Result of FASTA (ccds) for
pF1KE2641
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2641, 439 aa
1>>>pF1KE2641 439 - 439 aa - 439 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.8103+/-0.000936; mu= 6.9023+/- 0.057
mean_var=134.6467+/-26.215, 0's: 0 Z-trim(109.8): 26 B-trim: 9 in 1/50
Lambda= 0.110529
statistics sampled from 11159 (11178) to 11159 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.701), E-opt: 0.2 (0.343), width: 16
Scan time: 2.940
The best scores are: opt bits E(32554)
CCDS58356.1 NUSAP1 gene_id:51203|Hs108|chr15 ( 439) 2842 464.4 9.7e-131
CCDS45236.1 NUSAP1 gene_id:51203|Hs108|chr15 ( 440) 2830 462.5 3.7e-130
CCDS73708.1 NUSAP1 gene_id:51203|Hs108|chr15 ( 440) 2830 462.5 3.7e-130
CCDS45234.1 NUSAP1 gene_id:51203|Hs108|chr15 ( 441) 2818 460.6 1.4e-129
CCDS58357.1 NUSAP1 gene_id:51203|Hs108|chr15 ( 426) 2112 348.0 1e-95
CCDS58358.1 NUSAP1 gene_id:51203|Hs108|chr15 ( 378) 1799 298.1 1e-80
>>CCDS58356.1 NUSAP1 gene_id:51203|Hs108|chr15 (439 aa)
initn: 2842 init1: 2842 opt: 2842 Z-score: 2460.6 bits: 464.4 E(32554): 9.7e-131
Smith-Waterman score: 2842; 100.0% identity (100.0% similar) in 439 aa overlap (1-439:1-439)
10 20 30 40 50 60
pF1KE2 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQNHSEIKISNPTEFQNHEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQNHSEIKISNPTEFQNHEK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 QESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAIT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 TPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQPINKGGVRTPVPPRGRLSVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQPINKGGVRTPVPPRGRLSVA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 STPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKTPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 STPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKTPA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 RKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDLKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDLKA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 SLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQER
370 380 390 400 410 420
430
pF1KE2 KEKKAKVLGMRRGLILAED
:::::::::::::::::::
CCDS58 KEKKAKVLGMRRGLILAED
430
>>CCDS45236.1 NUSAP1 gene_id:51203|Hs108|chr15 (440 aa)
initn: 2201 init1: 2201 opt: 2830 Z-score: 2450.3 bits: 462.5 E(32554): 3.7e-130
Smith-Waterman score: 2830; 99.8% identity (99.8% similar) in 440 aa overlap (1-439:1-440)
10 20 30 40 50 60
pF1KE2 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS
10 20 30 40 50 60
70 80 90 100 110
pF1KE2 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQ-NHSEIKISNPTEFQNHE
:::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::
CCDS45 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQQNHSEIKISNPTEFQNHE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE2 KQESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KQESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAI
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE2 TTPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQPINKGGVRTPVPPRGRLSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TTPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQPINKGGVRTPVPPRGRLSV
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE2 ASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKTP
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE2 ARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDLK
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE2 ASLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ASLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQE
370 380 390 400 410 420
420 430
pF1KE2 RKEKKAKVLGMRRGLILAED
::::::::::::::::::::
CCDS45 RKEKKAKVLGMRRGLILAED
430 440
>>CCDS73708.1 NUSAP1 gene_id:51203|Hs108|chr15 (440 aa)
initn: 1436 init1: 1436 opt: 2830 Z-score: 2450.3 bits: 462.5 E(32554): 3.7e-130
Smith-Waterman score: 2830; 99.8% identity (99.8% similar) in 440 aa overlap (1-439:1-440)
10 20 30 40 50 60
pF1KE2 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQNHSEIKISNPTEFQNHEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQNHSEIKISNPTEFQNHEK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 QESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 QESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAIT
130 140 150 160 170 180
190 200 210 220 230
pF1KE2 TPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQ-PINKGGVRTPVPPRGRLSV
:::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::
CCDS73 TPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQQPINKGGVRTPVPPRGRLSV
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE2 ASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKTP
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE2 ARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDLK
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE2 ASLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ASLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQE
370 380 390 400 410 420
420 430
pF1KE2 RKEKKAKVLGMRRGLILAED
::::::::::::::::::::
CCDS73 RKEKKAKVLGMRRGLILAED
430 440
>>CCDS45234.1 NUSAP1 gene_id:51203|Hs108|chr15 (441 aa)
initn: 2071 init1: 1436 opt: 2818 Z-score: 2439.9 bits: 460.6 E(32554): 1.4e-129
Smith-Waterman score: 2818; 99.5% identity (99.5% similar) in 441 aa overlap (1-439:1-441)
10 20 30 40 50 60
pF1KE2 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS
10 20 30 40 50 60
70 80 90 100 110
pF1KE2 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQ-NHSEIKISNPTEFQNHE
:::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::
CCDS45 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQQNHSEIKISNPTEFQNHE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE2 KQESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KQESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAI
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE2 TTPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQ-PINKGGVRTPVPPRGRLS
::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::
CCDS45 TTPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQQPINKGGVRTPVPPRGRLS
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE2 VASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKT
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE2 PARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 PARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDL
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE2 KASLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KASLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQ
370 380 390 400 410 420
420 430
pF1KE2 ERKEKKAKVLGMRRGLILAED
:::::::::::::::::::::
CCDS45 ERKEKKAKVLGMRRGLILAED
430 440
>>CCDS58357.1 NUSAP1 gene_id:51203|Hs108|chr15 (426 aa)
initn: 2087 init1: 1436 opt: 2112 Z-score: 1831.7 bits: 348.0 E(32554): 1e-95
Smith-Waterman score: 2700; 96.6% identity (96.6% similar) in 440 aa overlap (1-439:1-426)
10 20 30 40 50 60
pF1KE2 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQNHSEIKISNPTEFQNHEK
:::::::::::::::::::::::::::::::::::::::::::: ::
CCDS58 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQNH--------------EK
70 80 90 100
130 140 150 160 170 180
pF1KE2 QESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAIT
110 120 130 140 150 160
190 200 210 220 230
pF1KE2 TPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQ-PINKGGVRTPVPPRGRLSV
:::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::
CCDS58 TPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQQPINKGGVRTPVPPRGRLSV
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE2 ASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKTP
230 240 250 260 270 280
300 310 320 330 340 350
pF1KE2 ARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDLK
290 300 310 320 330 340
360 370 380 390 400 410
pF1KE2 ASLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ASLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQE
350 360 370 380 390 400
420 430
pF1KE2 RKEKKAKVLGMRRGLILAED
::::::::::::::::::::
CCDS58 RKEKKAKVLGMRRGLILAED
410 420
>>CCDS58358.1 NUSAP1 gene_id:51203|Hs108|chr15 (378 aa)
initn: 2109 init1: 1501 opt: 1799 Z-score: 1562.8 bits: 298.1 E(32554): 1e-80
Smith-Waterman score: 2290; 85.7% identity (85.7% similar) in 440 aa overlap (1-439:1-378)
10 20 30 40 50 60
pF1KE2 MIIPSLEELDSLKYSDLQNLAKSLGLRANLRATKLLKALKGYIKHEARKGNENQDESQTS
::::::::::::::::::::::::::::::: ::::::
CCDS58 MIIPSLEELDSLKYSDLQNLAKSLGLRANLR-----------------------DESQTS
10 20 30
70 80 90 100 110
pF1KE2 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQ-NHSEIKISNPTEFQNHE
:::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::
CCDS58 ASSCDETEIQISNQEEAERQPLGHVTKTRRRCKTVRVDPDSQQNHSEIKISNPTEFQNHE
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE2 KQESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KQESQDLRATAKVPSPPDEHQEAENAVSSGNRDSKVPSEGKKSLYTDESSKPGKNKRTAI
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE2 TTPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQPINKGGVRTPVPPRGRLSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TTPNFKKLHEAHFKEMESIDQYIERKKKHFEEHNSMNELKQPINKGGVRTPVPPRGRLSV
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE2 ASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ASTPISQRRSQGRSCGPASQSTLGLKGSLKRSAISAAKTGVRFSAATKDNEHKRSLTKTP
220 230 240 250 260 270
300 310 320 330 340 350
pF1KE2 ARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAAVITPFKLTTEATQTPVSNKKPVFDLK
::::::::::::::::::::::::::::::::::
CCDS58 ARKSAHVTVSGGTPKGEAVLGTHKLKTITGNSAA--------------------------
280 290 300 310
360 370 380 390 400 410
pF1KE2 ASLSRPLNYEPHKGKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQE
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 -------------GKLKPWGQSKENNYLNQHVNRINFYKKTYKQPHLQTKEEQRKKREQE
320 330 340 350
420 430
pF1KE2 RKEKKAKVLGMRRGLILAED
::::::::::::::::::::
CCDS58 RKEKKAKVLGMRRGLILAED
360 370
439 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 17:39:21 2016 done: Tue Nov 8 17:39:21 2016
Total Scan time: 2.940 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]