Result of FASTA (omim) for
pF1KE2735
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2735, 252 aa
1>>>pF1KE2735 252 - 252 aa - 252 aa
Library: /omim/omim.rfq.tfa
65089639 residues in 91964 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0311+/-0.000341; mu= 11.8431+/- 0.021
mean_var=115.0921+/-22.325, 0's: 0 Z-trim(118.0): 259 B-trim: 855 in 1/56
Lambda= 0.119551
statistics sampled from 31436 (31762) to 31436 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.725), E-opt: 0.2 (0.345), width: 16
Scan time: 3.130
The best scores are: opt bits E(91964)
NP_001184145 (OMIM: 108360) asialoglycoprotein rec ( 252) 1820 324.4 1.3e-88
XP_011522163 (OMIM: 108360) asialoglycoprotein rec ( 291) 1657 296.4 4.1e-80
NP_001662 (OMIM: 108360) asialoglycoprotein recept ( 291) 1657 296.4 4.1e-80
XP_024306525 (OMIM: 108361) asialoglycoprotein rec ( 248) 1123 204.2 1.9e-52
XP_006721587 (OMIM: 108361) asialoglycoprotein rec ( 248) 1123 204.2 1.9e-52
NP_550436 (OMIM: 108361) asialoglycoprotein recept ( 292) 1056 192.7 6.5e-49
NP_550434 (OMIM: 108361) asialoglycoprotein recept ( 311) 1056 192.7 6.9e-49
NP_001172 (OMIM: 108361) asialoglycoprotein recept ( 311) 1056 192.7 6.9e-49
XP_006721589 (OMIM: 108361) asialoglycoprotein rec ( 287) 1055 192.5 7.3e-49
XP_005256705 (OMIM: 108361) asialoglycoprotein rec ( 287) 1055 192.5 7.3e-49
NP_550435 (OMIM: 108361) asialoglycoprotein recept ( 287) 1055 192.5 7.3e-49
XP_011522167 (OMIM: 108361) asialoglycoprotein rec ( 299) 1055 192.6 7.5e-49
XP_011522168 (OMIM: 108361) asialoglycoprotein rec ( 299) 1055 192.6 7.5e-49
XP_011522165 (OMIM: 108361) asialoglycoprotein rec ( 299) 1055 192.6 7.5e-49
XP_024306524 (OMIM: 108361) asialoglycoprotein rec ( 306) 1055 192.6 7.6e-49
NP_001188281 (OMIM: 108361) asialoglycoprotein rec ( 306) 1055 192.6 7.6e-49
XP_011522166 (OMIM: 108361) asialoglycoprotein rec ( 318) 1055 192.6 7.8e-49
XP_024306523 (OMIM: 108361) asialoglycoprotein rec ( 379) 1055 192.7 8.9e-49
XP_016880140 (OMIM: 108361) asialoglycoprotein rec ( 292) 1053 192.2 9.4e-49
XP_011522164 (OMIM: 108361) asialoglycoprotein rec ( 410) 1055 192.7 9.4e-49
XP_016880142 (OMIM: 108361) asialoglycoprotein rec ( 311) 1053 192.2 9.8e-49
XP_016880141 (OMIM: 108361) asialoglycoprotein rec ( 311) 1053 192.2 9.8e-49
NP_001316999 (OMIM: 605999) C-type lectin domain f ( 289) 1024 187.2 3e-47
NP_006335 (OMIM: 605999) C-type lectin domain fami ( 292) 1023 187.0 3.4e-47
NP_878910 (OMIM: 605999) C-type lectin domain fami ( 316) 907 167.1 3.8e-41
XP_011521915 (OMIM: 605999) C-type lectin domain f ( 319) 906 166.9 4.3e-41
XP_011521917 (OMIM: 605999) C-type lectin domain f ( 315) 876 161.7 1.5e-39
XP_016882280 (OMIM: 616838) C-type lectin domain f ( 243) 380 76.1 7.2e-14
XP_016882279 (OMIM: 616838) C-type lectin domain f ( 293) 379 76.0 9.3e-14
XP_016882276 (OMIM: 616838) C-type lectin domain f ( 310) 379 76.0 9.7e-14
XP_016882277 (OMIM: 616838) C-type lectin domain f ( 310) 379 76.0 9.7e-14
XP_016882275 (OMIM: 616838) C-type lectin domain f ( 310) 379 76.0 9.7e-14
XP_016882274 (OMIM: 616838) C-type lectin domain f ( 310) 379 76.0 9.7e-14
XP_016882278 (OMIM: 616838) C-type lectin domain f ( 310) 379 76.0 9.7e-14
NP_001191047 (OMIM: 616838) C-type lectin domain f ( 378) 379 76.1 1.1e-13
NP_001138379 (OMIM: 605872) C-type lectin domain f ( 332) 378 75.8 1.1e-13
XP_011524043 (OMIM: 607621) collectin-12 isoform X ( 725) 379 76.3 1.8e-13
NP_569057 (OMIM: 607621) collectin-12 [Homo sapien ( 742) 379 76.3 1.8e-13
NP_001138366 (OMIM: 604672,607948,609423,614371) C ( 360) 372 74.8 2.5e-13
XP_005272529 (OMIM: 604672,607948,609423,614371) C ( 266) 370 74.4 2.5e-13
NP_001138368 (OMIM: 604672,607948,609423,614371) C ( 380) 372 74.9 2.6e-13
NP_066978 (OMIM: 604672,607948,609423,614371) CD20 ( 404) 372 74.9 2.7e-13
NP_001138381 (OMIM: 605872) C-type lectin domain f ( 353) 369 74.3 3.5e-13
XP_006722677 (OMIM: 605872) C-type lectin domain f ( 343) 368 74.1 3.9e-13
NP_001138376 (OMIM: 605872) C-type lectin domain f ( 348) 368 74.1 3.9e-13
XP_006722676 (OMIM: 605872) C-type lectin domain f ( 371) 368 74.2 4.1e-13
XP_006722675 (OMIM: 605872) C-type lectin domain f ( 371) 368 74.2 4.1e-13
NP_001138365 (OMIM: 604672,607948,609423,614371) C ( 268) 366 73.7 4.1e-13
NP_001138377 (OMIM: 605872) C-type lectin domain f ( 375) 368 74.2 4.1e-13
NP_001138382 (OMIM: 605872) C-type lectin domain f ( 376) 368 74.2 4.1e-13
>>NP_001184145 (OMIM: 108360) asialoglycoprotein recepto (252 aa)
initn: 1820 init1: 1820 opt: 1820 Z-score: 1712.6 bits: 324.4 E(91964): 1.3e-88
Smith-Waterman score: 1820; 100.0% identity (100.0% similar) in 252 aa overlap (1-252:1-252)
10 20 30 40 50 60
pF1KE2 MTKEYQDLQHLDNEESDHHQLRKDSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTKEYQDLQHLDNEESDHHQLRKDSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 RKMKSLESQLEKQQKDLSEDHSSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RKMKSLESQLEKQQKDLSEDHSSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 EHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 PWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCET
190 200 210 220 230 240
250
pF1KE2 ELDKASQEPPLL
::::::::::::
NP_001 ELDKASQEPPLL
250
>>XP_011522163 (OMIM: 108360) asialoglycoprotein recepto (291 aa)
initn: 1657 init1: 1657 opt: 1657 Z-score: 1559.9 bits: 296.4 E(91964): 4.1e-80
Smith-Waterman score: 1679; 85.9% identity (86.3% similar) in 284 aa overlap (8-252:8-291)
10 20
pF1KE2 MTKEYQDLQHLDNEESDHHQLRK-------------------------------------
::::::::::::::::
XP_011 MTKEYQDLQHLDNEESDHHQLRKGPPPPQPLLQRLCSGPRLLLLSLGLSLLLLVVVCVIG
10 20 30 40 50 60
30 40 50 60 70 80
pF1KE2 --DSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDH
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SQNSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDH
70 80 90 100 110 120
90 100 110 120 130 140
pF1KE2 SSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWVEHERSCYWFSRSGKAWADADN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWVEHERSCYWFSRSGKAWADADN
130 140 150 160 170 180
150 160 170 180 190 200
pF1KE2 YCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNWRPEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNWRPEQ
190 200 210 220 230 240
210 220 230 240 250
pF1KE2 PDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQEPPLL
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQEPPLL
250 260 270 280 290
>>NP_001662 (OMIM: 108360) asialoglycoprotein receptor 1 (291 aa)
initn: 1657 init1: 1657 opt: 1657 Z-score: 1559.9 bits: 296.4 E(91964): 4.1e-80
Smith-Waterman score: 1679; 85.9% identity (86.3% similar) in 284 aa overlap (8-252:8-291)
10 20
pF1KE2 MTKEYQDLQHLDNEESDHHQLRK-------------------------------------
::::::::::::::::
NP_001 MTKEYQDLQHLDNEESDHHQLRKGPPPPQPLLQRLCSGPRLLLLSLGLSLLLLVVVCVIG
10 20 30 40 50 60
30 40 50 60 70 80
pF1KE2 --DSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDH
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQNSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDH
70 80 90 100 110 120
90 100 110 120 130 140
pF1KE2 SSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWVEHERSCYWFSRSGKAWADADN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWVEHERSCYWFSRSGKAWADADN
130 140 150 160 170 180
150 160 170 180 190 200
pF1KE2 YCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNWRPEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNWRPEQ
190 200 210 220 230 240
210 220 230 240 250
pF1KE2 PDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQEPPLL
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQEPPLL
250 260 270 280 290
>>XP_024306525 (OMIM: 108361) asialoglycoprotein recepto (248 aa)
initn: 1070 init1: 1070 opt: 1123 Z-score: 1063.0 bits: 204.2 E(91964): 1.9e-52
Smith-Waterman score: 1123; 60.7% identity (87.0% similar) in 239 aa overlap (1-239:1-238)
10 20 30 40 50 60
pF1KE2 MTKEYQDLQHLDNEESDHHQLRKDSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVG
:.:..::.:.:..::.:: ... .::: :::.:.:.::::..:: ..:...::.::.::
XP_024 MAKDFQDIQQLSSEENDH-PFHQGAQLQAELRSLKEAFSNFSSSTLTEVQAISTHGGSVG
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 RKMKSLESQLEKQQKDLSEDHSSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWV
:. :: ..:::::.::. ::..::.:.:.: ::: ..::: :..:::.:::::::::
XP_024 DKITSLGAKLEKQQQDLKADHDALLFHLKHFPVDLRFVACQMELLHSNGSQRTCCPVNWV
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 EHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNG
::. ::::::.::::::.:..::.::.:::::..:::::::. .: .: :::.:: :..:
XP_024 EHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTWIGLTDSDG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE2 PWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCET
:::::::::. ..::: :::.:.:: :::.:::.. ::::::: : . ::::::
XP_024 SWKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQPDGRWNDDFCLQVYRWVCEK
180 190 200 210 220 230
250
pF1KE2 ELDKASQEPPLL
XP_024 RRNATGEVA
240
>>XP_006721587 (OMIM: 108361) asialoglycoprotein recepto (248 aa)
initn: 1070 init1: 1070 opt: 1123 Z-score: 1063.0 bits: 204.2 E(91964): 1.9e-52
Smith-Waterman score: 1123; 60.7% identity (87.0% similar) in 239 aa overlap (1-239:1-238)
10 20 30 40 50 60
pF1KE2 MTKEYQDLQHLDNEESDHHQLRKDSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVG
:.:..::.:.:..::.:: ... .::: :::.:.:.::::..:: ..:...::.::.::
XP_006 MAKDFQDIQQLSSEENDH-PFHQGAQLQAELRSLKEAFSNFSSSTLTEVQAISTHGGSVG
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 RKMKSLESQLEKQQKDLSEDHSSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWV
:. :: ..:::::.::. ::..::.:.:.: ::: ..::: :..:::.:::::::::
XP_006 DKITSLGAKLEKQQQDLKADHDALLFHLKHFPVDLRFVACQMELLHSNGSQRTCCPVNWV
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 EHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNG
::. ::::::.::::::.:..::.::.:::::..:::::::. .: .: :::.:: :..:
XP_006 EHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTWIGLTDSDG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE2 PWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCET
:::::::::. ..::: :::.:.:: :::.:::.. ::::::: : . ::::::
XP_006 SWKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQPDGRWNDDFCLQVYRWVCEK
180 190 200 210 220 230
250
pF1KE2 ELDKASQEPPLL
XP_006 RRNATGEVA
240
>>NP_550436 (OMIM: 108361) asialoglycoprotein receptor 2 (292 aa)
initn: 1122 init1: 1055 opt: 1056 Z-score: 999.7 bits: 192.7 E(91964): 6.5e-49
Smith-Waterman score: 1056; 60.9% identity (85.3% similar) in 225 aa overlap (15-239:61-282)
10 20 30 40
pF1KE2 MTKEYQDLQHLDNEESDHHQLRKDSQLQEELRGLRETFSNFTAS
.:. : . .::: :::.:.:.::::..:
NP_550 AQRLCSMVCFSLLALSFNILLLVVICVTGSQSEGH---RGAQLQAELRSLKEAFSNFSSS
40 50 60 70 80
50 60 70 80 90 100
pF1KE2 TEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDHSSLLLHVKQFVSDLRSLSCQMAA
: ..:...::.::.:: :. :: ..:::::.::. ::..::.:.:.: ::: ..:::
NP_550 TLTEVQAISTHGGSVGDKITSLGAKLEKQQQDLKADHDALLFHLKHFPVDLRFVACQMEL
90 100 110 120 130 140
110 120 130 140 150 160
pF1KE2 LQGNGSERTCCPVNWVEHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQH
:..:::.:::::::::::. ::::::.::::::.:..::.::.:::::..:::::::. .
NP_550 LHSNGSQRTCCPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQ
150 160 170 180 190 200
170 180 190 200 210 220
pF1KE2 HIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDDGR
: .: :::.:: :..: :::::::::. ..::: :::.:.:: :::.:::.. :::
NP_550 HTNPFNTWIGLTDSDGSWKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQPDGR
210 220 230 240 250 260
230 240 250
pF1KE2 WNDDVCQRPYRWVCETELDKASQEPPLL
:::: : . ::::::
NP_550 WNDDFCLQVYRWVCEKRRNATGEVA
270 280 290
>>NP_550434 (OMIM: 108361) asialoglycoprotein receptor 2 (311 aa)
initn: 1122 init1: 1055 opt: 1056 Z-score: 999.3 bits: 192.7 E(91964): 6.9e-49
Smith-Waterman score: 1056; 60.9% identity (85.3% similar) in 225 aa overlap (15-239:80-301)
10 20 30 40
pF1KE2 MTKEYQDLQHLDNEESDHHQLRKDSQLQEELRGLRETFSNFTAS
.:. : . .::: :::.:.:.::::..:
NP_550 AQRLCSMVCFSLLALSFNILLLVVICVTGSQSEGH---RGAQLQAELRSLKEAFSNFSSS
50 60 70 80 90 100
50 60 70 80 90 100
pF1KE2 TEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDHSSLLLHVKQFVSDLRSLSCQMAA
: ..:...::.::.:: :. :: ..:::::.::. ::..::.:.:.: ::: ..:::
NP_550 TLTEVQAISTHGGSVGDKITSLGAKLEKQQQDLKADHDALLFHLKHFPVDLRFVACQMEL
110 120 130 140 150 160
110 120 130 140 150 160
pF1KE2 LQGNGSERTCCPVNWVEHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQH
:..:::.:::::::::::. ::::::.::::::.:..::.::.:::::..:::::::. .
NP_550 LHSNGSQRTCCPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQ
170 180 190 200 210 220
170 180 190 200 210 220
pF1KE2 HIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDDGR
: .: :::.:: :..: :::::::::. ..::: :::.:.:: :::.:::.. :::
NP_550 HTNPFNTWIGLTDSDGSWKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQPDGR
230 240 250 260 270 280
230 240 250
pF1KE2 WNDDVCQRPYRWVCETELDKASQEPPLL
:::: : . ::::::
NP_550 WNDDFCLQVYRWVCEKRRNATGEVA
290 300 310
>>NP_001172 (OMIM: 108361) asialoglycoprotein receptor 2 (311 aa)
initn: 1122 init1: 1055 opt: 1056 Z-score: 999.3 bits: 192.7 E(91964): 6.9e-49
Smith-Waterman score: 1056; 60.9% identity (85.3% similar) in 225 aa overlap (15-239:80-301)
10 20 30 40
pF1KE2 MTKEYQDLQHLDNEESDHHQLRKDSQLQEELRGLRETFSNFTAS
.:. : . .::: :::.:.:.::::..:
NP_001 AQRLCSMVCFSLLALSFNILLLVVICVTGSQSEGH---RGAQLQAELRSLKEAFSNFSSS
50 60 70 80 90 100
50 60 70 80 90 100
pF1KE2 TEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDHSSLLLHVKQFVSDLRSLSCQMAA
: ..:...::.::.:: :. :: ..:::::.::. ::..::.:.:.: ::: ..:::
NP_001 TLTEVQAISTHGGSVGDKITSLGAKLEKQQQDLKADHDALLFHLKHFPVDLRFVACQMEL
110 120 130 140 150 160
110 120 130 140 150 160
pF1KE2 LQGNGSERTCCPVNWVEHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQH
:..:::.:::::::::::. ::::::.::::::.:..::.::.:::::..:::::::. .
NP_001 LHSNGSQRTCCPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQ
170 180 190 200 210 220
170 180 190 200 210 220
pF1KE2 HIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDDGR
: .: :::.:: :..: :::::::::. ..::: :::.:.:: :::.:::.. :::
NP_001 HTNPFNTWIGLTDSDGSWKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQPDGR
230 240 250 260 270 280
230 240 250
pF1KE2 WNDDVCQRPYRWVCETELDKASQEPPLL
:::: : . ::::::
NP_001 WNDDFCLQVYRWVCEKRRNATGEVA
290 300 310
>>XP_006721589 (OMIM: 108361) asialoglycoprotein recepto (287 aa)
initn: 1122 init1: 1055 opt: 1055 Z-score: 998.8 bits: 192.5 E(91964): 7.3e-49
Smith-Waterman score: 1055; 62.2% identity (87.1% similar) in 217 aa overlap (23-239:61-277)
10 20 30 40 50
pF1KE2 MTKEYQDLQHLDNEESDHHQLRKDSQLQEELRGLRETFSNFTASTEAQVKGL
...::: :::.:.:.::::..:: ..:...
XP_006 AQRLCSMVCFSLLALSFNILLLVVICVTGSQSAQLQAELRSLKEAFSNFSSSTLTEVQAI
40 50 60 70 80 90
60 70 80 90 100 110
pF1KE2 STQGGNVGRKMKSLESQLEKQQKDLSEDHSSLLLHVKQFVSDLRSLSCQMAALQGNGSER
::.::.:: :. :: ..:::::.::. ::..::.:.:.: ::: ..::: :..:::.:
XP_006 STHGGSVGDKITSLGAKLEKQQQDLKADHDALLFHLKHFPVDLRFVACQMELLHSNGSQR
100 110 120 130 140 150
120 130 140 150 160 170
pF1KE2 TCCPVNWVEHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNTW
::::::::::. ::::::.::::::.:..::.::.:::::..:::::::. .: .: :::
XP_006 TCCPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTW
160 170 180 190 200 210
180 190 200 210 220 230
pF1KE2 MGLHDQNGPWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDDGRWNDDVCQR
.:: :..: :::::::::. ..::: :::.:.:: :::.:::.. ::::::: : .
XP_006 IGLTDSDGSWKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQPDGRWNDDFCLQ
220 230 240 250 260 270
240 250
pF1KE2 PYRWVCETELDKASQEPPLL
::::::
XP_006 VYRWVCEKRRNATGEVA
280
>>XP_005256705 (OMIM: 108361) asialoglycoprotein recepto (287 aa)
initn: 1122 init1: 1055 opt: 1055 Z-score: 998.8 bits: 192.5 E(91964): 7.3e-49
Smith-Waterman score: 1055; 62.2% identity (87.1% similar) in 217 aa overlap (23-239:61-277)
10 20 30 40 50
pF1KE2 MTKEYQDLQHLDNEESDHHQLRKDSQLQEELRGLRETFSNFTASTEAQVKGL
...::: :::.:.:.::::..:: ..:...
XP_005 AQRLCSMVCFSLLALSFNILLLVVICVTGSQSAQLQAELRSLKEAFSNFSSSTLTEVQAI
40 50 60 70 80 90
60 70 80 90 100 110
pF1KE2 STQGGNVGRKMKSLESQLEKQQKDLSEDHSSLLLHVKQFVSDLRSLSCQMAALQGNGSER
::.::.:: :. :: ..:::::.::. ::..::.:.:.: ::: ..::: :..:::.:
XP_005 STHGGSVGDKITSLGAKLEKQQQDLKADHDALLFHLKHFPVDLRFVACQMELLHSNGSQR
100 110 120 130 140 150
120 130 140 150 160 170
pF1KE2 TCCPVNWVEHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNTW
::::::::::. ::::::.::::::.:..::.::.:::::..:::::::. .: .: :::
XP_005 TCCPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTW
160 170 180 190 200 210
180 190 200 210 220 230
pF1KE2 MGLHDQNGPWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDDGRWNDDVCQR
.:: :..: :::::::::. ..::: :::.:.:: :::.:::.. ::::::: : .
XP_005 IGLTDSDGSWKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQPDGRWNDDFCLQ
220 230 240 250 260 270
240 250
pF1KE2 PYRWVCETELDKASQEPPLL
::::::
XP_005 VYRWVCEKRRNATGEVA
280
252 residues in 1 query sequences
65089639 residues in 91964 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Oct 23 17:42:36 2018 done: Tue Oct 23 17:42:36 2018
Total Scan time: 3.130 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]