Result of FASTA (omim) for
pF1KE2754
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2754, 281 aa
1>>>pF1KE2754 281 - 281 aa - 281 aa
Library: /omim/omim.rfq.tfa
65951994 residues in 93482 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.7117+/-0.00039; mu= 17.8329+/- 0.024
mean_var=59.2248+/-12.632, 0's: 0 Z-trim(110.1): 32 B-trim: 0 in 0/58
Lambda= 0.166657
statistics sampled from 19195 (19227) to 19195 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.57), E-opt: 0.2 (0.206), width: 16
Scan time: 2.840
The best scores are: opt bits E(93482)
XP_006714758 (OMIM: 614451) elongation of very lon ( 281) 1956 479.0 4.7e-135
NP_001098028 (OMIM: 614451) elongation of very lon ( 281) 1956 479.0 4.7e-135
NP_079206 (OMIM: 614451) elongation of very long c ( 281) 1956 479.0 4.7e-135
XP_005248663 (OMIM: 614451) elongation of very lon ( 281) 1956 479.0 4.7e-135
XP_016865374 (OMIM: 614451) elongation of very lon ( 281) 1956 479.0 4.7e-135
XP_011541953 (OMIM: 614451) elongation of very lon ( 281) 1956 479.0 4.7e-135
XP_016865375 (OMIM: 614451) elongation of very lon ( 268) 1806 442.9 3.3e-124
XP_005248664 (OMIM: 614451) elongation of very lon ( 268) 1806 442.9 3.3e-124
XP_016865376 (OMIM: 614451) elongation of very lon ( 268) 1806 442.9 3.3e-124
NP_001284546 (OMIM: 614451) elongation of very lon ( 268) 1806 442.9 3.3e-124
NP_001284547 (OMIM: 614451) elongation of very lon ( 194) 1367 337.3 1.5e-92
NP_073732 (OMIM: 611813) elongation of very long c ( 279) 1194 295.8 6.7e-80
NP_001243328 (OMIM: 611813) elongation of very lon ( 279) 1194 295.8 6.7e-80
NP_001243331 (OMIM: 611813) elongation of very lon ( 198) 916 228.8 6.7e-60
NP_001243330 (OMIM: 611813) elongation of very lon ( 252) 822 206.3 5.2e-53
NP_073563 (OMIM: 133190,600110,605512,614457) elon ( 314) 822 206.4 6.2e-53
NP_060240 (OMIM: 611814) elongation of very long c ( 296) 697 176.3 6.6e-44
XP_011513019 (OMIM: 611814) elongation of very lon ( 297) 697 176.3 6.6e-44
XP_011513018 (OMIM: 611814) elongation of very lon ( 326) 697 176.3 7.1e-44
NP_068586 (OMIM: 611805,615957) elongation of very ( 299) 620 157.8 2.5e-38
NP_001288785 (OMIM: 611805,615957) elongation of v ( 299) 620 157.8 2.5e-38
NP_001229757 (OMIM: 611805,615957) elongation of v ( 326) 465 120.6 4.4e-27
NP_001229759 (OMIM: 611805,615957) elongation of v ( 262) 398 104.4 2.6e-22
NP_001124193 (OMIM: 611546) elongation of very lon ( 265) 318 85.1 1.6e-16
NP_076995 (OMIM: 611546) elongation of very long c ( 265) 318 85.1 1.6e-16
XP_011530536 (OMIM: 611546) elongation of very lon ( 265) 318 85.1 1.6e-16
XP_011530535 (OMIM: 611546) elongation of very lon ( 265) 318 85.1 1.6e-16
NP_689523 (OMIM: 611815) elongation of very long c ( 270) 294 79.4 9e-15
XP_011538547 (OMIM: 611815) elongation of very lon ( 270) 294 79.4 9e-15
XP_016866474 (OMIM: 611814) elongation of very lon ( 150) 195 55.4 8.3e-08
>>XP_006714758 (OMIM: 614451) elongation of very long ch (281 aa)
initn: 1956 init1: 1956 opt: 1956 Z-score: 2546.3 bits: 479.0 E(93482): 4.7e-135
Smith-Waterman score: 1956; 100.0% identity (100.0% similar) in 281 aa overlap (1-281:1-281)
10 20 30 40 50 60
pF1KE2 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC
190 200 210 220 230 240
250 260 270 280
pF1KE2 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKDN
:::::::::::::::::::::::::::::::::::::::::
XP_006 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKDN
250 260 270 280
>>NP_001098028 (OMIM: 614451) elongation of very long ch (281 aa)
initn: 1956 init1: 1956 opt: 1956 Z-score: 2546.3 bits: 479.0 E(93482): 4.7e-135
Smith-Waterman score: 1956; 100.0% identity (100.0% similar) in 281 aa overlap (1-281:1-281)
10 20 30 40 50 60
pF1KE2 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC
190 200 210 220 230 240
250 260 270 280
pF1KE2 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKDN
:::::::::::::::::::::::::::::::::::::::::
NP_001 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKDN
250 260 270 280
>>NP_079206 (OMIM: 614451) elongation of very long chain (281 aa)
initn: 1956 init1: 1956 opt: 1956 Z-score: 2546.3 bits: 479.0 E(93482): 4.7e-135
Smith-Waterman score: 1956; 100.0% identity (100.0% similar) in 281 aa overlap (1-281:1-281)
10 20 30 40 50 60
pF1KE2 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC
190 200 210 220 230 240
250 260 270 280
pF1KE2 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKDN
:::::::::::::::::::::::::::::::::::::::::
NP_079 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKDN
250 260 270 280
>>XP_005248663 (OMIM: 614451) elongation of very long ch (281 aa)
initn: 1956 init1: 1956 opt: 1956 Z-score: 2546.3 bits: 479.0 E(93482): 4.7e-135
Smith-Waterman score: 1956; 100.0% identity (100.0% similar) in 281 aa overlap (1-281:1-281)
10 20 30 40 50 60
pF1KE2 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC
190 200 210 220 230 240
250 260 270 280
pF1KE2 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKDN
:::::::::::::::::::::::::::::::::::::::::
XP_005 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKDN
250 260 270 280
>>XP_016865374 (OMIM: 614451) elongation of very long ch (281 aa)
initn: 1956 init1: 1956 opt: 1956 Z-score: 2546.3 bits: 479.0 E(93482): 4.7e-135
Smith-Waterman score: 1956; 100.0% identity (100.0% similar) in 281 aa overlap (1-281:1-281)
10 20 30 40 50 60
pF1KE2 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC
190 200 210 220 230 240
250 260 270 280
pF1KE2 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKDN
:::::::::::::::::::::::::::::::::::::::::
XP_016 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKDN
250 260 270 280
>>XP_011541953 (OMIM: 614451) elongation of very long ch (281 aa)
initn: 1956 init1: 1956 opt: 1956 Z-score: 2546.3 bits: 479.0 E(93482): 4.7e-135
Smith-Waterman score: 1956; 100.0% identity (100.0% similar) in 281 aa overlap (1-281:1-281)
10 20 30 40 50 60
pF1KE2 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC
190 200 210 220 230 240
250 260 270 280
pF1KE2 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKDN
:::::::::::::::::::::::::::::::::::::::::
XP_011 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKDN
250 260 270 280
>>XP_016865375 (OMIM: 614451) elongation of very long ch (268 aa)
initn: 1806 init1: 1806 opt: 1806 Z-score: 2351.7 bits: 442.9 E(93482): 3.3e-124
Smith-Waterman score: 1806; 100.0% identity (100.0% similar) in 259 aa overlap (23-281:10-268)
10 20 30 40 50 60
pF1KE2 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK
::::::::::::::::::::::::::::::::::::::
XP_016 MEKPINILYPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK
10 20 30 40
70 80 90 100 110 120
pF1KE2 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE2 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE2 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC
170 180 190 200 210 220
250 260 270 280
pF1KE2 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKDN
:::::::::::::::::::::::::::::::::::::::::
XP_016 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKDN
230 240 250 260
>>XP_005248664 (OMIM: 614451) elongation of very long ch (268 aa)
initn: 1806 init1: 1806 opt: 1806 Z-score: 2351.7 bits: 442.9 E(93482): 3.3e-124
Smith-Waterman score: 1806; 100.0% identity (100.0% similar) in 259 aa overlap (23-281:10-268)
10 20 30 40 50 60
pF1KE2 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK
::::::::::::::::::::::::::::::::::::::
XP_005 MEKPINILYPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK
10 20 30 40
70 80 90 100 110 120
pF1KE2 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE2 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE2 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC
170 180 190 200 210 220
250 260 270 280
pF1KE2 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKDN
:::::::::::::::::::::::::::::::::::::::::
XP_005 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKDN
230 240 250 260
>>XP_016865376 (OMIM: 614451) elongation of very long ch (268 aa)
initn: 1806 init1: 1806 opt: 1806 Z-score: 2351.7 bits: 442.9 E(93482): 3.3e-124
Smith-Waterman score: 1806; 100.0% identity (100.0% similar) in 259 aa overlap (23-281:10-268)
10 20 30 40 50 60
pF1KE2 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK
::::::::::::::::::::::::::::::::::::::
XP_016 MEKPINILYPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK
10 20 30 40
70 80 90 100 110 120
pF1KE2 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE2 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE2 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC
170 180 190 200 210 220
250 260 270 280
pF1KE2 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKDN
:::::::::::::::::::::::::::::::::::::::::
XP_016 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKDN
230 240 250 260
>>NP_001284546 (OMIM: 614451) elongation of very long ch (268 aa)
initn: 1806 init1: 1806 opt: 1806 Z-score: 2351.7 bits: 442.9 E(93482): 3.3e-124
Smith-Waterman score: 1806; 100.0% identity (100.0% similar) in 259 aa overlap (23-281:10-268)
10 20 30 40 50 60
pF1KE2 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK
::::::::::::::::::::::::::::::::::::::
NP_001 MEKPINILYPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK
10 20 30 40
70 80 90 100 110 120
pF1KE2 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE2 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE2 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC
170 180 190 200 210 220
250 260 270 280
pF1KE2 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKDN
:::::::::::::::::::::::::::::::::::::::::
NP_001 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKDN
230 240 250 260
281 residues in 1 query sequences
65951994 residues in 93482 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Jun 30 14:56:01 2019 done: Sun Jun 30 14:56:01 2019
Total Scan time: 2.840 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]