Result of FASTA (ccds) for
pF1KE2576
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2576, 169 aa
1>>>pF1KE2576 169 - 169 aa - 169 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0251+/-0.000851; mu= 13.9680+/- 0.051
mean_var=76.5092+/-15.445, 0's: 0 Z-trim(107.5): 63 B-trim: 5 in 1/50
Lambda= 0.146628
statistics sampled from 9579 (9642) to 9579 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.693), E-opt: 0.2 (0.296), width: 16
Scan time: 1.870
The best scores are: opt bits E(32554)
CCDS10677.1 MYLPF gene_id:29895|Hs108|chr16 ( 169) 1114 244.6 2.1e-65
CCDS31901.1 MYL2 gene_id:4633|Hs108|chr12 ( 166) 826 183.7 4.6e-47
CCDS34713.1 MYL10 gene_id:93408|Hs108|chr7 ( 226) 690 155.1 2.6e-38
CCDS5478.1 MYL7 gene_id:58498|Hs108|chr7 ( 175) 681 153.1 8.1e-38
CCDS43197.1 MYL5 gene_id:4636|Hs108|chr4 ( 173) 672 151.1 3e-37
CCDS11830.1 MYL12A gene_id:10627|Hs108|chr18 ( 171) 605 137.0 5.5e-33
CCDS77145.1 MYL12A gene_id:10627|Hs108|chr18 ( 177) 605 137.0 5.7e-33
CCDS11831.1 MYL12B gene_id:103910|Hs108|chr18 ( 172) 600 135.9 1.2e-32
CCDS13276.1 MYL9 gene_id:10398|Hs108|chr20 ( 172) 590 133.8 5e-32
CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 ( 149) 268 65.6 1.4e-11
CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 ( 149) 268 65.6 1.4e-11
CCDS33061.1 CALM3 gene_id:808|Hs108|chr19 ( 149) 268 65.6 1.4e-11
CCDS7069.1 CALML3 gene_id:810|Hs108|chr10 ( 149) 267 65.4 1.7e-11
>>CCDS10677.1 MYLPF gene_id:29895|Hs108|chr16 (169 aa)
initn: 1114 init1: 1114 opt: 1114 Z-score: 1287.6 bits: 244.6 E(32554): 2.1e-65
Smith-Waterman score: 1114; 99.4% identity (100.0% similar) in 169 aa overlap (1-169:1-169)
10 20 30 40 50 60
pF1KE2 MAPKRAKRRTVEGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MAPKRAKRRTVEGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 NVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFL
70 80 90 100 110 120
130 140 150 160
pF1KE2 EELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAEDQE
:::::::::::::::::::::::::::::::::::::::::::::.:::
CCDS10 EELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE
130 140 150 160
>>CCDS31901.1 MYL2 gene_id:4633|Hs108|chr12 (166 aa)
initn: 828 init1: 774 opt: 826 Z-score: 958.5 bits: 183.7 E(32554): 4.6e-47
Smith-Waterman score: 826; 71.3% identity (92.8% similar) in 167 aa overlap (1-167:1-166)
10 20 30 40 50 60
pF1KE2 MAPKRAKRRTVEGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRL
::::.::.:. :..:.:::::.::::::::::::..::::::.:::.::::::::.::.
CCDS31 MAPKKAKKRA-GGANSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRV
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 NVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFL
::::::.: :.::: ::::::::::::::::::::::..: .::::.::::::..: ..
CCDS31 NVKNEEIDEMIKEAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYV
60 70 80 90 100 110
130 140 150 160
pF1KE2 EELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAEDQE
.:.:::: .:::.::. .:.::::::: ::.::::. ..::::. .:
CCDS31 REMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHGEEKD
120 130 140 150 160
>>CCDS34713.1 MYL10 gene_id:93408|Hs108|chr7 (226 aa)
initn: 840 init1: 688 opt: 690 Z-score: 801.2 bits: 155.1 E(32554): 2.6e-38
Smith-Waterman score: 746; 59.8% identity (74.9% similar) in 199 aa overlap (3-167:28-226)
10 20 30
pF1KE2 MAPKRAKRRTVEGGSSSVFSMFDQTQIQEFKE---
:.::..:. .::.:::::::.:::::::
CCDS34 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
10 20 30 40 50 60
40 50 60
pF1KE2 -------------------------------AFTVIDQNRDGIIDKEDLRDTFAAMGRLN
:::..::::::.::::::::::::.::.:
CCDS34 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
70 80 90 100 110 120
70 80 90 100 110 120
pF1KE2 VKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFLE
::::::.::.::: ::::::::::::::::::.:::..: ::::.: :::: .: ..
CCDS34 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
130 140 150 160 170 180
130 140 150 160
pF1KE2 ELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAEDQE
: : :: ::::.::.:.:.::::::: ::.::.:.:::::::. .:
CCDS34 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHGEEKD
190 200 210 220
>>CCDS5478.1 MYL7 gene_id:58498|Hs108|chr7 (175 aa)
initn: 707 init1: 674 opt: 681 Z-score: 792.4 bits: 153.1 E(32554): 8.1e-38
Smith-Waterman score: 681; 57.6% identity (86.7% similar) in 165 aa overlap (4-168:11-175)
10 20 30 40 50
pF1KE2 MAPKRAKRRTVEGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDT
: : . .. :::.:::::.:.:::::::::. ::::::::: : :::.:
CCDS54 MASRKAGTRGKVAATKQAQRGSSNVFSMFEQAQIQEFKEAFSCIDQNRDGIICKADLRET
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 FAAMGRLNVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKG
.. .:...: .::::::..:..::::::::::.:::::.:.:::..: .::...:: :::
CCDS54 YSQLGKVSVPEEELDAMLQEGKGPINFTVFLTLFGEKLNGTDPEEAILSAFRMFDPSGKG
70 80 90 100 110 120
120 130 140 150 160
pF1KE2 TIKKKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAEDQE
...: ...:: :: :.:: :...:.: : :..::.:::..::.::::: ...
CCDS54 VVNKDEFKQLLLTQADKFSPAEVEQMFALTPMDLAGNIDYKSLCYIITHGDEKEE
130 140 150 160 170
>>CCDS43197.1 MYL5 gene_id:4636|Hs108|chr4 (173 aa)
initn: 713 init1: 659 opt: 672 Z-score: 782.2 bits: 151.1 E(32554): 3e-37
Smith-Waterman score: 672; 57.1% identity (84.6% similar) in 175 aa overlap (1-168:1-173)
10 20 30 40 50
pF1KE2 MAPKRAKRRTVEGG-------SSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDT
:: ...:.. ::: ::.::: :.::::::::::::..::::::.::::::.::
CCDS43 MASRKTKKK--EGGALRAQRASSNVFSNFEQTQIQEFKEAFTLMDQNRDGFIDKEDLKDT
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 FAAMGRLNVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKG
.:..:. :::..:::::.::::::::::.::..:::::.:.: :..: .:::.:::.:::
CCDS43 YASLGKTNVKDDELDAMLKEASGPINFTMFLNLFGEKLSGTDAEETILNAFKMLDPDGKG
60 70 80 90 100 110
120 130 140 150 160
pF1KE2 TIKKKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAEDQE
:.:.....:: .: :... ::. .:. ::.::.::: . ::::::. ...
CCDS43 KINKEYIKRLLMSQADKMTAEEVDQMFQFASIDVAGNLDYKALSYVITHGEEKEE
120 130 140 150 160 170
>>CCDS11830.1 MYL12A gene_id:10627|Hs108|chr18 (171 aa)
initn: 576 init1: 369 opt: 605 Z-score: 705.6 bits: 137.0 E(32554): 5.5e-33
Smith-Waterman score: 605; 55.2% identity (80.8% similar) in 172 aa overlap (1-169:1-170)
10 20 30 40 50
pF1KE2 MAPKRAKRRTV---EGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAM
:. ::.: .: . ..:.::.::::.:::::::::..:::::::.::::::.: .:..
CCDS11 MSSKRTKTKTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 GRLNVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKK
:. : .: :::::.:: ::::::.:::::::::.:.:::::: .:: .: :. :::..
CCDS11 GK-NPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQE
70 80 90 100 110
120 130 140 150 160
pF1KE2 KFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAEDQE
.:.:::::. :::..::. ... : : :: .: .. .. :: :.:..
CCDS11 DYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHG-AKDKDD
120 130 140 150 160 170
>>CCDS77145.1 MYL12A gene_id:10627|Hs108|chr18 (177 aa)
initn: 576 init1: 369 opt: 605 Z-score: 705.5 bits: 137.0 E(32554): 5.7e-33
Smith-Waterman score: 605; 55.2% identity (80.8% similar) in 172 aa overlap (1-169:7-176)
10 20 30 40 50
pF1KE2 MAPKRAKRRTV---EGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLR
:. ::.: .: . ..:.::.::::.:::::::::..:::::::.::::::.
CCDS77 MDLTTTMSSKRTKTKTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLH
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 DTFAAMGRLNVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEG
: .:..:. : .: :::::.:: ::::::.:::::::::.:.:::::: .:: .: :.
CCDS77 DMLASLGK-NPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEA
70 80 90 100 110
120 130 140 150 160
pF1KE2 KGTIKKKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAEDQE
:::.. .:.:::::. :::..::. ... : : :: .: .. .. :: :.:..
CCDS77 TGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHG-AKDKDD
120 130 140 150 160 170
>>CCDS11831.1 MYL12B gene_id:103910|Hs108|chr18 (172 aa)
initn: 567 init1: 360 opt: 600 Z-score: 699.9 bits: 135.9 E(32554): 1.2e-32
Smith-Waterman score: 600; 54.3% identity (80.3% similar) in 173 aa overlap (1-169:1-171)
10 20 30 40 50
pF1KE2 MAPKRAKRRTVEG----GSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAA
:. :.:: .:.. ..:.::.::::.:::::::::..:::::::.::::::.: .:.
CCDS11 MSSKKAKTKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 MGRLNVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIK
.:. : . :::::.:: ::::::.:::::::::.:.:::::: .:: .: :. :::.
CCDS11 LGK-NPTDAYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQ
70 80 90 100 110
120 130 140 150 160
pF1KE2 KKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAEDQE
. .:.:::::. :::..::. ... : : :: .: .. .. :: :.:..
CCDS11 EDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHG-AKDKDD
120 130 140 150 160 170
>>CCDS13276.1 MYL9 gene_id:10398|Hs108|chr20 (172 aa)
initn: 573 init1: 349 opt: 590 Z-score: 688.5 bits: 133.8 E(32554): 5e-32
Smith-Waterman score: 590; 54.3% identity (80.3% similar) in 173 aa overlap (1-169:1-171)
10 20 30 40 50
pF1KE2 MAPKRAKRRTVEG----GSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAA
:. :::: .:.. ..:.::.::::.:::::::::..:::::::.::::::.: .:.
CCDS13 MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 MGRLNVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIK
.:. : .: :..::.:: ::::::.:::::::::.:.:::::: .:: .: :..: :.
CCDS13 LGK-NPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIH
70 80 90 100 110
120 130 140 150 160
pF1KE2 KKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAEDQE
. :.:::::. :::..::. .:. : : :: .: .. .. :: :.:..
CCDS13 EDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHG-AKDKDD
120 130 140 150 160 170
>>CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 (149 aa)
initn: 283 init1: 136 opt: 268 Z-score: 321.2 bits: 65.6 E(32554): 1.4e-11
Smith-Waterman score: 268; 34.5% identity (67.6% similar) in 148 aa overlap (21-161:1-147)
10 20 30 40 50
pF1KE2 MAPKRAKRRTVEGGSSSVFSMFDQT---QIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAM
: :: :: ::::::...:.. :: : ..: .. ..
CCDS18 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL
10 20 30 40
60 70 80 90 100 110
pF1KE2 GRLNVKNEELDAMMKEA----SGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKG
:. : . ::. :..:. .: :.: ::::...:.: .: :. : ::.:.: .:.:
CCDS18 GQ-NPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG
50 60 70 80 90
120 130 140 150 160
pF1KE2 TIKKKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAEDQE
:. :....:. .....::. .: : :.:.:... ..:
CCDS18 YISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
100 110 120 130 140
169 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 18:10:52 2016 done: Fri Nov 4 18:10:53 2016
Total Scan time: 1.870 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]