Result of FASTA (omim) for
pF1KE2552
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2552, 167 aa
1>>>pF1KE2552 167 - 167 aa - 167 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8784+/-0.000414; mu= 14.5244+/- 0.026
mean_var=65.0049+/-12.986, 0's: 0 Z-trim(110.9): 150 B-trim: 62 in 1/52
Lambda= 0.159075
statistics sampled from 19118 (19297) to 19118 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.592), E-opt: 0.2 (0.226), width: 16
Scan time: 4.040
The best scores are: opt bits E(85289)
NP_742001 (OMIM: 607467) C-type lectin-like domain ( 167) 1113 264.1 7.4e-71
NP_001240679 (OMIM: 607467) C-type lectin-like dom ( 191) 1082 257.0 1.1e-68
XP_011518876 (OMIM: 607467) PREDICTED: C-type lect ( 191) 1082 257.0 1.1e-68
NP_001254630 (OMIM: 607467) C-type lectin-like dom ( 167) 1081 256.8 1.2e-68
XP_016874374 (OMIM: 607467) PREDICTED: C-type lect ( 135) 724 174.8 4.7e-44
NP_001772 (OMIM: 107273) early activation antigen ( 199) 148 42.7 0.0004
XP_006721587 (OMIM: 108361) PREDICTED: asialoglyco ( 248) 146 42.3 0.00065
NP_550435 (OMIM: 108361) asialoglycoprotein recept ( 287) 146 42.4 0.00072
XP_005256705 (OMIM: 108361) PREDICTED: asialoglyco ( 287) 146 42.4 0.00072
XP_006721589 (OMIM: 108361) PREDICTED: asialoglyco ( 287) 146 42.4 0.00072
XP_016880140 (OMIM: 108361) PREDICTED: asialoglyco ( 292) 146 42.4 0.00073
NP_550436 (OMIM: 108361) asialoglycoprotein recept ( 292) 146 42.4 0.00073
XP_011522168 (OMIM: 108361) PREDICTED: asialoglyco ( 299) 146 42.4 0.00075
XP_011522165 (OMIM: 108361) PREDICTED: asialoglyco ( 299) 146 42.4 0.00075
XP_011522167 (OMIM: 108361) PREDICTED: asialoglyco ( 299) 146 42.4 0.00075
NP_001188281 (OMIM: 108361) asialoglycoprotein rec ( 306) 146 42.4 0.00076
XP_016880141 (OMIM: 108361) PREDICTED: asialoglyco ( 311) 146 42.4 0.00077
XP_016880142 (OMIM: 108361) PREDICTED: asialoglyco ( 311) 146 42.4 0.00077
NP_550434 (OMIM: 108361) asialoglycoprotein recept ( 311) 146 42.4 0.00077
NP_001172 (OMIM: 108361) asialoglycoprotein recept ( 311) 146 42.4 0.00077
XP_011522166 (OMIM: 108361) PREDICTED: asialoglyco ( 318) 146 42.4 0.00078
XP_011522164 (OMIM: 108361) PREDICTED: asialoglyco ( 410) 146 42.5 0.00095
NP_919432 (OMIM: 605306) C-type lectin domain fami ( 204) 142 41.3 0.001
NP_031386 (OMIM: 611817) NKG2-D type II integral m ( 216) 135 39.7 0.0033
XP_016867406 (OMIM: 604987) PREDICTED: C-type lect ( 141) 132 38.9 0.0039
NP_001316999 (OMIM: 605999) C-type lectin domain f ( 289) 135 39.8 0.0042
NP_001288096 (OMIM: 604987) C-type lectin domain f ( 165) 132 39.0 0.0044
NP_878910 (OMIM: 605999) C-type lectin domain fami ( 316) 135 39.9 0.0045
XP_016874871 (OMIM: 605306) PREDICTED: C-type lect ( 142) 131 38.7 0.0046
NP_919430 (OMIM: 605306) C-type lectin domain fami ( 165) 131 38.7 0.0051
NP_919429 (OMIM: 605306) C-type lectin domain fami ( 198) 131 38.8 0.0059
XP_011518986 (OMIM: 605306) PREDICTED: C-type lect ( 200) 131 38.8 0.0059
NP_057268 (OMIM: 605306) C-type lectin domain fami ( 237) 131 38.9 0.0068
NP_001278751 (OMIM: 605029) killer cell lectin-lik ( 181) 129 38.3 0.0076
NP_001291377 (OMIM: 161555) NKG2-A/NKG2-B type II ( 228) 130 38.6 0.0077
NP_002250 (OMIM: 161555) NKG2-A/NKG2-B type II int ( 233) 130 38.6 0.0078
NP_998823 (OMIM: 161555) NKG2-A/NKG2-B type II int ( 233) 130 38.6 0.0078
NP_006335 (OMIM: 605999) C-type lectin domain fami ( 292) 131 38.9 0.008
XP_016867405 (OMIM: 604987) PREDICTED: C-type lect ( 164) 128 38.1 0.0082
XP_016867404 (OMIM: 604987) PREDICTED: C-type lect ( 168) 128 38.1 0.0084
XP_011521917 (OMIM: 605999) PREDICTED: C-type lect ( 315) 131 38.9 0.0084
XP_011521915 (OMIM: 605999) PREDICTED: C-type lect ( 319) 131 39.0 0.0085
XP_011521916 (OMIM: 605999) PREDICTED: C-type lect ( 319) 131 39.0 0.0085
NP_001287659 (OMIM: 612088) C-type lectin domain f ( 213) 129 38.4 0.0086
XP_006719099 (OMIM: 612088) PREDICTED: C-type lect ( 230) 129 38.4 0.0091
NP_037384 (OMIM: 604987) C-type lectin domain fami ( 188) 128 38.1 0.0091
XP_011518875 (OMIM: 612088) PREDICTED: C-type lect ( 231) 129 38.4 0.0091
NP_057607 (OMIM: 605029) killer cell lectin-like r ( 231) 129 38.4 0.0091
NP_963917 (OMIM: 612088) C-type lectin domain fami ( 232) 129 38.4 0.0092
XP_006719098 (OMIM: 612088) PREDICTED: C-type lect ( 232) 129 38.4 0.0092
>>NP_742001 (OMIM: 607467) C-type lectin-like domain fam (167 aa)
initn: 1113 init1: 1113 opt: 1113 Z-score: 1393.1 bits: 264.1 E(85289): 7.4e-71
Smith-Waterman score: 1113; 100.0% identity (100.0% similar) in 167 aa overlap (1-167:1-167)
10 20 30 40 50 60
pF1KE2 MVSNFFHVIQVFEKSATLISKTEHIGFVIYSWRKSTTHLGSRRKFAISIYLSEVSLQKYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_742 MVSNFFHVIQVFEKSATLISKTEHIGFVIYSWRKSTTHLGSRRKFAISIYLSEVSLQKYD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CPFSGTSFVVFSLFLICAMAGDVVYADIKTVRTSPLELAFPLQRSVSFNFSTVHKSCPAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_742 CPFSGTSFVVFSLFLICAMAGDVVYADIKTVRTSPLELAFPLQRSVSFNFSTVHKSCPAK
70 80 90 100 110 120
130 140 150 160
pF1KE2 DWKVHKGKCYWIAETKKSWNKSQNDCAINNSYLMVIQDITAMVRFNI
:::::::::::::::::::::::::::::::::::::::::::::::
NP_742 DWKVHKGKCYWIAETKKSWNKSQNDCAINNSYLMVIQDITAMVRFNI
130 140 150 160
>>NP_001240679 (OMIM: 607467) C-type lectin-like domain (191 aa)
initn: 1117 init1: 1082 opt: 1082 Z-score: 1353.8 bits: 257.0 E(85289): 1.1e-68
Smith-Waterman score: 1082; 99.4% identity (100.0% similar) in 163 aa overlap (1-163:1-163)
10 20 30 40 50 60
pF1KE2 MVSNFFHVIQVFEKSATLISKTEHIGFVIYSWRKSTTHLGSRRKFAISIYLSEVSLQKYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MVSNFFHVIQVFEKSATLISKTEHIGFVIYSWRKSTTHLGSRRKFAISIYLSEVSLQKYD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CPFSGTSFVVFSLFLICAMAGDVVYADIKTVRTSPLELAFPLQRSVSFNFSTVHKSCPAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CPFSGTSFVVFSLFLICAMAGDVVYADIKTVRTSPLELAFPLQRSVSFNFSTVHKSCPAK
70 80 90 100 110 120
130 140 150 160
pF1KE2 DWKVHKGKCYWIAETKKSWNKSQNDCAINNSYLMVIQDITAMVRFNI
::::::::::::::::::::::::::::::::::::::::::.
NP_001 DWKVHKGKCYWIAETKKSWNKSQNDCAINNSYLMVIQDITAMLITFLLYLQMAFLQCVYI
130 140 150 160 170 180
NP_001 SDVSVYPNFFL
190
>>XP_011518876 (OMIM: 607467) PREDICTED: C-type lectin-l (191 aa)
initn: 1117 init1: 1082 opt: 1082 Z-score: 1353.8 bits: 257.0 E(85289): 1.1e-68
Smith-Waterman score: 1082; 99.4% identity (100.0% similar) in 163 aa overlap (1-163:1-163)
10 20 30 40 50 60
pF1KE2 MVSNFFHVIQVFEKSATLISKTEHIGFVIYSWRKSTTHLGSRRKFAISIYLSEVSLQKYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVSNFFHVIQVFEKSATLISKTEHIGFVIYSWRKSTTHLGSRRKFAISIYLSEVSLQKYD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CPFSGTSFVVFSLFLICAMAGDVVYADIKTVRTSPLELAFPLQRSVSFNFSTVHKSCPAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CPFSGTSFVVFSLFLICAMAGDVVYADIKTVRTSPLELAFPLQRSVSFNFSTVHKSCPAK
70 80 90 100 110 120
130 140 150 160
pF1KE2 DWKVHKGKCYWIAETKKSWNKSQNDCAINNSYLMVIQDITAMVRFNI
::::::::::::::::::::::::::::::::::::::::::.
XP_011 DWKVHKGKCYWIAETKKSWNKSQNDCAINNSYLMVIQDITAMLITFLLYLQMAFLQCVYI
130 140 150 160 170 180
XP_011 SDVSVYPNFFL
190
>>NP_001254630 (OMIM: 607467) C-type lectin-like domain (167 aa)
initn: 1081 init1: 1081 opt: 1081 Z-score: 1353.4 bits: 256.8 E(85289): 1.2e-68
Smith-Waterman score: 1081; 100.0% identity (100.0% similar) in 162 aa overlap (1-162:1-162)
10 20 30 40 50 60
pF1KE2 MVSNFFHVIQVFEKSATLISKTEHIGFVIYSWRKSTTHLGSRRKFAISIYLSEVSLQKYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MVSNFFHVIQVFEKSATLISKTEHIGFVIYSWRKSTTHLGSRRKFAISIYLSEVSLQKYD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CPFSGTSFVVFSLFLICAMAGDVVYADIKTVRTSPLELAFPLQRSVSFNFSTVHKSCPAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CPFSGTSFVVFSLFLICAMAGDVVYADIKTVRTSPLELAFPLQRSVSFNFSTVHKSCPAK
70 80 90 100 110 120
130 140 150 160
pF1KE2 DWKVHKGKCYWIAETKKSWNKSQNDCAINNSYLMVIQDITAMVRFNI
::::::::::::::::::::::::::::::::::::::::::
NP_001 DWKVHKGKCYWIAETKKSWNKSQNDCAINNSYLMVIQDITAMKSNLF
130 140 150 160
>>XP_016874374 (OMIM: 607467) PREDICTED: C-type lectin-l (135 aa)
initn: 740 init1: 724 opt: 724 Z-score: 911.9 bits: 174.8 E(85289): 4.7e-44
Smith-Waterman score: 724; 99.1% identity (100.0% similar) in 106 aa overlap (58-163:2-107)
30 40 50 60 70 80
pF1KE2 VIYSWRKSTTHLGSRRKFAISIYLSEVSLQKYDCPFSGTSFVVFSLFLICAMAGDVVYAD
::::::::::::::::::::::::::::::
XP_016 MKYDCPFSGTSFVVFSLFLICAMAGDVVYAD
10 20 30
90 100 110 120 130 140
pF1KE2 IKTVRTSPLELAFPLQRSVSFNFSTVHKSCPAKDWKVHKGKCYWIAETKKSWNKSQNDCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IKTVRTSPLELAFPLQRSVSFNFSTVHKSCPAKDWKVHKGKCYWIAETKKSWNKSQNDCA
40 50 60 70 80 90
150 160
pF1KE2 INNSYLMVIQDITAMVRFNI
:::::::::::::::.
XP_016 INNSYLMVIQDITAMLITFLLYLQMAFLQCVYISDVSVYPNFFL
100 110 120 130
>>NP_001772 (OMIM: 107273) early activation antigen CD69 (199 aa)
initn: 163 init1: 118 opt: 148 Z-score: 195.1 bits: 42.7 E(85289): 0.0004
Smith-Waterman score: 148; 28.7% identity (63.4% similar) in 101 aa overlap (71-165:37-135)
50 60 70 80 90
pF1KE2 SRRKFAISIYLSEVSLQKYDCPFSGTSFVVFSLFLICAMAGDVVYADIKTVRTSPLELA-
:.. ..::. .::. : . : ..
NP_001 FVAENSSLHPESGQENDATSPHFSTRHEGSFQVPVLCAVM-NVVFITILIIALIALSVGQ
10 20 30 40 50 60
100 110 120 130 140 150
pF1KE2 --FPLQRSVSFNFSTVHKSCPAKDWKVHKGKCYWIAETKKSWNKSQNDCAINNSYLMVI-
: : . :. .. .:: ..:: .. :::.:. .:.::...:: :. ... : ::
NP_001 YNCPGQYTFSMPSDSHVSSC-SEDWVGYQRKCYFISTVKRSWTSAQNACSEHGATLAVID
70 80 90 100 110 120
160
pF1KE2 --QDITAMVRFNI
.:.. . :.
NP_001 SEKDMNFLKRYAGREEHWVGLKKEPGHPWKWSNGKEFNNWFNVTGSDKCVFLKNTEVSSM
130 140 150 160 170 180
>>XP_006721587 (OMIM: 108361) PREDICTED: asialoglycoprot (248 aa)
initn: 119 init1: 119 opt: 146 Z-score: 191.3 bits: 42.3 E(85289): 0.00065
Smith-Waterman score: 146; 27.4% identity (69.4% similar) in 62 aa overlap (95-156:91-152)
70 80 90 100 110 120
pF1KE2 GTSFVVFSLFLICAMAGDVVYADIKTVRTSPLELAFPLQRSVSFNFSTVHKSCPAKDWKV
:..: : . .. . ...: .:
XP_006 KITSLGAKLEKQQQDLKADHDALLFHLKHFPVDLRFVACQMELLHSNGSQRTCCPVNWVE
70 80 90 100 110 120
130 140 150 160
pF1KE2 HKGKCYWIAETKKSWNKSQNDCAINNSYLMVIQDITAMVRFNI
:.:.:::.... :.: .... : ..:..:.::
XP_006 HQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTWIGLTDSDGS
130 140 150 160 170 180
XP_006 WKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQPDGRWNDDFCLQVYRWVCEKR
190 200 210 220 230 240
>>NP_550435 (OMIM: 108361) asialoglycoprotein receptor 2 (287 aa)
initn: 140 init1: 119 opt: 146 Z-score: 190.4 bits: 42.4 E(85289): 0.00072
Smith-Waterman score: 146; 27.4% identity (69.4% similar) in 62 aa overlap (95-156:130-191)
70 80 90 100 110 120
pF1KE2 GTSFVVFSLFLICAMAGDVVYADIKTVRTSPLELAFPLQRSVSFNFSTVHKSCPAKDWKV
:..: : . .. . ...: .:
NP_550 KITSLGAKLEKQQQDLKADHDALLFHLKHFPVDLRFVACQMELLHSNGSQRTCCPVNWVE
100 110 120 130 140 150
130 140 150 160
pF1KE2 HKGKCYWIAETKKSWNKSQNDCAINNSYLMVIQDITAMVRFNI
:.:.:::.... :.: .... : ..:..:.::
NP_550 HQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTWIGLTDSDGS
160 170 180 190 200 210
NP_550 WKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQPDGRWNDDFCLQVYRWVCEKR
220 230 240 250 260 270
>>XP_005256705 (OMIM: 108361) PREDICTED: asialoglycoprot (287 aa)
initn: 140 init1: 119 opt: 146 Z-score: 190.4 bits: 42.4 E(85289): 0.00072
Smith-Waterman score: 146; 27.4% identity (69.4% similar) in 62 aa overlap (95-156:130-191)
70 80 90 100 110 120
pF1KE2 GTSFVVFSLFLICAMAGDVVYADIKTVRTSPLELAFPLQRSVSFNFSTVHKSCPAKDWKV
:..: : . .. . ...: .:
XP_005 KITSLGAKLEKQQQDLKADHDALLFHLKHFPVDLRFVACQMELLHSNGSQRTCCPVNWVE
100 110 120 130 140 150
130 140 150 160
pF1KE2 HKGKCYWIAETKKSWNKSQNDCAINNSYLMVIQDITAMVRFNI
:.:.:::.... :.: .... : ..:..:.::
XP_005 HQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTWIGLTDSDGS
160 170 180 190 200 210
XP_005 WKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQPDGRWNDDFCLQVYRWVCEKR
220 230 240 250 260 270
>>XP_006721589 (OMIM: 108361) PREDICTED: asialoglycoprot (287 aa)
initn: 140 init1: 119 opt: 146 Z-score: 190.4 bits: 42.4 E(85289): 0.00072
Smith-Waterman score: 146; 27.4% identity (69.4% similar) in 62 aa overlap (95-156:130-191)
70 80 90 100 110 120
pF1KE2 GTSFVVFSLFLICAMAGDVVYADIKTVRTSPLELAFPLQRSVSFNFSTVHKSCPAKDWKV
:..: : . .. . ...: .:
XP_006 KITSLGAKLEKQQQDLKADHDALLFHLKHFPVDLRFVACQMELLHSNGSQRTCCPVNWVE
100 110 120 130 140 150
130 140 150 160
pF1KE2 HKGKCYWIAETKKSWNKSQNDCAINNSYLMVIQDITAMVRFNI
:.:.:::.... :.: .... : ..:..:.::
XP_006 HQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTWIGLTDSDGS
160 170 180 190 200 210
XP_006 WKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQPDGRWNDDFCLQVYRWVCEKR
220 230 240 250 260 270
167 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 02:17:17 2016 done: Tue Nov 8 02:17:17 2016
Total Scan time: 4.040 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]