Result of FASTA (omim) for
pF1KE2383
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2383, 490 aa
1>>>pF1KE2383 490 - 490 aa - 490 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4827+/-0.000507; mu= 15.3762+/- 0.032
mean_var=229.9442+/-50.711, 0's: 0 Z-trim(114.8): 354 B-trim: 2484 in 2/55
Lambda= 0.084579
statistics sampled from 24411 (24926) to 24411 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.644), E-opt: 0.2 (0.292), width: 16
Scan time: 8.940
The best scores are: opt bits E(85289)
NP_001313259 (OMIM: 602538) CUGBP Elav-like family ( 490) 3181 401.9 2.2e-111
NP_001313263 (OMIM: 602538) CUGBP Elav-like family ( 490) 3181 401.9 2.2e-111
NP_001313274 (OMIM: 602538) CUGBP Elav-like family ( 490) 3181 401.9 2.2e-111
XP_016871042 (OMIM: 602538) PREDICTED: CUGBP Elav- ( 490) 3181 401.9 2.2e-111
NP_001313257 (OMIM: 602538) CUGBP Elav-like family ( 490) 3181 401.9 2.2e-111
NP_001313253 (OMIM: 602538) CUGBP Elav-like family ( 490) 3181 401.9 2.2e-111
NP_001313247 (OMIM: 602538) CUGBP Elav-like family ( 490) 3181 401.9 2.2e-111
NP_001313249 (OMIM: 602538) CUGBP Elav-like family ( 490) 3181 401.9 2.2e-111
NP_001020247 (OMIM: 602538) CUGBP Elav-like family ( 490) 3181 401.9 2.2e-111
NP_001313278 (OMIM: 602538) CUGBP Elav-like family ( 490) 3181 401.9 2.2e-111
XP_005252411 (OMIM: 602538) PREDICTED: CUGBP Elav- ( 514) 3181 401.9 2.2e-111
XP_016871039 (OMIM: 602538) PREDICTED: CUGBP Elav- ( 514) 3181 401.9 2.2e-111
NP_001313260 (OMIM: 602538) CUGBP Elav-like family ( 514) 3181 401.9 2.2e-111
XP_016871033 (OMIM: 602538) PREDICTED: CUGBP Elav- ( 521) 3181 401.9 2.3e-111
NP_006552 (OMIM: 602538) CUGBP Elav-like family me ( 521) 3181 401.9 2.3e-111
NP_001313271 (OMIM: 602538) CUGBP Elav-like family ( 521) 3181 401.9 2.3e-111
NP_001313256 (OMIM: 602538) CUGBP Elav-like family ( 526) 3181 401.9 2.3e-111
XP_016871041 (OMIM: 602538) PREDICTED: CUGBP Elav- ( 494) 3162 399.5 1.1e-110
XP_016871031 (OMIM: 602538) PREDICTED: CUGBP Elav- ( 494) 3162 399.5 1.1e-110
XP_016871036 (OMIM: 602538) PREDICTED: CUGBP Elav- ( 518) 3162 399.6 1.1e-110
XP_016871032 (OMIM: 602538) PREDICTED: CUGBP Elav- ( 525) 3162 399.6 1.1e-110
NP_001313273 (OMIM: 602538) CUGBP Elav-like family ( 484) 3125 395.0 2.5e-109
NP_001313277 (OMIM: 602538) CUGBP Elav-like family ( 484) 3125 395.0 2.5e-109
NP_001313258 (OMIM: 602538) CUGBP Elav-like family ( 484) 3125 395.0 2.5e-109
XP_016871043 (OMIM: 602538) PREDICTED: CUGBP Elav- ( 484) 3125 395.0 2.5e-109
NP_001313246 (OMIM: 602538) CUGBP Elav-like family ( 484) 3125 395.0 2.5e-109
XP_011517599 (OMIM: 602538) PREDICTED: CUGBP Elav- ( 484) 3125 395.0 2.5e-109
NP_001077060 (OMIM: 602538) CUGBP Elav-like family ( 488) 3125 395.0 2.5e-109
NP_001313276 (OMIM: 602538) CUGBP Elav-like family ( 496) 3125 395.0 2.5e-109
NP_001313261 (OMIM: 602538) CUGBP Elav-like family ( 508) 3125 395.0 2.5e-109
XP_011517596 (OMIM: 602538) PREDICTED: CUGBP Elav- ( 508) 3125 395.0 2.5e-109
NP_001020248 (OMIM: 602538) CUGBP Elav-like family ( 508) 3125 395.0 2.5e-109
XP_016871040 (OMIM: 602538) PREDICTED: CUGBP Elav- ( 512) 3125 395.1 2.6e-109
NP_001313264 (OMIM: 602538) CUGBP Elav-like family ( 512) 3125 395.1 2.6e-109
NP_001313270 (OMIM: 602538) CUGBP Elav-like family ( 515) 3125 395.1 2.6e-109
XP_016871037 (OMIM: 602538) PREDICTED: CUGBP Elav- ( 515) 3125 395.1 2.6e-109
XP_016871038 (OMIM: 602538) PREDICTED: CUGBP Elav- ( 515) 3125 395.1 2.6e-109
XP_016871035 (OMIM: 602538) PREDICTED: CUGBP Elav- ( 519) 3125 395.1 2.6e-109
XP_016871034 (OMIM: 602538) PREDICTED: CUGBP Elav- ( 519) 3125 395.1 2.6e-109
NP_001313255 (OMIM: 602538) CUGBP Elav-like family ( 520) 3125 395.1 2.6e-109
NP_001313254 (OMIM: 602538) CUGBP Elav-like family ( 539) 3125 395.1 2.6e-109
NP_001313250 (OMIM: 602538) CUGBP Elav-like family ( 498) 3120 394.4 3.8e-109
XP_016871049 (OMIM: 602538) PREDICTED: CUGBP Elav- ( 403) 2579 328.3 2.6e-89
XP_016871048 (OMIM: 602538) PREDICTED: CUGBP Elav- ( 403) 2579 328.3 2.6e-89
XP_006717436 (OMIM: 602538) PREDICTED: CUGBP Elav- ( 403) 2579 328.3 2.6e-89
XP_016871050 (OMIM: 602538) PREDICTED: CUGBP Elav- ( 403) 2579 328.3 2.6e-89
NP_001313268 (OMIM: 602538) CUGBP Elav-like family ( 403) 2579 328.3 2.6e-89
XP_016872605 (OMIM: 601074) PREDICTED: CUGBP Elav- ( 487) 2565 326.7 9.3e-89
XP_016872612 (OMIM: 601074) PREDICTED: CUGBP Elav- ( 487) 2565 326.7 9.3e-89
XP_011518150 (OMIM: 601074) PREDICTED: CUGBP Elav- ( 487) 2565 326.7 9.3e-89
>>NP_001313259 (OMIM: 602538) CUGBP Elav-like family mem (490 aa)
initn: 3181 init1: 3181 opt: 3181 Z-score: 2120.7 bits: 401.9 E(85289): 2.2e-111
Smith-Waterman score: 3181; 100.0% identity (100.0% similar) in 490 aa overlap (1-490:1-490)
10 20 30 40 50 60
pF1KE2 MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 IVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 AFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 NSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 ILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQL
430 440 450 460 470 480
490
pF1KE2 KRSKNDSKPY
::::::::::
NP_001 KRSKNDSKPY
490
>>NP_001313263 (OMIM: 602538) CUGBP Elav-like family mem (490 aa)
initn: 3181 init1: 3181 opt: 3181 Z-score: 2120.7 bits: 401.9 E(85289): 2.2e-111
Smith-Waterman score: 3181; 100.0% identity (100.0% similar) in 490 aa overlap (1-490:1-490)
10 20 30 40 50 60
pF1KE2 MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 IVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 AFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 NSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 ILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQL
430 440 450 460 470 480
490
pF1KE2 KRSKNDSKPY
::::::::::
NP_001 KRSKNDSKPY
490
>>NP_001313274 (OMIM: 602538) CUGBP Elav-like family mem (490 aa)
initn: 3181 init1: 3181 opt: 3181 Z-score: 2120.7 bits: 401.9 E(85289): 2.2e-111
Smith-Waterman score: 3181; 100.0% identity (100.0% similar) in 490 aa overlap (1-490:1-490)
10 20 30 40 50 60
pF1KE2 MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 IVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 AFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 NSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 ILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQL
430 440 450 460 470 480
490
pF1KE2 KRSKNDSKPY
::::::::::
NP_001 KRSKNDSKPY
490
>>XP_016871042 (OMIM: 602538) PREDICTED: CUGBP Elav-like (490 aa)
initn: 3181 init1: 3181 opt: 3181 Z-score: 2120.7 bits: 401.9 E(85289): 2.2e-111
Smith-Waterman score: 3181; 100.0% identity (100.0% similar) in 490 aa overlap (1-490:1-490)
10 20 30 40 50 60
pF1KE2 MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 IVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 AFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 NSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 ILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQL
430 440 450 460 470 480
490
pF1KE2 KRSKNDSKPY
::::::::::
XP_016 KRSKNDSKPY
490
>>NP_001313257 (OMIM: 602538) CUGBP Elav-like family mem (490 aa)
initn: 3181 init1: 3181 opt: 3181 Z-score: 2120.7 bits: 401.9 E(85289): 2.2e-111
Smith-Waterman score: 3181; 100.0% identity (100.0% similar) in 490 aa overlap (1-490:1-490)
10 20 30 40 50 60
pF1KE2 MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 IVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 AFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 NSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 ILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQL
430 440 450 460 470 480
490
pF1KE2 KRSKNDSKPY
::::::::::
NP_001 KRSKNDSKPY
490
>>NP_001313253 (OMIM: 602538) CUGBP Elav-like family mem (490 aa)
initn: 3181 init1: 3181 opt: 3181 Z-score: 2120.7 bits: 401.9 E(85289): 2.2e-111
Smith-Waterman score: 3181; 100.0% identity (100.0% similar) in 490 aa overlap (1-490:1-490)
10 20 30 40 50 60
pF1KE2 MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 IVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 AFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 NSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 ILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQL
430 440 450 460 470 480
490
pF1KE2 KRSKNDSKPY
::::::::::
NP_001 KRSKNDSKPY
490
>>NP_001313247 (OMIM: 602538) CUGBP Elav-like family mem (490 aa)
initn: 3181 init1: 3181 opt: 3181 Z-score: 2120.7 bits: 401.9 E(85289): 2.2e-111
Smith-Waterman score: 3181; 100.0% identity (100.0% similar) in 490 aa overlap (1-490:1-490)
10 20 30 40 50 60
pF1KE2 MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 IVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 AFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 NSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 ILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQL
430 440 450 460 470 480
490
pF1KE2 KRSKNDSKPY
::::::::::
NP_001 KRSKNDSKPY
490
>>NP_001313249 (OMIM: 602538) CUGBP Elav-like family mem (490 aa)
initn: 3181 init1: 3181 opt: 3181 Z-score: 2120.7 bits: 401.9 E(85289): 2.2e-111
Smith-Waterman score: 3181; 100.0% identity (100.0% similar) in 490 aa overlap (1-490:1-490)
10 20 30 40 50 60
pF1KE2 MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 IVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 AFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 NSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 ILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQL
430 440 450 460 470 480
490
pF1KE2 KRSKNDSKPY
::::::::::
NP_001 KRSKNDSKPY
490
>>NP_001020247 (OMIM: 602538) CUGBP Elav-like family mem (490 aa)
initn: 3181 init1: 3181 opt: 3181 Z-score: 2120.7 bits: 401.9 E(85289): 2.2e-111
Smith-Waterman score: 3181; 100.0% identity (100.0% similar) in 490 aa overlap (1-490:1-490)
10 20 30 40 50 60
pF1KE2 MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 IVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 AFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 NSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 ILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQL
430 440 450 460 470 480
490
pF1KE2 KRSKNDSKPY
::::::::::
NP_001 KRSKNDSKPY
490
>>NP_001313278 (OMIM: 602538) CUGBP Elav-like family mem (490 aa)
initn: 3181 init1: 3181 opt: 3181 Z-score: 2120.7 bits: 401.9 E(85289): 2.2e-111
Smith-Waterman score: 3181; 100.0% identity (100.0% similar) in 490 aa overlap (1-490:1-490)
10 20 30 40 50 60
pF1KE2 MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 IVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 AFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 NSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 ILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQL
430 440 450 460 470 480
490
pF1KE2 KRSKNDSKPY
::::::::::
NP_001 KRSKNDSKPY
490
490 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 11:08:37 2016 done: Sun Nov 6 11:08:38 2016
Total Scan time: 8.940 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]