Result of FASTA (ccds) for
pF1KE2735
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2735, 252 aa
1>>>pF1KE2735 252 - 252 aa - 252 aa
Library: human.CCDS.faa
18921897 residues in 33420 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8609+/-0.000763; mu= 12.5720+/- 0.046
mean_var=96.9538+/-18.662, 0's: 0 Z-trim(110.6): 126 B-trim: 0 in 0/53
Lambda= 0.130254
statistics sampled from 11783 (11916) to 11783 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.735), E-opt: 0.2 (0.357), width: 16
Scan time: 1.080
The best scores are: opt bits E(33420)
CCDS56017.1 ASGR1 gene_id:432|Hs109|chr17 ( 252) 1820 351.8 2.6e-97
CCDS11089.1 ASGR1 gene_id:432|Hs109|chr17 ( 291) 1657 321.3 4.8e-88
CCDS11088.1 ASGR2 gene_id:433|Hs109|chr17 ( 287) 1055 208.1 5.4e-54
CCDS45598.1 ASGR2 gene_id:433|Hs109|chr17 ( 292) 1053 207.7 7.1e-54
CCDS32544.1 ASGR2 gene_id:433|Hs109|chr17 ( 311) 1053 207.8 7.5e-54
CCDS82049.1 CLEC10A gene_id:10462|Hs109|chr17 ( 289) 1024 202.3 3.1e-52
CCDS45597.1 CLEC10A gene_id:10462|Hs109|chr17 ( 292) 1023 202.1 3.5e-52
CCDS11087.1 CLEC10A gene_id:10462|Hs109|chr17 ( 316) 907 180.3 1.4e-45
CCDS56087.1 CLEC17A gene_id:388512|Hs109|chr19 ( 378) 379 81.2 1.2e-15
CCDS32782.1 COLEC12 gene_id:81035|Hs109|chr18 ( 742) 379 81.4 1.9e-15
CCDS45949.1 CD209 gene_id:30835|Hs109|chr19 ( 360) 372 79.8 2.8e-15
CCDS45950.1 CD209 gene_id:30835|Hs109|chr19 ( 380) 372 79.9 2.9e-15
CCDS12186.1 CD209 gene_id:30835|Hs109|chr19 ( 404) 372 79.9 3e-15
CCDS59344.1 CD209 gene_id:30835|Hs109|chr19 ( 268) 366 78.6 4.9e-15
CCDS12187.1 CLEC4M gene_id:10332|Hs109|chr19 ( 399) 368 79.1 5.1e-15
CCDS45952.1 CD209 gene_id:30835|Hs109|chr19 ( 312) 366 78.7 5.5e-15
CCDS12184.1 FCER2 gene_id:2208|Hs109|chr19 ( 321) 362 77.9 9.4e-15
CCDS59345.1 CD209 gene_id:30835|Hs109|chr19 ( 243) 360 77.5 9.8e-15
CCDS59347.1 CLEC4M gene_id:10332|Hs109|chr19 ( 263) 358 77.1 1.4e-14
CCDS45951.1 CD209 gene_id:30835|Hs109|chr19 ( 398) 350 75.7 5.3e-14
CCDS8594.1 CLEC4E gene_id:26253|Hs109|chr12 ( 219) 333 72.4 3.1e-13
CCDS12185.1 CLEC4G gene_id:339390|Hs109|chr19 ( 293) 322 70.4 1.6e-12
CCDS47242.1 VCAN gene_id:1462|Hs109|chr5 ( 655) 317 69.7 5.7e-12
CCDS54875.1 VCAN gene_id:1462|Hs109|chr5 (1642) 317 70.0 1.1e-11
CCDS54876.1 VCAN gene_id:1462|Hs109|chr5 (2409) 317 70.2 1.5e-11
CCDS4060.1 VCAN gene_id:1462|Hs109|chr5 (3396) 317 70.3 2e-11
CCDS12397.1 NCAN gene_id:1463|Hs109|chr19 (1321) 311 68.8 2.1e-11
CCDS41745.1 CLEC4A gene_id:50856|Hs109|chr12 ( 198) 297 65.6 3.1e-11
CCDS8590.1 CLEC4A gene_id:50856|Hs109|chr12 ( 237) 297 65.6 3.5e-11
CCDS8591.1 CLEC4A gene_id:50856|Hs109|chr12 ( 165) 292 64.5 5.1e-11
CCDS8592.1 CLEC4A gene_id:50856|Hs109|chr12 ( 204) 292 64.6 6.1e-11
CCDS53970.1 ACAN gene_id:176|Hs109|chr15 (2530) 304 67.7 8.7e-11
>>CCDS56017.1 ASGR1 gene_id:432|Hs109|chr17 (252 aa)
initn: 1820 init1: 1820 opt: 1820 Z-score: 1860.7 bits: 351.8 E(33420): 2.6e-97
Smith-Waterman score: 1820; 100.0% identity (100.0% similar) in 252 aa overlap (1-252:1-252)
10 20 30 40 50 60
pF1KE2 MTKEYQDLQHLDNEESDHHQLRKDSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MTKEYQDLQHLDNEESDHHQLRKDSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 RKMKSLESQLEKQQKDLSEDHSSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 RKMKSLESQLEKQQKDLSEDHSSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 EHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 EHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 PWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCET
190 200 210 220 230 240
250
pF1KE2 ELDKASQEPPLL
::::::::::::
CCDS56 ELDKASQEPPLL
250
>>CCDS11089.1 ASGR1 gene_id:432|Hs109|chr17 (291 aa)
initn: 1657 init1: 1657 opt: 1657 Z-score: 1694.3 bits: 321.3 E(33420): 4.8e-88
Smith-Waterman score: 1679; 85.9% identity (86.3% similar) in 284 aa overlap (8-252:8-291)
10 20
pF1KE2 MTKEYQDLQHLDNEESDHHQLRK-------------------------------------
::::::::::::::::
CCDS11 MTKEYQDLQHLDNEESDHHQLRKGPPPPQPLLQRLCSGPRLLLLSLGLSLLLLVVVCVIG
10 20 30 40 50 60
30 40 50 60 70 80
pF1KE2 --DSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDH
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SQNSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDH
70 80 90 100 110 120
90 100 110 120 130 140
pF1KE2 SSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWVEHERSCYWFSRSGKAWADADN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWVEHERSCYWFSRSGKAWADADN
130 140 150 160 170 180
150 160 170 180 190 200
pF1KE2 YCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNWRPEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 YCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNWRPEQ
190 200 210 220 230 240
210 220 230 240 250
pF1KE2 PDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQEPPLL
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQEPPLL
250 260 270 280 290
>>CCDS11088.1 ASGR2 gene_id:433|Hs109|chr17 (287 aa)
initn: 1122 init1: 1055 opt: 1055 Z-score: 1083.0 bits: 208.1 E(33420): 5.4e-54
Smith-Waterman score: 1055; 62.2% identity (87.1% similar) in 217 aa overlap (23-239:61-277)
10 20 30 40 50
pF1KE2 MTKEYQDLQHLDNEESDHHQLRKDSQLQEELRGLRETFSNFTASTEAQVKGL
...::: :::.:.:.::::..:: ..:...
CCDS11 AQRLCSMVCFSLLALSFNILLLVVICVTGSQSAQLQAELRSLKEAFSNFSSSTLTEVQAI
40 50 60 70 80 90
60 70 80 90 100 110
pF1KE2 STQGGNVGRKMKSLESQLEKQQKDLSEDHSSLLLHVKQFVSDLRSLSCQMAALQGNGSER
::.::.:: :. :: ..:::::.::. ::..::.:.:.: ::: ..::: :..:::.:
CCDS11 STHGGSVGDKITSLGAKLEKQQQDLKADHDALLFHLKHFPVDLRFVACQMELLHSNGSQR
100 110 120 130 140 150
120 130 140 150 160 170
pF1KE2 TCCPVNWVEHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNTW
::::::::::. ::::::.::::::.:..::.::.:::::..:::::::. .: .: :::
CCDS11 TCCPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTW
160 170 180 190 200 210
180 190 200 210 220 230
pF1KE2 MGLHDQNGPWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDDGRWNDDVCQR
.:: :..: :::::::::. ..::: :::.:.:: :::.:::.. ::::::: : .
CCDS11 IGLTDSDGSWKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQPDGRWNDDFCLQ
220 230 240 250 260 270
240 250
pF1KE2 PYRWVCETELDKASQEPPLL
::::::
CCDS11 VYRWVCEKRRNATGEVA
280
>>CCDS45598.1 ASGR2 gene_id:433|Hs109|chr17 (292 aa)
initn: 1120 init1: 1053 opt: 1053 Z-score: 1080.9 bits: 207.7 E(33420): 7.1e-54
Smith-Waterman score: 1053; 62.8% identity (87.0% similar) in 215 aa overlap (25-239:68-282)
10 20 30 40 50
pF1KE2 MTKEYQDLQHLDNEESDHHQLRKDSQLQEELRGLRETFSNFTASTEAQVKGLST
.::: :::.:.:.::::..:: ..:...::
CCDS45 VCFSLLALSFNILLLVVICVTGSQSEGHGGAQLQAELRSLKEAFSNFSSSTLTEVQAIST
40 50 60 70 80 90
60 70 80 90 100 110
pF1KE2 QGGNVGRKMKSLESQLEKQQKDLSEDHSSLLLHVKQFVSDLRSLSCQMAALQGNGSERTC
.::.:: :. :: ..:::::.::. ::..::.:.:.: ::: ..::: :..:::.:::
CCDS45 HGGSVGDKITSLGAKLEKQQQDLKADHDALLFHLKHFPVDLRFVACQMELLHSNGSQRTC
100 110 120 130 140 150
120 130 140 150 160 170
pF1KE2 CPVNWVEHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMG
::::::::. ::::::.::::::.:..::.::.:::::..:::::::. .: .: :::.:
CCDS45 CPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTWIG
160 170 180 190 200 210
180 190 200 210 220 230
pF1KE2 LHDQNGPWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPY
: :..: :::::::::. ..::: :::.:.:: :::.:::.. ::::::: : . :
CCDS45 LTDSDGSWKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQPDGRWNDDFCLQVY
220 230 240 250 260 270
240 250
pF1KE2 RWVCETELDKASQEPPLL
:::::
CCDS45 RWVCEKRRNATGEVA
280 290
>>CCDS32544.1 ASGR2 gene_id:433|Hs109|chr17 (311 aa)
initn: 1120 init1: 1053 opt: 1053 Z-score: 1080.5 bits: 207.8 E(33420): 7.5e-54
Smith-Waterman score: 1053; 62.8% identity (87.0% similar) in 215 aa overlap (25-239:87-301)
10 20 30 40 50
pF1KE2 MTKEYQDLQHLDNEESDHHQLRKDSQLQEELRGLRETFSNFTASTEAQVKGLST
.::: :::.:.:.::::..:: ..:...::
CCDS32 VCFSLLALSFNILLLVVICVTGSQSEGHGGAQLQAELRSLKEAFSNFSSSTLTEVQAIST
60 70 80 90 100 110
60 70 80 90 100 110
pF1KE2 QGGNVGRKMKSLESQLEKQQKDLSEDHSSLLLHVKQFVSDLRSLSCQMAALQGNGSERTC
.::.:: :. :: ..:::::.::. ::..::.:.:.: ::: ..::: :..:::.:::
CCDS32 HGGSVGDKITSLGAKLEKQQQDLKADHDALLFHLKHFPVDLRFVACQMELLHSNGSQRTC
120 130 140 150 160 170
120 130 140 150 160 170
pF1KE2 CPVNWVEHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMG
::::::::. ::::::.::::::.:..::.::.:::::..:::::::. .: .: :::.:
CCDS32 CPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTWIG
180 190 200 210 220 230
180 190 200 210 220 230
pF1KE2 LHDQNGPWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPY
: :..: :::::::::. ..::: :::.:.:: :::.:::.. ::::::: : . :
CCDS32 LTDSDGSWKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQPDGRWNDDFCLQVY
240 250 260 270 280 290
240 250
pF1KE2 RWVCETELDKASQEPPLL
:::::
CCDS32 RWVCEKRRNATGEVA
300 310
>>CCDS82049.1 CLEC10A gene_id:10462|Hs109|chr17 (289 aa)
initn: 808 init1: 808 opt: 1024 Z-score: 1051.5 bits: 202.3 E(33420): 3.1e-52
Smith-Waterman score: 1024; 58.6% identity (86.3% similar) in 227 aa overlap (23-248:61-287)
10 20 30 40 50
pF1KE2 MTKEYQDLQHLDNEESDHHQLRKDSQLQEELRGLRETFSNFTASTEAQVKGL
..:..:..: :: :::::..: :....:
CCDS82 LQRLCSGPCHLLLSLGLGLLLLVIICVVGFQNSKFQRDLVTLRTDFSNFTSNTVAEIQAL
40 50 60 70 80 90
60 70 80 90 100 110
pF1KE2 STQGGNVGRKMKSLESQLEKQQKDLSEDHSSLLLHVKQFVSDLRSLSCQMAALQGNGS-E
..::... . . ::....: ... . :: .::.:.:.:.::..:.::.:.:..:.: :
CCDS82 TSQGSSLEETIASLKAEVEGFKQERQAVHSEMLLRVQQLVQDLKKLTCQVATLNNNASTE
100 110 120 130 140 150
120 130 140 150 160 170
pF1KE2 RTCCPVNWVEHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNT
::::::::::. ::::::.:: .::.:..::.:..:::::..: :::.:::...: . :
CCDS82 GTCCPVNWVEHQDSCYWFSHSGMSWAEAEKYCQLKNAHLVVINSREEQNFVQKYLGSAYT
160 170 180 190 200 210
180 190 200 210 220 230
pF1KE2 WMGLHDQNGPWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDDGRWNDDVCQ
:::: : .: ::::::::: :::.::.: ::::: ::::::::::::: ::::::::::
CCDS82 WMGLSDPEGAWKWVDGTDYATGFQNWKPGQPDDWQGHGLGGGEDCAHFHPDGRWNDDVCQ
220 230 240 250 260 270
240 250
pF1KE2 RPYRWVCETELDKASQEPPLL
:::.::::. : ..:::
CCDS82 RPYHWVCEAGLGQTSQESH
280
>>CCDS45597.1 CLEC10A gene_id:10462|Hs109|chr17 (292 aa)
initn: 1011 init1: 808 opt: 1023 Z-score: 1050.4 bits: 202.1 E(33420): 3.5e-52
Smith-Waterman score: 1023; 57.8% identity (85.2% similar) in 230 aa overlap (23-248:61-290)
10 20 30 40 50
pF1KE2 MTKEYQDLQHLDNEESDHHQLRKDSQLQEELRGLRETFSNFTASTEAQVKGL
..:..:..: :: :::::..: :....:
CCDS45 LQRLCSGPCHLLLSLGLGLLLLVIICVVGFQNSKFQRDLVTLRTDFSNFTSNTVAEIQAL
40 50 60 70 80 90
60 70 80 90 100
pF1KE2 STQGGNVGRKMKSLESQLEKQQKDLSEDHSSLLLHVKQFVSDLRSLSCQMAALQGNG---
..::... . . ::....: ... . :: .::.:.:.:.::..:.::.:.:..::
CCDS45 TSQGSSLEETIASLKAEVEGFKQERQAVHSEMLLRVQQLVQDLKKLTCQVATLNNNGEEA
100 110 120 130 140 150
110 120 130 140 150 160
pF1KE2 -SERTCCPVNWVEHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGP
.: ::::::::::. ::::::.:: .::.:..::.:..:::::..: :::.:::...:
CCDS45 STEGTCCPVNWVEHQDSCYWFSHSGMSWAEAEKYCQLKNAHLVVINSREEQNFVQKYLGS
160 170 180 190 200 210
170 180 190 200 210 220
pF1KE2 VNTWMGLHDQNGPWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDDGRWNDD
. ::::: : .: ::::::::: :::.::.: ::::: ::::::::::::: :::::::
CCDS45 AYTWMGLSDPEGAWKWVDGTDYATGFQNWKPGQPDDWQGHGLGGGEDCAHFHPDGRWNDD
220 230 240 250 260 270
230 240 250
pF1KE2 VCQRPYRWVCETELDKASQEPPLL
::::::.::::. : ..:::
CCDS45 VCQRPYHWVCEAGLGQTSQESH
280 290
>>CCDS11087.1 CLEC10A gene_id:10462|Hs109|chr17 (316 aa)
initn: 898 init1: 808 opt: 907 Z-score: 932.2 bits: 180.3 E(33420): 1.4e-45
Smith-Waterman score: 978; 53.9% identity (78.7% similar) in 254 aa overlap (23-248:61-314)
10 20 30 40 50
pF1KE2 MTKEYQDLQHLDNEESDHHQLRKDSQLQEELRGLRETFSNFTASTEAQVKGL
..:..:..: :: :::::..: :....:
CCDS11 LQRLCSGPCHLLLSLGLGLLLLVIICVVGFQNSKFQRDLVTLRTDFSNFTSNTVAEIQAL
40 50 60 70 80 90
60 70 80
pF1KE2 STQGGNVGRKMKSLESQLE--KQQK-----DLSED--------------------HSSLL
..::... . . ::....: ::.. .:.: :: .:
CCDS11 TSQGSSLEETIASLKAEVEGFKQERQAGVSELQEHTTQKAHLGHCPHCPSVCVPVHSEML
100 110 120 130 140 150
90 100 110 120 130 140
pF1KE2 LHVKQFVSDLRSLSCQMAALQGNGS-ERTCCPVNWVEHERSCYWFSRSGKAWADADNYCR
:.:.:.:.::..:.::.:.:..:.: : ::::::::::. ::::::.:: .::.:..::.
CCDS11 LRVQQLVQDLKKLTCQVATLNNNASTEGTCCPVNWVEHQDSCYWFSHSGMSWAEAEKYCQ
160 170 180 190 200 210
150 160 170 180 190 200
pF1KE2 LEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNWRPEQPDD
:..:::::..: :::.:::...: . ::::: : .: ::::::::: :::.::.: ::::
CCDS11 LKNAHLVVINSREEQNFVQKYLGSAYTWMGLSDPEGAWKWVDGTDYATGFQNWKPGQPDD
220 230 240 250 260 270
210 220 230 240 250
pF1KE2 WYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQEPPLL
: ::::::::::::: :::::::::::::.::::. : ..:::
CCDS11 WQGHGLGGGEDCAHFHPDGRWNDDVCQRPYHWVCEAGLGQTSQESH
280 290 300 310
>>CCDS56087.1 CLEC17A gene_id:388512|Hs109|chr19 (378 aa)
initn: 261 init1: 167 opt: 379 Z-score: 394.9 bits: 81.2 E(33420): 1.2e-15
Smith-Waterman score: 379; 35.0% identity (62.5% similar) in 160 aa overlap (85-239:222-373)
60 70 80 90 100 110
pF1KE2 QGGNVGRKMKSLESQLEKQQKDLSEDHSSLLLHVKQFVSDLRSLSCQ-MAALQGN-GSER
: .:. .. .:. . : .. : : .:
CCDS56 LIKYQELMEELRMLSFQQMTWRTNMTGMAGLAGLKHDIARVRADTNQSLVELWGLLDCRR
200 210 220 230 240 250
120 130 140 150 160 170
pF1KE2 TCCPVNWVEHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFV-QHHIGPVNT
:: .:. : .::.:: : :.: .: .:. . .:::...:. :..:: . : .:
CCDS56 ITCPEGWLPFEGKCYYFSPSTKSWDEARMFCQENYSHLVIINSFAEHNFVAKAHGSPRVY
260 270 280 290 300 310
180 190 200 210 220
pF1KE2 WMGLHD--QNGPWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDDGRWNDDV
:.::.: :.: :.:.::. .: :.::.:.. . :::: .. : :::
CCDS56 WLGLNDRAQEGDWRWLDGSPVTLSF--WEPEEPNNIHD------EDCATMNKGGTWNDLS
320 330 340 350 360
230 240 250
pF1KE2 CQRPYRWVCETELDKASQEPPLL
: . :.::
CCDS56 CYKTTYWICERKCSC
370
>>CCDS32782.1 COLEC12 gene_id:81035|Hs109|chr18 (742 aa)
initn: 321 init1: 208 opt: 379 Z-score: 390.8 bits: 81.4 E(33420): 1.9e-15
Smith-Waterman score: 379; 37.5% identity (66.7% similar) in 144 aa overlap (104-241:593-733)
80 90 100 110 120 130
pF1KE2 QKDLSEDHSSLLLHVKQFVSDLRSLSCQMAALQGNGS---ERTCCPVNWVEHERSCYWFS
:::.. . : . :: .: . .::.::
CCDS32 GLPGLPGVPGMPGPKGPPGPPGPSGAVVPLALQNEPTPAPEDNGCPPHWKNFTDKCYYFS
570 580 590 600 610 620
140 150 160 170 180
pF1KE2 RSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQHH-IGPVNTWMGLHD--QNGPWKWVDG
. . :: .:. ...::: ... :::...... .: . :.:: : ... :::.::
CCDS32 VEKEIFEDAKLFCEDKSSHLVFINTREEQQWIKKQMVGRESHWIGLTDSERENEWKWLDG
630 640 650 660 670 680
190 200 210 220 230 240
pF1KE2 TDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQ
:. . .:::. :::.: ::: : ::::: . :.::: :. ..:: .
CCDS32 TSPD--YKNWKAGQPDNW-GHGHGPGEDCAGLIYAGQWNDFQCEDVNNFICEKDRETVLS
690 700 710 720 730
250
pF1KE2 EPPLL
CCDS32 SAL
740
252 residues in 1 query sequences
18921897 residues in 33420 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Oct 23 17:42:35 2018 done: Tue Oct 23 17:42:35 2018
Total Scan time: 1.080 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]