Result of FASTA (ccds) for
pF1KE2395
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2395, 1129 aa
1>>>pF1KE2395 1129 - 1129 aa - 1129 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.0912+/-0.00114; mu= 8.8669+/- 0.068
mean_var=171.1400+/-34.690, 0's: 0 Z-trim(107.3): 93 B-trim: 25 in 1/49
Lambda= 0.098039
statistics sampled from 9399 (9487) to 9399 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.643), E-opt: 0.2 (0.291), width: 16
Scan time: 4.070
The best scores are: opt bits E(32554)
CCDS9721.1 WDHD1 gene_id:11169|Hs108|chr14 (1129) 7571 1084.4 0
CCDS41955.1 WDHD1 gene_id:11169|Hs108|chr14 (1006) 6737 966.4 0
>>CCDS9721.1 WDHD1 gene_id:11169|Hs108|chr14 (1129 aa)
initn: 7571 init1: 7571 opt: 7571 Z-score: 5796.7 bits: 1084.4 E(32554): 0
Smith-Waterman score: 7571; 100.0% identity (100.0% similar) in 1129 aa overlap (1-1129:1-1129)
10 20 30 40 50 60
pF1KE2 MPATRKPMRYGHTEGHTEVCFDDSGSFIVTCGSDGDVRIWEDLDDDDPKFINVGEKAYSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 MPATRKPMRYGHTEGHTEVCFDDSGSFIVTCGSDGDVRIWEDLDDDDPKFINVGEKAYSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 ALKSGKLVTAVSNNTIQVHTFPEGVPDGILTRFTTNANHVVFNGDGTKIAAGSSDFLVKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 ALKSGKLVTAVSNNTIQVHTFPEGVPDGILTRFTTNANHVVFNGDGTKIAAGSSDFLVKI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 VDVMDSSQQKTFRGHDAPVLSLSFDPKDIFLASASCDGSVRVWQISDQTCAISWPLLQKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 VDVMDSSQQKTFRGHDAPVLSLSFDPKDIFLASASCDGSVRVWQISDQTCAISWPLLQKC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NDVINAKSICRLAWQPKSGKLLAIPVEKSVKLYRRESWSHQFDLSDNFISQTLNIVTWSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 NDVINAKSICRLAWQPKSGKLLAIPVEKSVKLYRRESWSHQFDLSDNFISQTLNIVTWSP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 CGQYLAAGSINGLIIVWNVETKDCMERVKHEKGYAICGLAWHPTCGRISYTDAEGNLGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 CGQYLAAGSINGLIIVWNVETKDCMERVKHEKGYAICGLAWHPTCGRISYTDAEGNLGLL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 ENVCDPSGKTSSSKVSSRVEKDYNDLFDGDDMSNAGDFLNDNAVEIPSFSKGIINDDEDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 ENVCDPSGKTSSSKVSSRVEKDYNDLFDGDDMSNAGDFLNDNAVEIPSFSKGIINDDEDD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 EDLMMASGRPRQRSHILEDDENSVDISMLKTGSSLLKEEEEDGQEGSIHNLPLVTSQRPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 EDLMMASGRPRQRSHILEDDENSVDISMLKTGSSLLKEEEEDGQEGSIHNLPLVTSQRPF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 YDGPMPTPRQKPFQSGSTPLHLTHRFMVWNSIGIIRCYNDEQDNAIDVEFHDTSIHHATH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 YDGPMPTPRQKPFQSGSTPLHLTHRFMVWNSIGIIRCYNDEQDNAIDVEFHDTSIHHATH
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 LSNTLNYTIADLSHEAILLACESTDELASKLHCLHFSSWDSSKEWIIDLPQNEDIEAICL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 LSNTLNYTIADLSHEAILLACESTDELASKLHCLHFSSWDSSKEWIIDLPQNEDIEAICL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 GQGWAAAATSALLLRLFTIGGVQKEVFSLAGPVVSMAGHGEQLFIVYHRGTGFDGDQCLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 GQGWAAAATSALLLRLFTIGGVQKEVFSLAGPVVSMAGHGEQLFIVYHRGTGFDGDQCLG
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 VQLLELGKKKKQILHGDPLPLTRKSYLAWIGFSAEGTPCYVDSEGIVRMLNRGLGNTWTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 VQLLELGKKKKQILHGDPLPLTRKSYLAWIGFSAEGTPCYVDSEGIVRMLNRGLGNTWTP
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE2 ICNTREHCKGKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAILSFKLPYCQIAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 ICNTREHCKGKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAILSFKLPYCQIAT
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE2 EKGQMEEQFWRSVIFHNHLDYLAKNGYEYEESTKNQATKEQQELLMKMLALSCKLEREFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 EKGQMEEQFWRSVIFHNHLDYLAKNGYEYEESTKNQATKEQQELLMKMLALSCKLEREFR
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE2 CVELADLMTQNAVNLAIKYASRSRKLILAQKLSELAVEKAAELTATQVEEEEEEEDFRKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 CVELADLMTQNAVNLAIKYASRSRKLILAQKLSELAVEKAAELTATQVEEEEEEEDFRKK
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE2 LNAGYSNTATEWSQPRFRNQVEEDAEDSGEADDEEKPEIHKPGQNSFSKSTNSSDVSAKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 LNAGYSNTATEWSQPRFRNQVEEDAEDSGEADDEEKPEIHKPGQNSFSKSTNSSDVSAKS
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE2 GAVTFSSQGRVNPFKVSASSKEPAMSMNSARSTNILDNMGKSSKKSTALSRTTNNEKSPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 GAVTFSSQGRVNPFKVSASSKEPAMSMNSARSTNILDNMGKSSKKSTALSRTTNNEKSPI
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE2 IKPLIPKPKPKQASAASYFQKRNSQTNKTEEVKEENLKNVLSETPAICPPQNTENQRPKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 IKPLIPKPKPKQASAASYFQKRNSQTNKTEEVKEENLKNVLSETPAICPPQNTENQRPKT
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE2 GFQMWLEENRSNILSDNPDFSDEADIIKEGMIRFRVLSTEERKVWANKAKGETASEGTEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 GFQMWLEENRSNILSDNPDFSDEADIIKEGMIRFRVLSTEERKVWANKAKGETASEGTEA
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120
pF1KE2 KKRKRVVDESDETENQEEKAKENLNLSKKQKPLDFSTNQKLSAFAFKQE
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 KKRKRVVDESDETENQEEKAKENLNLSKKQKPLDFSTNQKLSAFAFKQE
1090 1100 1110 1120
>>CCDS41955.1 WDHD1 gene_id:11169|Hs108|chr14 (1006 aa)
initn: 6737 init1: 6737 opt: 6737 Z-score: 5159.9 bits: 966.4 E(32554): 0
Smith-Waterman score: 6737; 100.0% identity (100.0% similar) in 1006 aa overlap (124-1129:1-1006)
100 110 120 130 140 150
pF1KE2 TTNANHVVFNGDGTKIAAGSSDFLVKIVDVMDSSQQKTFRGHDAPVLSLSFDPKDIFLAS
::::::::::::::::::::::::::::::
CCDS41 MDSSQQKTFRGHDAPVLSLSFDPKDIFLAS
10 20 30
160 170 180 190 200 210
pF1KE2 ASCDGSVRVWQISDQTCAISWPLLQKCNDVINAKSICRLAWQPKSGKLLAIPVEKSVKLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 ASCDGSVRVWQISDQTCAISWPLLQKCNDVINAKSICRLAWQPKSGKLLAIPVEKSVKLY
40 50 60 70 80 90
220 230 240 250 260 270
pF1KE2 RRESWSHQFDLSDNFISQTLNIVTWSPCGQYLAAGSINGLIIVWNVETKDCMERVKHEKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 RRESWSHQFDLSDNFISQTLNIVTWSPCGQYLAAGSINGLIIVWNVETKDCMERVKHEKG
100 110 120 130 140 150
280 290 300 310 320 330
pF1KE2 YAICGLAWHPTCGRISYTDAEGNLGLLENVCDPSGKTSSSKVSSRVEKDYNDLFDGDDMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 YAICGLAWHPTCGRISYTDAEGNLGLLENVCDPSGKTSSSKVSSRVEKDYNDLFDGDDMS
160 170 180 190 200 210
340 350 360 370 380 390
pF1KE2 NAGDFLNDNAVEIPSFSKGIINDDEDDEDLMMASGRPRQRSHILEDDENSVDISMLKTGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 NAGDFLNDNAVEIPSFSKGIINDDEDDEDLMMASGRPRQRSHILEDDENSVDISMLKTGS
220 230 240 250 260 270
400 410 420 430 440 450
pF1KE2 SLLKEEEEDGQEGSIHNLPLVTSQRPFYDGPMPTPRQKPFQSGSTPLHLTHRFMVWNSIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SLLKEEEEDGQEGSIHNLPLVTSQRPFYDGPMPTPRQKPFQSGSTPLHLTHRFMVWNSIG
280 290 300 310 320 330
460 470 480 490 500 510
pF1KE2 IIRCYNDEQDNAIDVEFHDTSIHHATHLSNTLNYTIADLSHEAILLACESTDELASKLHC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 IIRCYNDEQDNAIDVEFHDTSIHHATHLSNTLNYTIADLSHEAILLACESTDELASKLHC
340 350 360 370 380 390
520 530 540 550 560 570
pF1KE2 LHFSSWDSSKEWIIDLPQNEDIEAICLGQGWAAAATSALLLRLFTIGGVQKEVFSLAGPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LHFSSWDSSKEWIIDLPQNEDIEAICLGQGWAAAATSALLLRLFTIGGVQKEVFSLAGPV
400 410 420 430 440 450
580 590 600 610 620 630
pF1KE2 VSMAGHGEQLFIVYHRGTGFDGDQCLGVQLLELGKKKKQILHGDPLPLTRKSYLAWIGFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 VSMAGHGEQLFIVYHRGTGFDGDQCLGVQLLELGKKKKQILHGDPLPLTRKSYLAWIGFS
460 470 480 490 500 510
640 650 660 670 680 690
pF1KE2 AEGTPCYVDSEGIVRMLNRGLGNTWTPICNTREHCKGKSDHYWVVGIHENPQQLRCIPCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 AEGTPCYVDSEGIVRMLNRGLGNTWTPICNTREHCKGKSDHYWVVGIHENPQQLRCIPCK
520 530 540 550 560 570
700 710 720 730 740 750
pF1KE2 GSRFPPTLPRPAVAILSFKLPYCQIATEKGQMEEQFWRSVIFHNHLDYLAKNGYEYEEST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GSRFPPTLPRPAVAILSFKLPYCQIATEKGQMEEQFWRSVIFHNHLDYLAKNGYEYEEST
580 590 600 610 620 630
760 770 780 790 800 810
pF1KE2 KNQATKEQQELLMKMLALSCKLEREFRCVELADLMTQNAVNLAIKYASRSRKLILAQKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 KNQATKEQQELLMKMLALSCKLEREFRCVELADLMTQNAVNLAIKYASRSRKLILAQKLS
640 650 660 670 680 690
820 830 840 850 860 870
pF1KE2 ELAVEKAAELTATQVEEEEEEEDFRKKLNAGYSNTATEWSQPRFRNQVEEDAEDSGEADD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 ELAVEKAAELTATQVEEEEEEEDFRKKLNAGYSNTATEWSQPRFRNQVEEDAEDSGEADD
700 710 720 730 740 750
880 890 900 910 920 930
pF1KE2 EEKPEIHKPGQNSFSKSTNSSDVSAKSGAVTFSSQGRVNPFKVSASSKEPAMSMNSARST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 EEKPEIHKPGQNSFSKSTNSSDVSAKSGAVTFSSQGRVNPFKVSASSKEPAMSMNSARST
760 770 780 790 800 810
940 950 960 970 980 990
pF1KE2 NILDNMGKSSKKSTALSRTTNNEKSPIIKPLIPKPKPKQASAASYFQKRNSQTNKTEEVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 NILDNMGKSSKKSTALSRTTNNEKSPIIKPLIPKPKPKQASAASYFQKRNSQTNKTEEVK
820 830 840 850 860 870
1000 1010 1020 1030 1040 1050
pF1KE2 EENLKNVLSETPAICPPQNTENQRPKTGFQMWLEENRSNILSDNPDFSDEADIIKEGMIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 EENLKNVLSETPAICPPQNTENQRPKTGFQMWLEENRSNILSDNPDFSDEADIIKEGMIR
880 890 900 910 920 930
1060 1070 1080 1090 1100 1110
pF1KE2 FRVLSTEERKVWANKAKGETASEGTEAKKRKRVVDESDETENQEEKAKENLNLSKKQKPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 FRVLSTEERKVWANKAKGETASEGTEAKKRKRVVDESDETENQEEKAKENLNLSKKQKPL
940 950 960 970 980 990
1120
pF1KE2 DFSTNQKLSAFAFKQE
::::::::::::::::
CCDS41 DFSTNQKLSAFAFKQE
1000
1129 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 09:28:16 2016 done: Sun Nov 6 09:28:16 2016
Total Scan time: 4.070 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]