Result of FASTA (ccds) for
pF1KE2454
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2454, 846 aa
1>>>pF1KE2454 846 - 846 aa - 846 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.3433+/-0.00108; mu= -0.8520+/- 0.065
mean_var=265.9767+/-53.819, 0's: 0 Z-trim(112.5): 13 B-trim: 0 in 0/53
Lambda= 0.078642
statistics sampled from 13220 (13225) to 13220 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.722), E-opt: 0.2 (0.406), width: 16
Scan time: 3.640
The best scores are: opt bits E(32554)
CCDS43607.1 RSBN1L gene_id:222194|Hs108|chr7 ( 846) 5625 652.0 1.3e-186
CCDS862.1 RSBN1 gene_id:54665|Hs108|chr1 ( 802) 2205 263.9 7.9e-70
>>CCDS43607.1 RSBN1L gene_id:222194|Hs108|chr7 (846 aa)
initn: 5625 init1: 5625 opt: 5625 Z-score: 3463.9 bits: 652.0 E(32554): 1.3e-186
Smith-Waterman score: 5625; 100.0% identity (100.0% similar) in 846 aa overlap (1-846:1-846)
10 20 30 40 50 60
pF1KE2 MAEPPSPVHCVAAAAPTATVSEKEPFGKLQLSSRDPPGSLSAKKVRTEEKKAPRRVNGEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MAEPPSPVHCVAAAAPTATVSEKEPFGKLQLSSRDPPGSLSAKKVRTEEKKAPRRVNGEG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GSGGNSRQLQPPAAPSPQSYGSPASWSFAPLSAAPSPSSSRSSFSFSAGTAVPSSASASL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GSGGNSRQLQPPAAPSPQSYGSPASWSFAPLSAAPSPSSSRSSFSFSAGTAVPSSASASL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SQPVPRKLLVPPTLLHAQPHHLLLPAAAAAASANAKSRRPKEKREKERRRHGLGGAREAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SQPVPRKLLVPPTLLHAQPHHLLLPAAAAAASANAKSRRPKEKREKERRRHGLGGAREAG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 GASREENGEVKPLPRDKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GASREENGEVKPLPRDKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 KTNIEDLQIKKVKKKKKKKHKENEKRKRPKMYSKSIQTICSGLLTDVEDQAAKGILNDNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KTNIEDLQIKKVKKKKKKKHKENEKRKRPKMYSKSIQTICSGLLTDVEDQAAKGILNDNI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 KDYVGKNLDTKNYDSKIPENSEFPFVSLKEPRVQNNLKRLDTLEFKQLIHIEHQPNGGAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KDYVGKNLDTKNYDSKIPENSEFPFVSLKEPRVQNNLKRLDTLEFKQLIHIEHQPNGGAS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 VIHAYSNELSHLSPMEMERFAEEFVGLVFSENENSAAFYVMGIVHGAATYLPDFLDYFSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VIHAYSNELSHLSPMEMERFAEEFVGLVFSENENSAAFYVMGIVHGAATYLPDFLDYFSF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 NFPNSPVKMEILGKKDIETTTMSNFHAQVKRTYSHGTYRAGPMRQISLVGAVDEEVGDYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 NFPNSPVKMEILGKKDIETTTMSNFHAQVKRTYSHGTYRAGPMRQISLVGAVDEEVGDYF
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 PEFLDMLEESPFLKCTLPWGTLSSLKLQSRKDSDDGPIMWVRPGEQMIPVADMPKSPFKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PEFLDMLEESPFLKCTLPWGTLSSLKLQSRKDSDDGPIMWVRPGEQMIPVADMPKSPFKR
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 KRTTNEIKNLQYLPRTSEPREMLFEDRTRAHADHIGQGFERQTTAAVGVLKAVHCGEWPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KRTTNEIKNLQYLPRTSEPREMLFEDRTRAHADHIGQGFERQTTAAVGVLKAVHCGEWPD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 QPRITKDVICFHAEDFLEVVQRMQLDLHEPPLSQCVQWVDDAKLNQLRREGIRYARIQLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QPRITKDVICFHAEDFLEVVQRMQLDLHEPPLSQCVQWVDDAKLNQLRREGIRYARIQLY
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE2 DNDIYFIPRNVVHQFKTVSAVCSLAWHIRLKLYHSEEDTSQNTATHETGTSSDSTSSVLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DNDIYFIPRNVVHQFKTVSAVCSLAWHIRLKLYHSEEDTSQNTATHETGTSSDSTSSVLG
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE2 PHTDNMICAVSKASLDSVFSDKLHSKYELQQIKHEPIASVRIKEEPVNVNIPEKTTALNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PHTDNMICAVSKASLDSVFSDKLHSKYELQQIKHEPIASVRIKEEPVNVNIPEKTTALNN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE2 MDGKNVKAKLDHVQFAEFKIDMDSKFENSNKDLKEELCPGNLSLVDTRQHSSAHSNQDKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MDGKNVKAKLDHVQFAEFKIDMDSKFENSNKDLKEELCPGNLSLVDTRQHSSAHSNQDKK
790 800 810 820 830 840
pF1KE2 DDDILC
::::::
CCDS43 DDDILC
>>CCDS862.1 RSBN1 gene_id:54665|Hs108|chr1 (802 aa)
initn: 2274 init1: 2076 opt: 2205 Z-score: 1367.2 bits: 263.9 E(32554): 7.9e-70
Smith-Waterman score: 2353; 57.2% identity (75.8% similar) in 664 aa overlap (64-706:84-717)
40 50 60 70 80 90
pF1KE2 RDPPGSLSAKKVRTEEKKAPRRVNGEGGSGGNSRQLQPPAAPSPQSYGSPASWSFAPLSA
: .:: . .. : .. : :.. ::
CCDS86 GAVRVVRAVAAQEEPDKEGKEKPHAGVSPRGVKRQRRSSSGGSQEKRGRPSQE--PPL--
60 70 80 90 100
100 110 120 130 140 150
pF1KE2 APSPSSSRSSFSFSAGTAVPSSASASLSQPVPRKLLVPP---TLLHAQPHHLLLPAAAAA
:: : : : . : :..:. .. :: :: :: .: : : . : : .
CCDS86 AP-PHRRRRSRQHP-GPLPPTNAAPTVPGPVEPLLLPPPPPPSLAPAGPA-VAAPLPAPS
110 120 130 140 150 160
160 170 180 190 200
pF1KE2 ASA-------NAKSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIK
.:: .... ::.: .:::..: : .:. : . : .:
CCDS86 TSALFTFSPLTVSAAGPKHKGHKERHKHH---------HHRGPDGD----PSSCGTD-LK
170 180 190 200 210
210 220 230 240 250 260
pF1KE2 ERDKEKEREKKKH-KVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKE
..::... :. ... :.:. . ..:: . .:. .::.::::::::.:
CCDS86 HKDKQENGERTGGVPLIKAPKRETPD-----ENGKTQ---RADDFVLKKIKKKKKKKHRE
220 230 240 250 260
270 280 290 300 310
pF1KE2 NEKRKRPKMYSKSIQTICSGLLTDVEDQAAKGILNDN----------IKDYVGKNLDTKN
. . .: :::.: .::.:.:: .. ..: .:.. .:: :.
CCDS86 DMRGRRLKMYNKEVQTVCAGLTRISKEILTQGQINSTSGLNKESFRYLKDEQLCRLNLGM
270 280 290 300 310 320
320 330 340 350 360 370
pF1KE2 YDSKIPENSEFPFVSLKEPRVQNNLKRLDTLEFKQLIHIEHQPNGGASVIHAYSNELSHL
. ..:.. . ::.. .: .. :. . : .:...:: ::: :::: :.::: .::: :
CCDS86 QEYRVPQGVQTPFMTHQEHSIRRNFLKTGT-KFSNFIHEEHQSNGGALVLHAYMDELSFL
330 340 350 360 370 380
380 390 400 410 420 430
pF1KE2 SPMEMERFAEEFVGLVFSENENSAAFYVMGIVHGAATYLPDFLDYFSFNFPNSPVKMEIL
::::::::.:::..:.:::::..::.:...::::::.:::::::::.:::::.:::::::
CCDS86 SPMEMERFSEEFLALTFSENEKNAAYYALAIVHGAAAYLPDFLDYFAFNFPNTPVKMEIL
390 400 410 420 430 440
440 450 460 470 480 490
pF1KE2 GKKDIETTTMSNFHAQVKRTYSHGTYRAGPMRQISLVGAVDEEVGDYFPEFLDMLEESPF
:::::::::.::::.::.::: :::::::::::::::::::::::::::::::::::::
CCDS86 GKKDIETTTISNFHTQVNRTYCCGTYRAGPMRQISLVGAVDEEVGDYFPEFLDMLEESPF
450 460 470 480 490 500
500 510 520 530 540 550
pF1KE2 LKCTLPWGTLSSLKLQSRKDSDDGPIMWVRPGEQMIPVADMPKSPFKRKRTTNEIKNLQY
:: ::::::::::.:: :..:::::::::::::::::.::::::::::.:. ::::::::
CCDS86 LKMTLPWGTLSSLRLQCRSQSDDGPIMWVRPGEQMIPTADMPKSPFKRRRSMNEIKNLQY
510 520 530 540 550 560
560 570 580 590 600 610
pF1KE2 LPRTSEPREMLFEDRTRAHADHIGQGFERQTTAAVGVLKAVHCGEWPDQPRITKDVICFH
:::::::::.::::::::::::.::::. :.::::::::::. ::: :::::::::::::
CCDS86 LPRTSEPREVLFEDRTRAHADHVGQGFDWQSTAAVGVLKAVQFGEWSDQPRITKDVICFH
570 580 590 600 610 620
620 630 640 650 660 670
pF1KE2 AEDFLEVVQRMQLDLHEPPLSQCVQWVDDAKLNQLRREGIRYARIQLYDNDIYFIPRNVV
:::: .::::.::::::::.::::::::.:::::.:::::::::::: :::::::::::.
CCDS86 AEDFTDVVQRLQLDLHEPPVSQCVQWVDEAKLNQMRREGIRYARIQLCDNDIYFIPRNVI
630 640 650 660 670 680
680 690 700 710 720 730
pF1KE2 HQFKTVSAVCSLAWHIRLKLYHSEEDTSQNTATHETGTSSDSTSSVLGPHTDNMICAVSK
::::::::::::::::::: :: ...::: ..
CCDS86 HQFKTVSAVCSLAWHIRLKQYHPVVEATQNTESNSNMDCGLTGKRELEVDSQCVRIKTES
690 700 710 720 730 740
740 750 760 770 780 790
pF1KE2 ASLDSVFSDKLHSKYELQQIKHEPIASVRIKEEPVNVNIPEKTTALNNMDGKNVKAKLDH
CCDS86 EEACTEIQLLTTASSSFPPASELNLQQDQKTQPIPVLKVESRLDSDQQHNLQEHSTTSV
750 760 770 780 790 800
846 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 14:59:02 2016 done: Sat Nov 5 14:59:03 2016
Total Scan time: 3.640 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]