Result of FASTA (omim) for
pF1KE2636
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2636, 354 aa
1>>>pF1KE2636 354 - 354 aa - 354 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4419+/-0.00035; mu= 15.4809+/- 0.022
mean_var=71.5367+/-14.392, 0's: 0 Z-trim(113.9): 86 B-trim: 0 in 0/56
Lambda= 0.151639
statistics sampled from 23406 (23503) to 23406 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.655), E-opt: 0.2 (0.276), width: 16
Scan time: 6.400
The best scores are: opt bits E(85289)
NP_001119808 (OMIM: 118661,143200) versican core p ( 655) 2384 531.0 2.9e-150
NP_001157569 (OMIM: 118661,143200) versican core p (2409) 2385 531.5 7.3e-150
NP_001157570 (OMIM: 118661,143200) versican core p (1642) 2378 529.9 1.5e-149
NP_004376 (OMIM: 118661,143200) versican core prot (3396) 2378 530.1 2.8e-149
NP_001126 (OMIM: 155760,165800,608361,612813) aggr (2431) 1208 274.0 2.4e-72
XP_011519616 (OMIM: 155760,165800,608361,612813) P (2492) 1208 274.0 2.4e-72
XP_016877476 (OMIM: 155760,165800,608361,612813) P (2515) 1208 274.0 2.5e-72
NP_037359 (OMIM: 155760,165800,608361,612813) aggr (2530) 1208 274.0 2.5e-72
XP_011519615 (OMIM: 155760,165800,608361,612813) P (2530) 1208 274.0 2.5e-72
XP_016877474 (OMIM: 155760,165800,608361,612813) P (2553) 1208 274.0 2.5e-72
XP_016877475 (OMIM: 155760,165800,608361,612813) P (2553) 1208 274.0 2.5e-72
XP_006720482 (OMIM: 155760,165800,608361,612813) P (2568) 1208 274.0 2.5e-72
NP_004377 (OMIM: 600826) neurocan core protein pre (1321) 1127 256.1 3.1e-67
NP_940819 (OMIM: 600347) brevican core protein iso ( 671) 1092 248.3 3.6e-65
XP_011508168 (OMIM: 600347) PREDICTED: brevican co ( 911) 1092 248.4 4.7e-65
NP_068767 (OMIM: 600347) brevican core protein iso ( 911) 1092 248.4 4.7e-65
XP_016857536 (OMIM: 600347) PREDICTED: brevican co ( 956) 1092 248.4 4.8e-65
XP_016864543 (OMIM: 115435) PREDICTED: hyaluronan ( 353) 780 179.9 7.5e-45
XP_016864542 (OMIM: 115435) PREDICTED: hyaluronan ( 353) 780 179.9 7.5e-45
XP_016864540 (OMIM: 115435) PREDICTED: hyaluronan ( 354) 780 179.9 7.5e-45
XP_016864541 (OMIM: 115435) PREDICTED: hyaluronan ( 354) 780 179.9 7.5e-45
XP_011541470 (OMIM: 115435) PREDICTED: hyaluronan ( 354) 780 179.9 7.5e-45
NP_001875 (OMIM: 115435) hyaluronan and proteoglyc ( 354) 780 179.9 7.5e-45
XP_016861492 (OMIM: 608560) PREDICTED: stabilin-1 (2555) 245 63.4 6.6e-09
XP_016861491 (OMIM: 608560) PREDICTED: stabilin-1 (2565) 245 63.4 6.6e-09
XP_005265031 (OMIM: 608560) PREDICTED: stabilin-1 (2569) 245 63.4 6.6e-09
NP_055951 (OMIM: 608560) stabilin-1 precursor [Hom (2570) 245 63.4 6.6e-09
XP_016861490 (OMIM: 608560) PREDICTED: stabilin-1 (2583) 245 63.4 6.6e-09
XP_016861489 (OMIM: 608560) PREDICTED: stabilin-1 (2589) 245 63.4 6.6e-09
XP_016861488 (OMIM: 608560) PREDICTED: stabilin-1 (2590) 245 63.4 6.6e-09
XP_005265030 (OMIM: 608560) PREDICTED: stabilin-1 (2595) 245 63.4 6.6e-09
XP_016861487 (OMIM: 608560) PREDICTED: stabilin-1 (2615) 245 63.4 6.7e-09
XP_011536844 (OMIM: 608561) PREDICTED: stabilin-2 (1238) 197 52.7 5.2e-06
XP_011536843 (OMIM: 608561) PREDICTED: stabilin-2 (1684) 197 52.7 6.7e-06
XP_011536841 (OMIM: 608561) PREDICTED: stabilin-2 (1994) 197 52.8 7.7e-06
NP_060034 (OMIM: 608561) stabilin-2 precursor [Hom (2551) 197 52.8 9.5e-06
NP_009046 (OMIM: 600410) tumor necrosis factor-ind ( 277) 170 46.4 9.1e-05
NP_001193993 (OMIM: 602621) coxsackievirus and ade ( 200) 143 40.4 0.0042
NP_005805 (OMIM: 602171) cell surface A33 antigen ( 319) 142 40.3 0.0072
>>NP_001119808 (OMIM: 118661,143200) versican core prote (655 aa)
initn: 2382 init1: 2382 opt: 2384 Z-score: 2818.7 bits: 531.0 E(85289): 2.9e-150
Smith-Waterman score: 2384; 99.1% identity (99.4% similar) in 352 aa overlap (1-350:1-352)
10 20 30 40 50 60
pF1KE2 MFINIKSILWMCSTLIVTHALHKVKVGKSPPVRGSLSGKVSLPCHFSTMPTLPPSYNTSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFINIKSILWMCSTLIVTHALHKVKVGKSPPVRGSLSGKVSLPCHFSTMPTLPPSYNTSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 FLRIKWSKIEVDKNGKDLKETTVLVAQNGNIKIGQDYKGRVSVPTHPEAVGDASLTVVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLRIKWSKIEVDKNGKDLKETTVLVAQNGNIKIGQDYKGRVSVPTHPEAVGDASLTVVKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 LASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEAAQKACLDVGAVIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEAAQKACLDVGAVIA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 TPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYGDKMGKAGVRTYGFRSPQETYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYGDKMGKAGVRTYGFRSPQETYD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 VYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAWRNGFDQCDYGWLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAWRNGFDQCDYGWLS
250 260 270 280 290 300
310 320 330 340 350
pF1KE2 DASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFKR--KCLIPF
:::::::::::::::::::::::::::::::::::::::::::::::: .:
NP_001 DASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFKRPDRCKMNPCLNG
310 320 330 340 350 360
NP_001 GTCYPTETSYVCTCVPGYSGDQCELDFDECHSNPCRNGATCVDGFNTFRCLCLPSYVGAL
370 380 390 400 410 420
>>NP_001157569 (OMIM: 118661,143200) versican core prote (2409 aa)
initn: 2565 init1: 2385 opt: 2385 Z-score: 2811.5 bits: 531.5 E(85289): 7.3e-150
Smith-Waterman score: 2385; 99.7% identity (100.0% similar) in 349 aa overlap (1-349:1-349)
10 20 30 40 50 60
pF1KE2 MFINIKSILWMCSTLIVTHALHKVKVGKSPPVRGSLSGKVSLPCHFSTMPTLPPSYNTSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFINIKSILWMCSTLIVTHALHKVKVGKSPPVRGSLSGKVSLPCHFSTMPTLPPSYNTSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 FLRIKWSKIEVDKNGKDLKETTVLVAQNGNIKIGQDYKGRVSVPTHPEAVGDASLTVVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLRIKWSKIEVDKNGKDLKETTVLVAQNGNIKIGQDYKGRVSVPTHPEAVGDASLTVVKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 LASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEAAQKACLDVGAVIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEAAQKACLDVGAVIA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 TPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYGDKMGKAGVRTYGFRSPQETYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYGDKMGKAGVRTYGFRSPQETYD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 VYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAWRNGFDQCDYGWLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAWRNGFDQCDYGWLS
250 260 270 280 290 300
310 320 330 340 350
pF1KE2 DASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFKRKCLIPF
::::::::::::::::::::::::::::::::::::::::::::::::.
NP_001 DASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFKRRMSDLSVIGHPI
310 320 330 340 350 360
NP_001 DSESKEDEPCSEETDPVHDLMAEILPEFPDIIEIDLYHSEENEEEEEECANATDVTTTPS
370 380 390 400 410 420
>>NP_001157570 (OMIM: 118661,143200) versican core prote (1642 aa)
initn: 2558 init1: 2378 opt: 2378 Z-score: 2805.7 bits: 529.9 E(85289): 1.5e-149
Smith-Waterman score: 2378; 99.7% identity (99.7% similar) in 349 aa overlap (1-349:1-349)
10 20 30 40 50 60
pF1KE2 MFINIKSILWMCSTLIVTHALHKVKVGKSPPVRGSLSGKVSLPCHFSTMPTLPPSYNTSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFINIKSILWMCSTLIVTHALHKVKVGKSPPVRGSLSGKVSLPCHFSTMPTLPPSYNTSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 FLRIKWSKIEVDKNGKDLKETTVLVAQNGNIKIGQDYKGRVSVPTHPEAVGDASLTVVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLRIKWSKIEVDKNGKDLKETTVLVAQNGNIKIGQDYKGRVSVPTHPEAVGDASLTVVKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 LASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEAAQKACLDVGAVIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEAAQKACLDVGAVIA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 TPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYGDKMGKAGVRTYGFRSPQETYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYGDKMGKAGVRTYGFRSPQETYD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 VYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAWRNGFDQCDYGWLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAWRNGFDQCDYGWLS
250 260 270 280 290 300
310 320 330 340 350
pF1KE2 DASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFKRKCLIPF
::::::::::::::::::::::::::::::::::::::::::::::: :
NP_001 DASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFKPKEATTIDLSILA
310 320 330 340 350 360
NP_001 ETASPSLSKEPQMVSDRTTPIIPLVDELPVIPTEFPPVGNIVSFEQKATVQPQAITDSLA
370 380 390 400 410 420
>>NP_004376 (OMIM: 118661,143200) versican core protein (3396 aa)
initn: 2558 init1: 2378 opt: 2378 Z-score: 2801.0 bits: 530.1 E(85289): 2.8e-149
Smith-Waterman score: 2378; 99.7% identity (99.7% similar) in 349 aa overlap (1-349:1-349)
10 20 30 40 50 60
pF1KE2 MFINIKSILWMCSTLIVTHALHKVKVGKSPPVRGSLSGKVSLPCHFSTMPTLPPSYNTSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MFINIKSILWMCSTLIVTHALHKVKVGKSPPVRGSLSGKVSLPCHFSTMPTLPPSYNTSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 FLRIKWSKIEVDKNGKDLKETTVLVAQNGNIKIGQDYKGRVSVPTHPEAVGDASLTVVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 FLRIKWSKIEVDKNGKDLKETTVLVAQNGNIKIGQDYKGRVSVPTHPEAVGDASLTVVKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 LASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEAAQKACLDVGAVIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEAAQKACLDVGAVIA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 TPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYGDKMGKAGVRTYGFRSPQETYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 TPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYGDKMGKAGVRTYGFRSPQETYD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 VYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAWRNGFDQCDYGWLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 VYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAWRNGFDQCDYGWLS
250 260 270 280 290 300
310 320 330 340 350
pF1KE2 DASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFKRKCLIPF
::::::::::::::::::::::::::::::::::::::::::::::: :
NP_004 DASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFKPKEATTIDLSILA
310 320 330 340 350 360
NP_004 ETASPSLSKEPQMVSDRTTPIIPLVDELPVIPTEFPPVGNIVSFEQKATVQPQAITDSLA
370 380 390 400 410 420
>>NP_001126 (OMIM: 155760,165800,608361,612813) aggrecan (2431 aa)
initn: 2211 init1: 1140 opt: 1208 Z-score: 1419.8 bits: 274.0 E(85289): 2.4e-72
Smith-Waterman score: 1208; 49.9% identity (77.5% similar) in 355 aa overlap (5-346:1-349)
10 20 30 40
pF1KE2 MFINIKSILWMCSTL-IVTHAL------H----KVKVGKSPPVRGSLSGKVSLPCHF-ST
. ..::. :: ..: :. : .:.. . :.: :. ....::.: .
NP_001 MTTLLWVFVTLRVITAAVTVETSDHDNSLSVSIPQPSPLRVLLGTSLTIPCYFIDP
10 20 30 40 50
50 60 70 80 90 100
pF1KE2 MPTLPPSYNTSEFL-RIKWSKIEVDKNGKDLKETTVLVAQNGNIKIGQDYKGRVSVPTHP
: . . .:. . :::::.. . ::...::: .: ..... :. .::.:..:
NP_001 MHPVTTAPSTAPLAPRIKWSRVSKE------KEVVLLVATEGRVRVNSAYQDKVSLPNYP
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE2 EAVGDASLTVVKLLASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEA
.::.: : .: ..:.:.:::.::.::::.. :. ..: :.:::::: ..::::.:.
NP_001 AIPSDATLEVQSLRSNDSGVYRCEVMHGIEDSEATLEVVVKGIVFHYRAISTRYTLDFDR
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE2 AQKACLDVGAVIATPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYGDKMGKAGV
::.:::. .:.::::::: :::::::.::::::::::::::::..:: :::::: ::
NP_001 AQRACLQNSAIIATPEQLQAAYEDGFHQCDAGWLADQTVRYPIHTPREGCYGDKDEFPGV
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE2 RTYGFRSPQETYDVYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAW
::::.:. .:::::::......:.::. : : ::::.:::.::. :::::.:.: ::
NP_001 RTYGIRDTNETYDVYCFAEEMEGEVFYATSPEKFTFQEAANECRRLGARLATTGQLYLAW
240 250 260 270 280 290
290 300 310 320 330 340
pF1KE2 RNGFDQCDYGWLSDASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFK
. :.:.:. :::.: :::.:.. :: .:::.::::::.: ::::.: :.::.:: :.
NP_001 QAGMDMCSAGWLADRSVRYPISKARPNCGGNLLGVRTVYVHANQTGYPDPSSRYDAICYT
300 310 320 330 340 350
350
pF1KE2 RKCLIPF
NP_001 GEDFVDIPENFFGVGGEEDITVQTVTWPDMELPLPRNITEGEARGSVILTVKPIFEVSPS
360 370 380 390 400 410
>--
initn: 1077 init1: 858 opt: 863 Z-score: 1011.9 bits: 198.5 E(85289): 1.3e-49
Smith-Waterman score: 863; 59.0% identity (78.0% similar) in 205 aa overlap (149-353:477-681)
120 130 140 150 160 170
pF1KE2 KLLASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEAAQKACLDVGAV
::::::: . .::.:.:: ::.::: .:::
NP_001 TPGLGPATAFTSEDLVVQVTAVPGQPHLPGGVVFHYRPGPTRYSLTFEEAQQACLRTGAV
450 460 470 480 490 500
180 190 200 210 220 230
pF1KE2 IATPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYGDKMGKAGVRTYGFRSPQET
::.:::: :::: :.:::::::: :::::::: .::. : ::: .. :::::: : ::
NP_001 IASPEQLQAAYEAGYEQCDAGWLRDQTVRYPIVSPRTPCVGDKDSSPGVRTYGVRPSTET
510 520 530 540 550 560
240 250 260 270 280 290
pF1KE2 YDVYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAWRNGFDQCDYGW
:::::.::.:.:.:: : .:::.:: . ::...: :::.:.: ::: :.:.: ::
NP_001 YDVYCFVDRLEGEVFFATRLEQFTFQEALEFCESHNATLATTGQLYAAWSRGLDKCYAGW
570 580 590 600 610 620
300 310 320 330 340 350
pF1KE2 LSDASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFKRKCLIPF
:.:.:.:.:... : ::: ::::.: . ::::.: : :: :.::. .:
NP_001 LADGSLRYPIVTPRPACGGDKPGVRTVYLYPNQTGLPDPLSRHHAFCFRGISAVPSPGEE
630 640 650 660 670 680
NP_001 EGGTPTSPSGVEEWIVTQVVPGVAAVPVEEETTAVPSGETTAILEFTTEPENQTEWEPAY
690 700 710 720 730 740
>>XP_011519616 (OMIM: 155760,165800,608361,612813) PREDI (2492 aa)
initn: 2211 init1: 1140 opt: 1208 Z-score: 1419.7 bits: 274.0 E(85289): 2.4e-72
Smith-Waterman score: 1208; 49.9% identity (77.5% similar) in 355 aa overlap (5-346:1-349)
10 20 30 40
pF1KE2 MFINIKSILWMCSTL-IVTHAL------H----KVKVGKSPPVRGSLSGKVSLPCHF-ST
. ..::. :: ..: :. : .:.. . :.: :. ....::.: .
XP_011 MTTLLWVFVTLRVITAAVTVETSDHDNSLSVSIPQPSPLRVLLGTSLTIPCYFIDP
10 20 30 40 50
50 60 70 80 90 100
pF1KE2 MPTLPPSYNTSEFL-RIKWSKIEVDKNGKDLKETTVLVAQNGNIKIGQDYKGRVSVPTHP
: . . .:. . :::::.. . ::...::: .: ..... :. .::.:..:
XP_011 MHPVTTAPSTAPLAPRIKWSRVSKE------KEVVLLVATEGRVRVNSAYQDKVSLPNYP
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE2 EAVGDASLTVVKLLASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEA
.::.: : .: ..:.:.:::.::.::::.. :. ..: :.:::::: ..::::.:.
XP_011 AIPSDATLEVQSLRSNDSGVYRCEVMHGIEDSEATLEVVVKGIVFHYRAISTRYTLDFDR
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE2 AQKACLDVGAVIATPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYGDKMGKAGV
::.:::. .:.::::::: :::::::.::::::::::::::::..:: :::::: ::
XP_011 AQRACLQNSAIIATPEQLQAAYEDGFHQCDAGWLADQTVRYPIHTPREGCYGDKDEFPGV
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE2 RTYGFRSPQETYDVYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAW
::::.:. .:::::::......:.::. : : ::::.:::.::. :::::.:.: ::
XP_011 RTYGIRDTNETYDVYCFAEEMEGEVFYATSPEKFTFQEAANECRRLGARLATTGQLYLAW
240 250 260 270 280 290
290 300 310 320 330 340
pF1KE2 RNGFDQCDYGWLSDASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFK
. :.:.:. :::.: :::.:.. :: .:::.::::::.: ::::.: :.::.:: :.
XP_011 QAGMDMCSAGWLADRSVRYPISKARPNCGGNLLGVRTVYVHANQTGYPDPSSRYDAICYT
300 310 320 330 340 350
350
pF1KE2 RKCLIPF
XP_011 GEDFVDIPENFFGVGGEEDITVQTVTWPDMELPLPRNITEGEARGSVILTVKPIFEVSPS
360 370 380 390 400 410
>--
initn: 1077 init1: 858 opt: 863 Z-score: 1011.8 bits: 198.5 E(85289): 1.3e-49
Smith-Waterman score: 863; 59.0% identity (78.0% similar) in 205 aa overlap (149-353:477-681)
120 130 140 150 160 170
pF1KE2 KLLASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEAAQKACLDVGAV
::::::: . .::.:.:: ::.::: .:::
XP_011 TPGLGPATAFTSEDLVVQVTAVPGQPHLPGGVVFHYRPGPTRYSLTFEEAQQACLRTGAV
450 460 470 480 490 500
180 190 200 210 220 230
pF1KE2 IATPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYGDKMGKAGVRTYGFRSPQET
::.:::: :::: :.:::::::: :::::::: .::. : ::: .. :::::: : ::
XP_011 IASPEQLQAAYEAGYEQCDAGWLRDQTVRYPIVSPRTPCVGDKDSSPGVRTYGVRPSTET
510 520 530 540 550 560
240 250 260 270 280 290
pF1KE2 YDVYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAWRNGFDQCDYGW
:::::.::.:.:.:: : .:::.:: . ::...: :::.:.: ::: :.:.: ::
XP_011 YDVYCFVDRLEGEVFFATRLEQFTFQEALEFCESHNATLATTGQLYAAWSRGLDKCYAGW
570 580 590 600 610 620
300 310 320 330 340 350
pF1KE2 LSDASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFKRKCLIPF
:.:.:.:.:... : ::: ::::.: . ::::.: : :: :.::. .:
XP_011 LADGSLRYPIVTPRPACGGDKPGVRTVYLYPNQTGLPDPLSRHHAFCFRGISAVPSPGEE
630 640 650 660 670 680
XP_011 EGGTPTSPSGVEEWIVTQVVPGVAAVPVEEETTAVPSGETTAILEFTTEPENQTEWEPAY
690 700 710 720 730 740
>>XP_016877476 (OMIM: 155760,165800,608361,612813) PREDI (2515 aa)
initn: 2211 init1: 1140 opt: 1208 Z-score: 1419.6 bits: 274.0 E(85289): 2.5e-72
Smith-Waterman score: 1208; 49.9% identity (77.5% similar) in 355 aa overlap (5-346:1-349)
10 20 30 40
pF1KE2 MFINIKSILWMCSTL-IVTHAL------H----KVKVGKSPPVRGSLSGKVSLPCHF-ST
. ..::. :: ..: :. : .:.. . :.: :. ....::.: .
XP_016 MTTLLWVFVTLRVITAAVTVETSDHDNSLSVSIPQPSPLRVLLGTSLTIPCYFIDP
10 20 30 40 50
50 60 70 80 90 100
pF1KE2 MPTLPPSYNTSEFL-RIKWSKIEVDKNGKDLKETTVLVAQNGNIKIGQDYKGRVSVPTHP
: . . .:. . :::::.. . ::...::: .: ..... :. .::.:..:
XP_016 MHPVTTAPSTAPLAPRIKWSRVSKE------KEVVLLVATEGRVRVNSAYQDKVSLPNYP
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE2 EAVGDASLTVVKLLASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEA
.::.: : .: ..:.:.:::.::.::::.. :. ..: :.:::::: ..::::.:.
XP_016 AIPSDATLEVQSLRSNDSGVYRCEVMHGIEDSEATLEVVVKGIVFHYRAISTRYTLDFDR
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE2 AQKACLDVGAVIATPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYGDKMGKAGV
::.:::. .:.::::::: :::::::.::::::::::::::::..:: :::::: ::
XP_016 AQRACLQNSAIIATPEQLQAAYEDGFHQCDAGWLADQTVRYPIHTPREGCYGDKDEFPGV
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE2 RTYGFRSPQETYDVYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAW
::::.:. .:::::::......:.::. : : ::::.:::.::. :::::.:.: ::
XP_016 RTYGIRDTNETYDVYCFAEEMEGEVFYATSPEKFTFQEAANECRRLGARLATTGQLYLAW
240 250 260 270 280 290
290 300 310 320 330 340
pF1KE2 RNGFDQCDYGWLSDASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFK
. :.:.:. :::.: :::.:.. :: .:::.::::::.: ::::.: :.::.:: :.
XP_016 QAGMDMCSAGWLADRSVRYPISKARPNCGGNLLGVRTVYVHANQTGYPDPSSRYDAICYT
300 310 320 330 340 350
350
pF1KE2 RKCLIPF
XP_016 GEDFVDIPENFFGVGGEEDITVQTVTWPDMELPLPRNITEGEARGSVILTVKPIFEVSPS
360 370 380 390 400 410
>--
initn: 1077 init1: 858 opt: 863 Z-score: 1011.7 bits: 198.5 E(85289): 1.3e-49
Smith-Waterman score: 863; 59.0% identity (78.0% similar) in 205 aa overlap (149-353:477-681)
120 130 140 150 160 170
pF1KE2 KLLASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEAAQKACLDVGAV
::::::: . .::.:.:: ::.::: .:::
XP_016 TPGLGPATAFTSEDLVVQVTAVPGQPHLPGGVVFHYRPGPTRYSLTFEEAQQACLRTGAV
450 460 470 480 490 500
180 190 200 210 220 230
pF1KE2 IATPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYGDKMGKAGVRTYGFRSPQET
::.:::: :::: :.:::::::: :::::::: .::. : ::: .. :::::: : ::
XP_016 IASPEQLQAAYEAGYEQCDAGWLRDQTVRYPIVSPRTPCVGDKDSSPGVRTYGVRPSTET
510 520 530 540 550 560
240 250 260 270 280 290
pF1KE2 YDVYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAWRNGFDQCDYGW
:::::.::.:.:.:: : .:::.:: . ::...: :::.:.: ::: :.:.: ::
XP_016 YDVYCFVDRLEGEVFFATRLEQFTFQEALEFCESHNATLATTGQLYAAWSRGLDKCYAGW
570 580 590 600 610 620
300 310 320 330 340 350
pF1KE2 LSDASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFKRKCLIPF
:.:.:.:.:... : ::: ::::.: . ::::.: : :: :.::. .:
XP_016 LADGSLRYPIVTPRPACGGDKPGVRTVYLYPNQTGLPDPLSRHHAFCFRGISAVPSPGEE
630 640 650 660 670 680
XP_016 EGGTPTSPSGVEEWIVTQVVPGVAAVPVEEETTAVPSGETTAILEFTTEPENQTEWEPAY
690 700 710 720 730 740
>>NP_037359 (OMIM: 155760,165800,608361,612813) aggrecan (2530 aa)
initn: 2211 init1: 1140 opt: 1208 Z-score: 1419.6 bits: 274.0 E(85289): 2.5e-72
Smith-Waterman score: 1208; 49.9% identity (77.5% similar) in 355 aa overlap (5-346:1-349)
10 20 30 40
pF1KE2 MFINIKSILWMCSTL-IVTHAL------H----KVKVGKSPPVRGSLSGKVSLPCHF-ST
. ..::. :: ..: :. : .:.. . :.: :. ....::.: .
NP_037 MTTLLWVFVTLRVITAAVTVETSDHDNSLSVSIPQPSPLRVLLGTSLTIPCYFIDP
10 20 30 40 50
50 60 70 80 90 100
pF1KE2 MPTLPPSYNTSEFL-RIKWSKIEVDKNGKDLKETTVLVAQNGNIKIGQDYKGRVSVPTHP
: . . .:. . :::::.. . ::...::: .: ..... :. .::.:..:
NP_037 MHPVTTAPSTAPLAPRIKWSRVSKE------KEVVLLVATEGRVRVNSAYQDKVSLPNYP
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE2 EAVGDASLTVVKLLASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEA
.::.: : .: ..:.:.:::.::.::::.. :. ..: :.:::::: ..::::.:.
NP_037 AIPSDATLEVQSLRSNDSGVYRCEVMHGIEDSEATLEVVVKGIVFHYRAISTRYTLDFDR
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE2 AQKACLDVGAVIATPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYGDKMGKAGV
::.:::. .:.::::::: :::::::.::::::::::::::::..:: :::::: ::
NP_037 AQRACLQNSAIIATPEQLQAAYEDGFHQCDAGWLADQTVRYPIHTPREGCYGDKDEFPGV
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE2 RTYGFRSPQETYDVYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAW
::::.:. .:::::::......:.::. : : ::::.:::.::. :::::.:.: ::
NP_037 RTYGIRDTNETYDVYCFAEEMEGEVFYATSPEKFTFQEAANECRRLGARLATTGQLYLAW
240 250 260 270 280 290
290 300 310 320 330 340
pF1KE2 RNGFDQCDYGWLSDASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFK
. :.:.:. :::.: :::.:.. :: .:::.::::::.: ::::.: :.::.:: :.
NP_037 QAGMDMCSAGWLADRSVRYPISKARPNCGGNLLGVRTVYVHANQTGYPDPSSRYDAICYT
300 310 320 330 340 350
350
pF1KE2 RKCLIPF
NP_037 GEDFVDIPENFFGVGGEEDITVQTVTWPDMELPLPRNITEGEARGSVILTVKPIFEVSPS
360 370 380 390 400 410
>--
initn: 1077 init1: 858 opt: 863 Z-score: 1011.7 bits: 198.5 E(85289): 1.3e-49
Smith-Waterman score: 863; 59.0% identity (78.0% similar) in 205 aa overlap (149-353:477-681)
120 130 140 150 160 170
pF1KE2 KLLASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEAAQKACLDVGAV
::::::: . .::.:.:: ::.::: .:::
NP_037 TPGLGPATAFTSEDLVVQVTAVPGQPHLPGGVVFHYRPGPTRYSLTFEEAQQACLRTGAV
450 460 470 480 490 500
180 190 200 210 220 230
pF1KE2 IATPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYGDKMGKAGVRTYGFRSPQET
::.:::: :::: :.:::::::: :::::::: .::. : ::: .. :::::: : ::
NP_037 IASPEQLQAAYEAGYEQCDAGWLRDQTVRYPIVSPRTPCVGDKDSSPGVRTYGVRPSTET
510 520 530 540 550 560
240 250 260 270 280 290
pF1KE2 YDVYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAWRNGFDQCDYGW
:::::.::.:.:.:: : .:::.:: . ::...: :::.:.: ::: :.:.: ::
NP_037 YDVYCFVDRLEGEVFFATRLEQFTFQEALEFCESHNATLATTGQLYAAWSRGLDKCYAGW
570 580 590 600 610 620
300 310 320 330 340 350
pF1KE2 LSDASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFKRKCLIPF
:.:.:.:.:... : ::: ::::.: . ::::.: : :: :.::. .:
NP_037 LADGSLRYPIVTPRPACGGDKPGVRTVYLYPNQTGLPDPLSRHHAFCFRGISAVPSPGEE
630 640 650 660 670 680
NP_037 EGGTPTSPSGVEEWIVTQVVPGVAAVPVEEETTAVPSGETTAILEFTTEPENQTEWEPAY
690 700 710 720 730 740
>>XP_011519615 (OMIM: 155760,165800,608361,612813) PREDI (2530 aa)
initn: 2211 init1: 1140 opt: 1208 Z-score: 1419.6 bits: 274.0 E(85289): 2.5e-72
Smith-Waterman score: 1208; 49.9% identity (77.5% similar) in 355 aa overlap (5-346:1-349)
10 20 30 40
pF1KE2 MFINIKSILWMCSTL-IVTHAL------H----KVKVGKSPPVRGSLSGKVSLPCHF-ST
. ..::. :: ..: :. : .:.. . :.: :. ....::.: .
XP_011 MTTLLWVFVTLRVITAAVTVETSDHDNSLSVSIPQPSPLRVLLGTSLTIPCYFIDP
10 20 30 40 50
50 60 70 80 90 100
pF1KE2 MPTLPPSYNTSEFL-RIKWSKIEVDKNGKDLKETTVLVAQNGNIKIGQDYKGRVSVPTHP
: . . .:. . :::::.. . ::...::: .: ..... :. .::.:..:
XP_011 MHPVTTAPSTAPLAPRIKWSRVSKE------KEVVLLVATEGRVRVNSAYQDKVSLPNYP
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE2 EAVGDASLTVVKLLASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEA
.::.: : .: ..:.:.:::.::.::::.. :. ..: :.:::::: ..::::.:.
XP_011 AIPSDATLEVQSLRSNDSGVYRCEVMHGIEDSEATLEVVVKGIVFHYRAISTRYTLDFDR
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE2 AQKACLDVGAVIATPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYGDKMGKAGV
::.:::. .:.::::::: :::::::.::::::::::::::::..:: :::::: ::
XP_011 AQRACLQNSAIIATPEQLQAAYEDGFHQCDAGWLADQTVRYPIHTPREGCYGDKDEFPGV
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE2 RTYGFRSPQETYDVYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAW
::::.:. .:::::::......:.::. : : ::::.:::.::. :::::.:.: ::
XP_011 RTYGIRDTNETYDVYCFAEEMEGEVFYATSPEKFTFQEAANECRRLGARLATTGQLYLAW
240 250 260 270 280 290
290 300 310 320 330 340
pF1KE2 RNGFDQCDYGWLSDASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFK
. :.:.:. :::.: :::.:.. :: .:::.::::::.: ::::.: :.::.:: :.
XP_011 QAGMDMCSAGWLADRSVRYPISKARPNCGGNLLGVRTVYVHANQTGYPDPSSRYDAICYT
300 310 320 330 340 350
350
pF1KE2 RKCLIPF
XP_011 GEDFVDIPENFFGVGGEEDITVQTVTWPDMELPLPRNITEGEARGSVILTVKPIFEVSPS
360 370 380 390 400 410
>--
initn: 1077 init1: 858 opt: 863 Z-score: 1011.7 bits: 198.5 E(85289): 1.3e-49
Smith-Waterman score: 863; 59.0% identity (78.0% similar) in 205 aa overlap (149-353:477-681)
120 130 140 150 160 170
pF1KE2 KLLASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEAAQKACLDVGAV
::::::: . .::.:.:: ::.::: .:::
XP_011 TPGLGPATAFTSEDLVVQVTAVPGQPHLPGGVVFHYRPGPTRYSLTFEEAQQACLRTGAV
450 460 470 480 490 500
180 190 200 210 220 230
pF1KE2 IATPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYGDKMGKAGVRTYGFRSPQET
::.:::: :::: :.:::::::: :::::::: .::. : ::: .. :::::: : ::
XP_011 IASPEQLQAAYEAGYEQCDAGWLRDQTVRYPIVSPRTPCVGDKDSSPGVRTYGVRPSTET
510 520 530 540 550 560
240 250 260 270 280 290
pF1KE2 YDVYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAWRNGFDQCDYGW
:::::.::.:.:.:: : .:::.:: . ::...: :::.:.: ::: :.:.: ::
XP_011 YDVYCFVDRLEGEVFFATRLEQFTFQEALEFCESHNATLATTGQLYAAWSRGLDKCYAGW
570 580 590 600 610 620
300 310 320 330 340 350
pF1KE2 LSDASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFKRKCLIPF
:.:.:.:.:... : ::: ::::.: . ::::.: : :: :.::. .:
XP_011 LADGSLRYPIVTPRPACGGDKPGVRTVYLYPNQTGLPDPLSRHHAFCFRGISAVPSPGEE
630 640 650 660 670 680
XP_011 EGGTPTSPSGVEEWIVTQVVPGVAAVPVEEETTAVPSGETTAILEFTTEPENQTEWEPAY
690 700 710 720 730 740
>>XP_016877474 (OMIM: 155760,165800,608361,612813) PREDI (2553 aa)
initn: 2211 init1: 1140 opt: 1208 Z-score: 1419.5 bits: 274.0 E(85289): 2.5e-72
Smith-Waterman score: 1208; 49.9% identity (77.5% similar) in 355 aa overlap (5-346:1-349)
10 20 30 40
pF1KE2 MFINIKSILWMCSTL-IVTHAL------H----KVKVGKSPPVRGSLSGKVSLPCHF-ST
. ..::. :: ..: :. : .:.. . :.: :. ....::.: .
XP_016 MTTLLWVFVTLRVITAAVTVETSDHDNSLSVSIPQPSPLRVLLGTSLTIPCYFIDP
10 20 30 40 50
50 60 70 80 90 100
pF1KE2 MPTLPPSYNTSEFL-RIKWSKIEVDKNGKDLKETTVLVAQNGNIKIGQDYKGRVSVPTHP
: . . .:. . :::::.. . ::...::: .: ..... :. .::.:..:
XP_016 MHPVTTAPSTAPLAPRIKWSRVSKE------KEVVLLVATEGRVRVNSAYQDKVSLPNYP
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE2 EAVGDASLTVVKLLASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEA
.::.: : .: ..:.:.:::.::.::::.. :. ..: :.:::::: ..::::.:.
XP_016 AIPSDATLEVQSLRSNDSGVYRCEVMHGIEDSEATLEVVVKGIVFHYRAISTRYTLDFDR
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE2 AQKACLDVGAVIATPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYGDKMGKAGV
::.:::. .:.::::::: :::::::.::::::::::::::::..:: :::::: ::
XP_016 AQRACLQNSAIIATPEQLQAAYEDGFHQCDAGWLADQTVRYPIHTPREGCYGDKDEFPGV
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE2 RTYGFRSPQETYDVYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAW
::::.:. .:::::::......:.::. : : ::::.:::.::. :::::.:.: ::
XP_016 RTYGIRDTNETYDVYCFAEEMEGEVFYATSPEKFTFQEAANECRRLGARLATTGQLYLAW
240 250 260 270 280 290
290 300 310 320 330 340
pF1KE2 RNGFDQCDYGWLSDASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFK
. :.:.:. :::.: :::.:.. :: .:::.::::::.: ::::.: :.::.:: :.
XP_016 QAGMDMCSAGWLADRSVRYPISKARPNCGGNLLGVRTVYVHANQTGYPDPSSRYDAICYT
300 310 320 330 340 350
350
pF1KE2 RKCLIPF
XP_016 GEDFVDIPENFFGVGGEEDITVQTVTWPDMELPLPRNITEGEARGSVILTVKPIFEVSPS
360 370 380 390 400 410
>--
initn: 1077 init1: 858 opt: 863 Z-score: 1011.6 bits: 198.5 E(85289): 1.3e-49
Smith-Waterman score: 863; 59.0% identity (78.0% similar) in 205 aa overlap (149-353:477-681)
120 130 140 150 160 170
pF1KE2 KLLASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEAAQKACLDVGAV
::::::: . .::.:.:: ::.::: .:::
XP_016 TPGLGPATAFTSEDLVVQVTAVPGQPHLPGGVVFHYRPGPTRYSLTFEEAQQACLRTGAV
450 460 470 480 490 500
180 190 200 210 220 230
pF1KE2 IATPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYGDKMGKAGVRTYGFRSPQET
::.:::: :::: :.:::::::: :::::::: .::. : ::: .. :::::: : ::
XP_016 IASPEQLQAAYEAGYEQCDAGWLRDQTVRYPIVSPRTPCVGDKDSSPGVRTYGVRPSTET
510 520 530 540 550 560
240 250 260 270 280 290
pF1KE2 YDVYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAWRNGFDQCDYGW
:::::.::.:.:.:: : .:::.:: . ::...: :::.:.: ::: :.:.: ::
XP_016 YDVYCFVDRLEGEVFFATRLEQFTFQEALEFCESHNATLATTGQLYAAWSRGLDKCYAGW
570 580 590 600 610 620
300 310 320 330 340 350
pF1KE2 LSDASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFKRKCLIPF
:.:.:.:.:... : ::: ::::.: . ::::.: : :: :.::. .:
XP_016 LADGSLRYPIVTPRPACGGDKPGVRTVYLYPNQTGLPDPLSRHHAFCFRGISAVPSPGEE
630 640 650 660 670 680
XP_016 EGGTPTSPSGVEEWIVTQVVPGVAAVPVEEETTAVPSGETTAILEFTTEPENQTEWEPAY
690 700 710 720 730 740
354 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 17:35:31 2016 done: Tue Nov 8 17:35:32 2016
Total Scan time: 6.400 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]