Result of FASTA (ccds) for
pF1KE3328
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3328, 936 aa
1>>>pF1KE3328 936 - 936 aa - 936 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.3323+/-0.00194; mu= -3.8411+/- 0.111
mean_var=483.9509+/-109.864, 0's: 0 Z-trim(105.9): 713 B-trim: 235 in 1/49
Lambda= 0.058301
statistics sampled from 7850 (8688) to 7850 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.614), E-opt: 0.2 (0.267), width: 16
Scan time: 3.900
The best scores are: opt bits E(32554)
CCDS44161.2 TNNI3K gene_id:100526835|Hs108|chr1 ( 949) 6255 543.0 1e-153
CCDS664.1 TNNI3K gene_id:51086|Hs108|chr1 ( 835) 5507 480.0 8.2e-135
CCDS663.2 FPGT gene_id:8790|Hs108|chr1 ( 607) 754 80.0 1.5e-14
>>CCDS44161.2 TNNI3K gene_id:100526835|Hs108|chr1 (949 aa)
initn: 6255 init1: 6255 opt: 6255 Z-score: 2873.2 bits: 543.0 E(32554): 1e-153
Smith-Waterman score: 6255; 100.0% identity (100.0% similar) in 936 aa overlap (1-936:14-949)
10 20 30 40
pF1KE3 MAAARDPPEVSLREATQRKLRRFSELRGKLVARGEFWDIVAITAADE
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MRAVRRGLREGGAMAAARDPPEVSLREATQRKLRRFSELRGKLVARGEFWDIVAITAADE
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE3 KQELAYNQQLSEKLKRKELPLGVQYHVFVDPAGAKIGNGGSTLCALQCLEKLYGDKWNSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KQELAYNQQLSEKLKRKELPLGVQYHVFVDPAGAKIGNGGSTLCALQCLEKLYGDKWNSF
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE3 TILLIHSDEWKKKVSESYVITIERLEDDLQIKEKELTELRNIFGSDEAFSKVNLNYRTEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TILLIHSDEWKKKVSESYVITIERLEDDLQIKEKELTELRNIFGSDEAFSKVNLNYRTEN
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE3 GLSLLHLCCICGGKKSHIRTLMLKGLRPSRLTRNGFTALHLAVYKDNAELITSLLHSGAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GLSLLHLCCICGGKKSHIRTLMLKGLRPSRLTRNGFTALHLAVYKDNAELITSLLHSGAD
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE3 IQQVGYGGLTALHIATIAGHLEAADVLLQHGANVNIQDAVFFTPLHIAAYYGHEQVTRLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 IQQVGYGGLTALHIATIAGHLEAADVLLQHGANVNIQDAVFFTPLHIAAYYGHEQVTRLL
250 260 270 280 290 300
290 300 310 320 330 340
pF1KE3 LKFGADVNVSGEVGDRPLHLASAKGFLNIAKLLMEEGSKADVNAQDNEDHVPLHFCSRFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LKFGADVNVSGEVGDRPLHLASAKGFLNIAKLLMEEGSKADVNAQDNEDHVPLHFCSRFG
310 320 330 340 350 360
350 360 370 380 390 400
pF1KE3 HHDIVKYLLQSDLEVQPHVVNIYGDTPLHLACYNGKFEVAKEIIQISGTESLTKENIFSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 HHDIVKYLLQSDLEVQPHVVNIYGDTPLHLACYNGKFEVAKEIIQISGTESLTKENIFSE
370 380 390 400 410 420
410 420 430 440 450 460
pF1KE3 TAFHSACTYGKSIDLVKFLLDQNVININHQGRDGHTGLHSACYHGHIRLVQFLLDNGADM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TAFHSACTYGKSIDLVKFLLDQNVININHQGRDGHTGLHSACYHGHIRLVQFLLDNGADM
430 440 450 460 470 480
470 480 490 500 510 520
pF1KE3 NLVACDPSRSSGEKDEQTCLMWAYEKGHDAIVTLLKHYKRPQDELPCNEYSQPGGDGSYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 NLVACDPSRSSGEKDEQTCLMWAYEKGHDAIVTLLKHYKRPQDELPCNEYSQPGGDGSYV
490 500 510 520 530 540
530 540 550 560 570 580
pF1KE3 SVPSPLGKIKSMTKEKADILLLRAGLPSHFHLQLSEIEFHEIIGSGSFGKVYKGRCRNKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SVPSPLGKIKSMTKEKADILLLRAGLPSHFHLQLSEIEFHEIIGSGSFGKVYKGRCRNKI
550 560 570 580 590 600
590 600 610 620 630 640
pF1KE3 VAIKRYRANTYCSKSDVDMFCREVSILCQLNHPCVIQFVGACLNDPSQFAIVTQYISGGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VAIKRYRANTYCSKSDVDMFCREVSILCQLNHPCVIQFVGACLNDPSQFAIVTQYISGGS
610 620 630 640 650 660
650 660 670 680 690 700
pF1KE3 LFSLLHEQKRILDLQSKLIIAVDVAKGMEYLHNLTQPIIHRDLNSHNILLYEDGHAVVAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LFSLLHEQKRILDLQSKLIIAVDVAKGMEYLHNLTQPIIHRDLNSHNILLYEDGHAVVAD
670 680 690 700 710 720
710 720 730 740 750 760
pF1KE3 FGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCTRYTIKADVFSYALCLWEILTGEIPFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 FGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCTRYTIKADVFSYALCLWEILTGEIPFA
730 740 750 760 770 780
770 780 790 800 810 820
pF1KE3 HLKPAAAAADMAYHHIRPPIGYSIPKPISSLLIRGWNACPEGRPEFSEVVMKLEECLCNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 HLKPAAAAADMAYHHIRPPIGYSIPKPISSLLIRGWNACPEGRPEFSEVVMKLEECLCNI
790 800 810 820 830 840
830 840 850 860 870 880
pF1KE3 ELMSPASSNSSGSLSPSSSSDCLVNRGGPGRSHVAALRSRFELEYALNARSYAALSQSAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ELMSPASSNSSGSLSPSSSSDCLVNRGGPGRSHVAALRSRFELEYALNARSYAALSQSAG
850 860 870 880 890 900
890 900 910 920 930
pF1KE3 QYSSQGLSLEEMKRSLQYTPIDKYGYVSDPMSSMHFHSCRNSSSFEDSS
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QYSSQGLSLEEMKRSLQYTPIDKYGYVSDPMSSMHFHSCRNSSSFEDSS
910 920 930 940
>>CCDS664.1 TNNI3K gene_id:51086|Hs108|chr1 (835 aa)
initn: 5507 init1: 5507 opt: 5507 Z-score: 2533.8 bits: 480.0 E(32554): 8.2e-135
Smith-Waterman score: 5507; 99.9% identity (100.0% similar) in 823 aa overlap (114-936:13-835)
90 100 110 120 130 140
pF1KE3 GNGGSTLCALQCLEKLYGDKWNSFTILLIHSDEWKKKVSESYVITIERLEDDLQIKEKEL
.:::::::::::::::::::::::::::::
CCDS66 MGNYKSRPTQTCTDEWKKKVSESYVITIERLEDDLQIKEKEL
10 20 30 40
150 160 170 180 190 200
pF1KE3 TELRNIFGSDEAFSKVNLNYRTENGLSLLHLCCICGGKKSHIRTLMLKGLRPSRLTRNGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 TELRNIFGSDEAFSKVNLNYRTENGLSLLHLCCICGGKKSHIRTLMLKGLRPSRLTRNGF
50 60 70 80 90 100
210 220 230 240 250 260
pF1KE3 TALHLAVYKDNAELITSLLHSGADIQQVGYGGLTALHIATIAGHLEAADVLLQHGANVNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 TALHLAVYKDNAELITSLLHSGADIQQVGYGGLTALHIATIAGHLEAADVLLQHGANVNI
110 120 130 140 150 160
270 280 290 300 310 320
pF1KE3 QDAVFFTPLHIAAYYGHEQVTRLLLKFGADVNVSGEVGDRPLHLASAKGFLNIAKLLMEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 QDAVFFTPLHIAAYYGHEQVTRLLLKFGADVNVSGEVGDRPLHLASAKGFLNIAKLLMEE
170 180 190 200 210 220
330 340 350 360 370 380
pF1KE3 GSKADVNAQDNEDHVPLHFCSRFGHHDIVKYLLQSDLEVQPHVVNIYGDTPLHLACYNGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 GSKADVNAQDNEDHVPLHFCSRFGHHDIVKYLLQSDLEVQPHVVNIYGDTPLHLACYNGK
230 240 250 260 270 280
390 400 410 420 430 440
pF1KE3 FEVAKEIIQISGTESLTKENIFSETAFHSACTYGKSIDLVKFLLDQNVININHQGRDGHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 FEVAKEIIQISGTESLTKENIFSETAFHSACTYGKSIDLVKFLLDQNVININHQGRDGHT
290 300 310 320 330 340
450 460 470 480 490 500
pF1KE3 GLHSACYHGHIRLVQFLLDNGADMNLVACDPSRSSGEKDEQTCLMWAYEKGHDAIVTLLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 GLHSACYHGHIRLVQFLLDNGADMNLVACDPSRSSGEKDEQTCLMWAYEKGHDAIVTLLK
350 360 370 380 390 400
510 520 530 540 550 560
pF1KE3 HYKRPQDELPCNEYSQPGGDGSYVSVPSPLGKIKSMTKEKADILLLRAGLPSHFHLQLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 HYKRPQDELPCNEYSQPGGDGSYVSVPSPLGKIKSMTKEKADILLLRAGLPSHFHLQLSE
410 420 430 440 450 460
570 580 590 600 610 620
pF1KE3 IEFHEIIGSGSFGKVYKGRCRNKIVAIKRYRANTYCSKSDVDMFCREVSILCQLNHPCVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 IEFHEIIGSGSFGKVYKGRCRNKIVAIKRYRANTYCSKSDVDMFCREVSILCQLNHPCVI
470 480 490 500 510 520
630 640 650 660 670 680
pF1KE3 QFVGACLNDPSQFAIVTQYISGGSLFSLLHEQKRILDLQSKLIIAVDVAKGMEYLHNLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 QFVGACLNDPSQFAIVTQYISGGSLFSLLHEQKRILDLQSKLIIAVDVAKGMEYLHNLTQ
530 540 550 560 570 580
690 700 710 720 730 740
pF1KE3 PIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCTRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 PIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCTRY
590 600 610 620 630 640
750 760 770 780 790 800
pF1KE3 TIKADVFSYALCLWEILTGEIPFAHLKPAAAAADMAYHHIRPPIGYSIPKPISSLLIRGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 TIKADVFSYALCLWEILTGEIPFAHLKPAAAAADMAYHHIRPPIGYSIPKPISSLLIRGW
650 660 670 680 690 700
810 820 830 840 850 860
pF1KE3 NACPEGRPEFSEVVMKLEECLCNIELMSPASSNSSGSLSPSSSSDCLVNRGGPGRSHVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 NACPEGRPEFSEVVMKLEECLCNIELMSPASSNSSGSLSPSSSSDCLVNRGGPGRSHVAA
710 720 730 740 750 760
870 880 890 900 910 920
pF1KE3 LRSRFELEYALNARSYAALSQSAGQYSSQGLSLEEMKRSLQYTPIDKYGYVSDPMSSMHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 LRSRFELEYALNARSYAALSQSAGQYSSQGLSLEEMKRSLQYTPIDKYGYVSDPMSSMHF
770 780 790 800 810 820
930
pF1KE3 HSCRNSSSFEDSS
:::::::::::::
CCDS66 HSCRNSSSFEDSS
830
>>CCDS663.2 FPGT gene_id:8790|Hs108|chr1 (607 aa)
initn: 754 init1: 754 opt: 754 Z-score: 374.7 bits: 80.0 E(32554): 1.5e-14
Smith-Waterman score: 754; 94.2% identity (98.3% similar) in 121 aa overlap (1-121:14-134)
10 20 30 40
pF1KE3 MAAARDPPEVSLREATQRKLRRFSELRGKLVARGEFWDIVAITAADE
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 MRAVRRGLREGGAMAAARDPPEVSLREATQRKLRRFSELRGKLVARGEFWDIVAITAADE
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE3 KQELAYNQQLSEKLKRKELPLGVQYHVFVDPAGAKIGNGGSTLCALQCLEKLYGDKWNSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 KQELAYNQQLSEKLKRKELPLGVQYHVFVDPAGAKIGNGGSTLCALQCLEKLYGDKWNSF
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE3 TILLIHSDEWKKKVSESYVITIERLEDDLQIKEKELTELRNIFGSDEAFSKVNLNYRTEN
::::::: .....
CCDS66 TILLIHSGGYSQRLPNASALGKIFTALPLGNPIYQMLELKLAMYIDFPLNMNPGILVTCA
130 140 150 160 170 180
936 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 19:16:16 2016 done: Sun Nov 6 19:16:17 2016
Total Scan time: 3.900 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]