELPEPILPADL-HEALLKAQQL
.... .:: ..:: :.. : :::.:: .:: : .:..: :. :. . . .
CCDS76 VEVNDIKNAFERGEDPLAGDQNDHDMDSIAGVLKLYFRGLEHPLFPKDIFHDLMACVTMD
540 550 560 570 580 590
150 160 170 180 190 200
pF1KE4 GTEEKNKAILLLSCLLADHTVHVLRYFFNFLRNVSLRSSENKMDSSNLAVIFAPNLLQTS
. .:. : . .: :. ..::.: :: ..: : :: :: :::. :.:.:...
CCDS76 NLQERALHIRKVLLVLPKTTLIIMRYLFAFLNHLSQFSEENMMDPYNLAICFGPSLMSVP
600 610 620 630 640 650
210 220 230 240 250 260
pF1KE4 EGHEKMSSNAEKKGVYQTLSWKRYQPCWVLMVSVLLHHWKALKKVNMKLLVNIREREDNV
:::...: .:. . . .:.
CCDS76 EGHDQVSCQAHVNELIKTIIIQHENIFPSPRELEGPVYSRGGSMEDYCDSPHGETTSVED
660 670 680 690 700 710
>>CCDS73017.1 SRGAP2 gene_id:23380|Hs109|chr1 (1071 aa)
initn: 280 init1: 147 opt: 293 Z-score: 360.3 bits: 76.4 E(33420): 9.7e-14
Smith-Waterman score: 293; 33.7% identity (65.7% similar) in 169 aa overlap (65-226:504-671)
40 50 60 70 80 90
pF1KE4 HETAATEIGGKIFGVPFNALPHSAVPEYGHIPSFLVDACTS-LEEH-IHTEGLFRKSGSV
:: ..:..: . .: .. ::.:: :::
CCDS73 LQKTLGESQRTDCSLARRSSTVRKQDSSQAIP-LVVESCIRFISRHGLQHEGIFRVSGSQ
480 490 500 510 520 530
100 110 120 130 140
pF1KE4 IRLKALKNKVDHGEGCLSSAP---PCD-IAGLLKQFFRELPEPILPADL-HEALLKAQQL
.... .:: ..:: :.. : :::.:: .:: : .:..: :. :. . . .
CCDS73 VEVNDIKNAFERGEDPLAGDQNDHDMDSIAGVLKLYFRGLEHPLFPKDIFHDLMACVTMD
540 550 560 570 580 590
150 160 170 180 190 200
pF1KE4 GTEEKNKAILLLSCLLADHTVHVLRYFFNFLRNVSLRSSENKMDSSNLAVIFAPNLLQTS
. .:. : . .: :. ..::.: :: ..: : :: :: :::. :.:.:...
CCDS73 NLQERALHIRKVLLVLPKTTLIIMRYLFAFLNHLSQFSEENMMDPYNLAICFGPSLMSVP
600 610 620 630 640 650
210 220 230 240 250 260
pF1KE4 EGHEKMSSNAEKKGVYQTLSWKRYQPCWVLMVSVLLHHWKALKKVNMKLLVNIREREDNV
:::...: .:. . . .:.
CCDS73 EGHDQVSCQAHVNELIKTIIIQHENIFPSPRELEGPVYSRGGSMEDYCDSPHGETTSVED
660 670 680 690 700 710
>>CCDS14736.1 ARHGAP4 gene_id:393|Hs109|chrX (946 aa)
initn: 152 init1: 152 opt: 292 Z-score: 360.0 bits: 76.1 E(33420): 1e-13
Smith-Waterman score: 292; 30.4% identity (62.3% similar) in 204 aa overlap (32-226:490-687)
10 20 30 40 50 60
pF1KE4 WDQRLVKLALLQHLRAFYGIKVKGVRGQCDRRRHETAATEIGGKIFGVPFNALPHSAVPE
. :. ... . ..:: .. . .:.
CCDS14 KHEKLQEALQRGDKEEQEVSWTQYTQRKFQKSRQPRPSSQYNQRLFGGDMEKFIQSS---
460 470 480 490 500 510
70 80 90 100 110
pF1KE4 YGHIPSFLVDACTSL--EEHIHTEGLFRKSGSVIRLKALKNKVDHGE-----GCLSSAPP
:. ..:..: . . .. ::.:: ::. .:.. ... ..:: :: .:
CCDS14 -GQPVPLVVESCIRFINLNGLQHEGIFRVSGAQLRVSEIRDAFERGEDPLVEGC--TAHD
520 530 540 550 560 570
120 130 140 150 160 170
pF1KE4 CD-IAGLLKQFFRELPEPILPADLHEALLKAQQL-GTEEKNKAILLLSCLLADHTVHVLR
: .::.:: .:: : :..: :: :: ...: .: :. . . : : .. :::
CCDS14 LDSVAGVLKLYFRSLEPPLFPPDLFGELLASSELEATAERVEHVSRLLWRLPAPVLVVLR
580 590 600 610 620 630
180 190 200 210 220 230
pF1KE4 YFFNFLRNVSLRSSENKMDSSNLAVIFAPNLLQTSEGHEKMSSNAEKKGVYQTLSWKRYQ
:.:.:: ... :.:: :: :::: :.:.:: . :.. .. ... . . :::
CCDS14 YLFTFLNHLAQYSDENMMDPYNLAVCFGPTLLPVPAGQDPVALQGRVNQLVQTLIVQPDR
640 650 660 670 680 690
240 250 260
pF1KE4 PCWVLMVSVLLHHWKALKKVNMKLLVNIREREDNV
CCDS14 VFPPLTSLPGPVYEKCMAPPSASCLGDAQLESLGADNEPELEAEMPAQEDDLEGVVEAVA
700 710 720 730 740 750
>>CCDS55540.1 ARHGAP4 gene_id:393|Hs109|chrX (986 aa)
initn: 152 init1: 152 opt: 292 Z-score: 359.7 bits: 76.1 E(33420): 1.1e-13
Smith-Waterman score: 292; 30.4% identity (62.3% similar) in 204 aa overlap (32-226:530-727)
10 20 30 40 50 60
pF1KE4 WDQRLVKLALLQHLRAFYGIKVKGVRGQCDRRRHETAATEIGGKIFGVPFNALPHSAVPE
. :. ... . ..:: .. . .:.
CCDS55 KHEKLQEALQRGDKEEQEVSWTQYTQRKFQKSRQPRPSSQYNQRLFGGDMEKFIQSS---
500 510 520 530 540 550
70 80 90 100 110
pF1KE4 YGHIPSFLVDACTSL--EEHIHTEGLFRKSGSVIRLKALKNKVDHGE-----GCLSSAPP
:. ..:..: . . .. ::.:: ::. .:.. ... ..:: :: .:
CCDS55 -GQPVPLVVESCIRFINLNGLQHEGIFRVSGAQLRVSEIRDAFERGEDPLVEGC--TAHD
560 570 580 590 600 610
120 130 140 150 160 170
pF1KE4 CD-IAGLLKQFFRELPEPILPADLHEALLKAQQL-GTEEKNKAILLLSCLLADHTVHVLR
: .::.:: .:: : :..: :: :: ...: .: :. . . : : .. :::
CCDS55 LDSVAGVLKLYFRSLEPPLFPPDLFGELLASSELEATAERVEHVSRLLWRLPAPVLVVLR
620 630 640 650 660 670
180 190 200 210 220 230
pF1KE4 YFFNFLRNVSLRSSENKMDSSNLAVIFAPNLLQTSEGHEKMSSNAEKKGVYQTLSWKRYQ
:.:.:: ... :.:: :: :::: :.:.:: . :.. .. ... . . :::
CCDS55 YLFTFLNHLAQYSDENMMDPYNLAVCFGPTLLPVPAGQDPVALQGRVNQLVQTLIVQPDR
680 690 700 710 720 730
240 250 260
pF1KE4 PCWVLMVSVLLHHWKALKKVNMKLLVNIREREDNV
CCDS55 VFPPLTSLPGPVYEKCMAPPSASCLGDAQLESLGADNEPELEAEMPAQEDDLEGVVEAVA
740 750 760 770 780 790
>>CCDS58079.1 ARHGAP22 gene_id:58504|Hs109|chr10 (608 aa)
initn: 271 init1: 106 opt: 288 Z-score: 358.1 bits: 75.2 E(33420): 1.3e-13
Smith-Waterman score: 288; 34.3% identity (66.9% similar) in 172 aa overlap (42-205:58-228)
20 30 40 50 60 70
pF1KE4 LQHLRAFYGIKVKGVRGQCDRRRHETAATEIGGKIFGVPFNALPHSAVPEYG-HIPSFLV
.:: ::: .. : .:: .. .::
CCDS58 ANPEALLLMASSQRDMEDWVQAIRRVIWAPLGGGIFGQRLEETVHHER-KYGPRLAPLLV
30 40 50 60 70 80
80 90 100 110 120
pF1KE4 DACTSL--EEHIHTEGLFRKSGSVIRLKALKNKVDHGEGCL--SSAPPCDIAGLLKQFFR
. :... :. . ::::: :.. .. :... : :: : :.. .:.::: ..:
CCDS58 EQCVDFIRERGLTEEGLFRMPGQANLVRDLQDSFDCGEKPLFDSTTDVHTVASLLKLYLR
90 100 110 120 130 140
130 140 150 160 170 180
pF1KE4 ELPEPILPADLHEALLKAQQLGTEEKNKAILLLSCLLAD---HTVHVLRYFFNFLRNVSL
:::::..: .: .:. :: :...... : :. ... . ..:::. .:: .:.
CCDS58 ELPEPVVPFARYEDFLSCAQLLTKDEGEGTLELAKQVSNLPQANYNLLRYICKFLDEVQA
150 160 170 180 190 200
190 200 210 220 230 240
pF1KE4 RSSENKMDSSNLAVIFAPNLLQTSEGHEKMSSNAEKKGVYQTLSWKRYQPCWVLMVSVLL
:. :::. .:::..:.::.:.
CCDS58 YSNVNKMSVQNLATVFGPNILRPQVEDPVTIMEGTSLVQHLMTVLIRKHSQLFTAPVPEG
210 220 230 240 250 260
>>CCDS7227.1 ARHGAP22 gene_id:58504|Hs109|chr10 (698 aa)
initn: 271 init1: 106 opt: 288 Z-score: 357.1 bits: 75.2 E(33420): 1.5e-13
Smith-Waterman score: 288; 34.3% identity (66.9% similar) in 172 aa overlap (42-205:148-318)
20 30 40 50 60 70
pF1KE4 LQHLRAFYGIKVKGVRGQCDRRRHETAATEIGGKIFGVPFNALPHSAVPEYG-HIPSFLV
.:: ::: .. : .:: .. .::
CCDS72 ANPEALLLMASSQRDMEDWVQAIRRVIWAPLGGGIFGQRLEETVHHER-KYGPRLAPLLV
120 130 140 150 160 170
80 90 100 110 120
pF1KE4 DACTSL--EEHIHTEGLFRKSGSVIRLKALKNKVDHGEGCL--SSAPPCDIAGLLKQFFR
. :... :. . ::::: :.. .. :... : :: : :.. .:.::: ..:
CCDS72 EQCVDFIRERGLTEEGLFRMPGQANLVRDLQDSFDCGEKPLFDSTTDVHTVASLLKLYLR
180 190 200 210 220 230
130 140 150 160 170 180
pF1KE4 ELPEPILPADLHEALLKAQQLGTEEKNKAILLLSCLLAD---HTVHVLRYFFNFLRNVSL
:::::..: .: .:. :: :...... : :. ... . ..:::. .:: .:.
CCDS72 ELPEPVVPFARYEDFLSCAQLLTKDEGEGTLELAKQVSNLPQANYNLLRYICKFLDEVQA
240 250 260 270 280 290
190 200 210 220 230 240
pF1KE4 RSSENKMDSSNLAVIFAPNLLQTSEGHEKMSSNAEKKGVYQTLSWKRYQPCWVLMVSVLL
:. :::. .:::..:.::.:.
CCDS72 YSNVNKMSVQNLATVFGPNILRPQVEDPVTIMEGTSLVQHLMTVLIRKHSQLFTAPVPEG
300 310 320 330 340 350
267 residues in 1 query sequences
18921897 residues in 33420 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Jul 16 15:58:36 2019 done: Tue Jul 16 15:58:36 2019
Total Scan time: 1.050 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]