Result of FASTA (ccds) for
pF1KE2359
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2359, 387 aa
1>>>pF1KE2359 387 - 387 aa - 387 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6360+/-0.00103; mu= 14.8172+/- 0.061
mean_var=150.9625+/-61.619, 0's: 0 Z-trim(104.6): 317 B-trim: 992 in 2/47
Lambda= 0.104385
statistics sampled from 7478 (7987) to 7478 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.596), E-opt: 0.2 (0.245), width: 16
Scan time: 2.330
The best scores are: opt bits E(32554)
CCDS34270.1 HTR4 gene_id:3360|Hs108|chr5 ( 387) 2628 408.5 5.1e-114
CCDS4291.1 HTR4 gene_id:3360|Hs108|chr5 ( 388) 2433 379.2 3.5e-105
CCDS34273.2 HTR4 gene_id:3360|Hs108|chr5 ( 360) 2431 378.8 4.2e-105
CCDS34272.1 HTR4 gene_id:3360|Hs108|chr5 ( 428) 2428 378.5 6.3e-105
CCDS34271.1 HTR4 gene_id:3360|Hs108|chr5 ( 378) 2420 377.2 1.4e-104
CCDS75353.1 HTR4 gene_id:3360|Hs108|chr5 ( 411) 2420 377.2 1.4e-104
CCDS4292.1 ADRB2 gene_id:154|Hs108|chr5 ( 413) 705 119.0 8e-27
CCDS6052.1 ADRA1A gene_id:148|Hs108|chr8 ( 429) 548 95.4 1.1e-19
CCDS6053.1 ADRA1A gene_id:148|Hs108|chr8 ( 455) 548 95.4 1.1e-19
CCDS6054.1 ADRA1A gene_id:148|Hs108|chr8 ( 466) 548 95.4 1.1e-19
CCDS34869.1 ADRA1A gene_id:148|Hs108|chr8 ( 475) 548 95.4 1.1e-19
CCDS197.1 HTR6 gene_id:3362|Hs108|chr1 ( 440) 543 94.6 1.8e-19
CCDS4395.1 HRH2 gene_id:3274|Hs108|chr5 ( 359) 520 91.0 1.8e-18
CCDS47344.1 HRH2 gene_id:3274|Hs108|chr5 ( 397) 520 91.1 1.9e-18
CCDS4393.1 DRD1 gene_id:1812|Hs108|chr5 ( 446) 520 91.2 2e-18
CCDS7586.1 ADRB1 gene_id:153|Hs108|chr10 ( 477) 486 86.1 7.4e-17
CCDS7410.1 HTR7 gene_id:3363|Hs108|chr10 ( 432) 469 83.5 4.1e-16
CCDS7409.1 HTR7 gene_id:3363|Hs108|chr10 ( 445) 469 83.5 4.2e-16
CCDS7408.1 HTR7 gene_id:3363|Hs108|chr10 ( 479) 469 83.5 4.4e-16
CCDS83269.1 ADRA1A gene_id:148|Hs108|chr8 ( 342) 448 80.2 3.2e-15
CCDS5936.1 HTR5A gene_id:3361|Hs108|chr7 ( 357) 446 79.9 4e-15
CCDS6099.1 ADRB3 gene_id:155|Hs108|chr8 ( 408) 440 79.1 8.2e-15
CCDS75520.1 TAAR9 gene_id:134860|Hs108|chr6 ( 348) 421 76.1 5.4e-14
CCDS1268.1 GPR161 gene_id:23432|Hs108|chr1 ( 529) 422 76.5 6.2e-14
CCDS72978.1 GPR161 gene_id:23432|Hs108|chr1 ( 546) 422 76.5 6.4e-14
CCDS58043.1 GPR161 gene_id:23432|Hs108|chr1 ( 549) 422 76.5 6.4e-14
CCDS5155.1 TAAR6 gene_id:319100|Hs108|chr6 ( 345) 418 75.6 7.4e-14
CCDS34168.1 HTR1A gene_id:3350|Hs108|chr5 ( 422) 409 74.4 2.1e-13
CCDS5154.1 TAAR8 gene_id:83551|Hs108|chr6 ( 342) 405 73.7 2.8e-13
CCDS5156.1 TAAR5 gene_id:9038|Hs108|chr6 ( 337) 395 72.2 8e-13
CCDS3405.1 DRD5 gene_id:1816|Hs108|chr4 ( 477) 396 72.5 8.9e-13
CCDS5036.1 GPR63 gene_id:81491|Hs108|chr6 ( 419) 381 70.2 3.9e-12
CCDS13079.1 ADRA1D gene_id:146|Hs108|chr20 ( 572) 371 68.9 1.3e-11
CCDS2920.1 HTR1F gene_id:3355|Hs108|chr3 ( 366) 366 67.8 1.7e-11
CCDS7569.2 ADRA2A gene_id:150|Hs108|chr10 ( 465) 365 67.8 2.2e-11
CCDS47004.1 ADRA2C gene_id:152|Hs108|chr4 ( 462) 356 66.5 5.7e-11
CCDS2066.1 GPR45 gene_id:11250|Hs108|chr2 ( 372) 353 65.9 6.8e-11
CCDS4347.1 ADRA1B gene_id:147|Hs108|chr5 ( 520) 352 65.9 9.2e-11
>>CCDS34270.1 HTR4 gene_id:3360|Hs108|chr5 (387 aa)
initn: 2628 init1: 2628 opt: 2628 Z-score: 2160.5 bits: 408.5 E(32554): 5.1e-114
Smith-Waterman score: 2628; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:1-387)
10 20 30 40 50 60
pF1KE2 MDKLDANVSSEEGFGSVEKVVLLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MDKLDANVSSEEGFGSVEKVVLLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 SLAFADLLVSVLVMPFGAIELVQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 SLAFADLLVSVLVMPFGAIELVQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 AICCQPLVYRNKMTPLRIALMLGGCWVIPTFISFLPIMQGWNNIGIIDLIEKRKFNQNSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 AICCQPLVYRNKMTPLRIALMLGGCWVIPTFISFLPIMQGWNNIGIIDLIEKRKFNQNSN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 STYCVFMVNKPYAITCSVVAFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 STYCVFMVNKPYAITCSVVAFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 QSADQHSTHRMRTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 QSADQHSTHRMRTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 GYINSGLNPFLYAFLNKSFRRAFLIILCCDDERYRRPSILGQTVPCSTTTINGSTHVLRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 GYINSGLNPFLYAFLNKSFRRAFLIILCCDDERYRRPSILGQTVPCSTTTINGSTHVLRY
310 320 330 340 350 360
370 380
pF1KE2 TVLHRGHHQELEKLPIHNDPESLESCF
:::::::::::::::::::::::::::
CCDS34 TVLHRGHHQELEKLPIHNDPESLESCF
370 380
>>CCDS4291.1 HTR4 gene_id:3360|Hs108|chr5 (388 aa)
initn: 2451 init1: 2429 opt: 2433 Z-score: 2001.7 bits: 379.2 E(32554): 3.5e-105
Smith-Waterman score: 2433; 95.8% identity (97.4% similar) in 380 aa overlap (1-380:1-379)
10 20 30 40 50 60
pF1KE2 MDKLDANVSSEEGFGSVEKVVLLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MDKLDANVSSEEGFGSVEKVVLLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 SLAFADLLVSVLVMPFGAIELVQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SLAFADLLVSVLVMPFGAIELVQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 AICCQPLVYRNKMTPLRIALMLGGCWVIPTFISFLPIMQGWNNIGIIDLIEKRKFNQNSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 AICCQPLVYRNKMTPLRIALMLGGCWVIPTFISFLPIMQGWNNIGIIDLIEKRKFNQNSN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 STYCVFMVNKPYAITCSVVAFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 STYCVFMVNKPYAITCSVVAFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 QSADQHSTHRMRTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 QSADQHSTHRMRTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 GYINSGLNPFLYAFLNKSFRRAFLIILCCDDERYRRPSILGQTVPCSTTTINGSTHVLRY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GYINSGLNPFLYAFLNKSFRRAFLIILCCDDERYRRPSILGQTVPCSTTTINGSTHVLRD
310 320 330 340 350 360
370 380
pF1KE2 TVLHRGHHQELEKLPIHNDPESLESCF
.: . : . : . : ..:
CCDS42 AV-ECGGQWESQCHPPATSPLVAAQPSDT
370 380
>>CCDS34273.2 HTR4 gene_id:3360|Hs108|chr5 (360 aa)
initn: 2453 init1: 2431 opt: 2431 Z-score: 2000.5 bits: 378.8 E(32554): 4.2e-105
Smith-Waterman score: 2431; 99.7% identity (100.0% similar) in 360 aa overlap (1-360:1-360)
10 20 30 40 50 60
pF1KE2 MDKLDANVSSEEGFGSVEKVVLLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MDKLDANVSSEEGFGSVEKVVLLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 SLAFADLLVSVLVMPFGAIELVQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 SLAFADLLVSVLVMPFGAIELVQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 AICCQPLVYRNKMTPLRIALMLGGCWVIPTFISFLPIMQGWNNIGIIDLIEKRKFNQNSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 AICCQPLVYRNKMTPLRIALMLGGCWVIPTFISFLPIMQGWNNIGIIDLIEKRKFNQNSN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 STYCVFMVNKPYAITCSVVAFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 STYCVFMVNKPYAITCSVVAFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 QSADQHSTHRMRTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 QSADQHSTHRMRTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 GYINSGLNPFLYAFLNKSFRRAFLIILCCDDERYRRPSILGQTVPCSTTTINGSTHVLRY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS34 GYINSGLNPFLYAFLNKSFRRAFLIILCCDDERYRRPSILGQTVPCSTTTINGSTHVLRF
310 320 330 340 350 360
370 380
pF1KE2 TVLHRGHHQELEKLPIHNDPESLESCF
>>CCDS34272.1 HTR4 gene_id:3360|Hs108|chr5 (428 aa)
initn: 2450 init1: 2428 opt: 2428 Z-score: 1997.2 bits: 378.5 E(32554): 6.3e-105
Smith-Waterman score: 2428; 99.2% identity (99.2% similar) in 363 aa overlap (1-363:1-363)
10 20 30 40 50 60
pF1KE2 MDKLDANVSSEEGFGSVEKVVLLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MDKLDANVSSEEGFGSVEKVVLLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 SLAFADLLVSVLVMPFGAIELVQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 SLAFADLLVSVLVMPFGAIELVQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 AICCQPLVYRNKMTPLRIALMLGGCWVIPTFISFLPIMQGWNNIGIIDLIEKRKFNQNSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 AICCQPLVYRNKMTPLRIALMLGGCWVIPTFISFLPIMQGWNNIGIIDLIEKRKFNQNSN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 STYCVFMVNKPYAITCSVVAFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 STYCVFMVNKPYAITCSVVAFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 QSADQHSTHRMRTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 QSADQHSTHRMRTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 GYINSGLNPFLYAFLNKSFRRAFLIILCCDDERYRRPSILGQTVPCSTTTINGSTHVLRY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 GYINSGLNPFLYAFLNKSFRRAFLIILCCDDERYRRPSILGQTVPCSTTTINGSTHVLRT
310 320 330 340 350 360
370 380
pF1KE2 TVLHRGHHQELEKLPIHNDPESLESCF
:
CCDS34 DFLFDRDILARYWTKPARAGPFSGTLSIRCLTARKPVLGDAVECGGQWESQCHPPATSPL
370 380 390 400 410 420
>>CCDS34271.1 HTR4 gene_id:3360|Hs108|chr5 (378 aa)
initn: 2420 init1: 2420 opt: 2420 Z-score: 1991.3 bits: 377.2 E(32554): 1.4e-104
Smith-Waterman score: 2420; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KE2 MDKLDANVSSEEGFGSVEKVVLLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MDKLDANVSSEEGFGSVEKVVLLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 SLAFADLLVSVLVMPFGAIELVQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 SLAFADLLVSVLVMPFGAIELVQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 AICCQPLVYRNKMTPLRIALMLGGCWVIPTFISFLPIMQGWNNIGIIDLIEKRKFNQNSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 AICCQPLVYRNKMTPLRIALMLGGCWVIPTFISFLPIMQGWNNIGIIDLIEKRKFNQNSN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 STYCVFMVNKPYAITCSVVAFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 STYCVFMVNKPYAITCSVVAFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 QSADQHSTHRMRTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 QSADQHSTHRMRTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 GYINSGLNPFLYAFLNKSFRRAFLIILCCDDERYRRPSILGQTVPCSTTTINGSTHVLRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 GYINSGLNPFLYAFLNKSFRRAFLIILCCDDERYRRPSILGQTVPCSTTTINGSTHVLSG
310 320 330 340 350 360
370 380
pF1KE2 TVLHRGHHQELEKLPIHNDPESLESCF
CCDS34 CSPVSSFLLLFCNRPVPV
370
>>CCDS75353.1 HTR4 gene_id:3360|Hs108|chr5 (411 aa)
initn: 2420 init1: 2420 opt: 2420 Z-score: 1990.9 bits: 377.2 E(32554): 1.4e-104
Smith-Waterman score: 2420; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KE2 MDKLDANVSSEEGFGSVEKVVLLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 MDKLDANVSSEEGFGSVEKVVLLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 SLAFADLLVSVLVMPFGAIELVQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 SLAFADLLVSVLVMPFGAIELVQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 AICCQPLVYRNKMTPLRIALMLGGCWVIPTFISFLPIMQGWNNIGIIDLIEKRKFNQNSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 AICCQPLVYRNKMTPLRIALMLGGCWVIPTFISFLPIMQGWNNIGIIDLIEKRKFNQNSN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 STYCVFMVNKPYAITCSVVAFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 STYCVFMVNKPYAITCSVVAFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 QSADQHSTHRMRTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 QSADQHSTHRMRTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 GYINSGLNPFLYAFLNKSFRRAFLIILCCDDERYRRPSILGQTVPCSTTTINGSTHVLRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 GYINSGLNPFLYAFLNKSFRRAFLIILCCDDERYRRPSILGQTVPCSTTTINGSTHVLSS
310 320 330 340 350 360
370 380
pF1KE2 TVLHRGHHQELEKLPIHNDPESLESCF
CCDS75 GTETDRKKLWNKEEKIDQTIQMPKRKRKKKASLSYEDLILLGRKSCFREGK
370 380 390 400 410
>>CCDS4292.1 ADRB2 gene_id:154|Hs108|chr5 (413 aa)
initn: 589 init1: 254 opt: 705 Z-score: 595.1 bits: 119.0 E(32554): 8e-27
Smith-Waterman score: 708; 35.5% identity (63.7% similar) in 377 aa overlap (5-373:21-372)
10 20 30 40
pF1KE2 MDKLDANVSSEEGFGSVEKVVLLTFLSTVILMAILGNLLVMVAV
: .:..:. : : . .: ..: ..::.::..:.
CCDS42 MGQPGNGSAFLLAPNGSHAPDHDVTQERD--EVWVVGMGIVMSLIVLAIVFGNVLVITAI
10 20 30 40 50
50 60 70 80 90 100
pF1KE2 CWDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIELVQDIWIYGEVFCLVRTSLDVLLT
..:. . :::::.::: :::.... :.:::: .... .: .:. .: ::.::: .
CCDS42 AKFERLQTV-TNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCV
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE2 TASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIALMLGGCWVIPTFISFLPIMQGWNNI
:::: :: :..:::.:: .:. :.. .: . ... :.. . :::::.. :
CCDS42 TASIETLCVIAVDRYFAIT-SPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRA
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE2 GIIDLIEKRKFNQNSNSTYCVFMVNKPYAITCSVVAFYIPFLLMVLAYYRIYVTAKEHAH
... .: .: : : :..:. :::. :.:.::.:...::..: :.. ::.. .
CCDS42 -----THQEAINCYANETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQ
180 190 200 210 220 230
230 240 250 260 270
pF1KE2 QIQMLQ-RAGASSESRPQSADQHSTHRMRT-------ETKAAKTLCIIMGCFCLCWAPFF
.:. . : ... :. .. : .. : .: : :: ::: :::: : ::: :::
CCDS42 KIDKSEGRFHVQNLSQVEQ-DGRTGHGLRRSSKFCLKEHKALKTLGIIMGTFTLCWLPFF
240 250 260 270 280 290
280 290 300 310 320 330
pF1KE2 VTNIVDPFIDYTVPGQVWTAFLWLGYINSGLNPFLYAFLNKSFRRAFLIILCCDDERYRR
..::: . : . .:. . :.::.:::.::..: . .:: :: .:: ::
CCDS42 IVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLC-----LRR
300 310 320 330 340
340 350 360 370 380
pF1KE2 PSILGQTVPCSTTTINGSTHVLRYTVLHRGHHQELEKLPIHNDPESLESCF
:. . :. ::.: . :.: : ::
CCDS42 SSLKAYGNGYSS---NGNTGE------QSGYHVEQEKENKLLCEDLPGTEDFVGHQGTVP
350 360 370 380 390
CCDS42 SDNIDSQGRNCSTNDSLL
400 410
>>CCDS6052.1 ADRA1A gene_id:148|Hs108|chr8 (429 aa)
initn: 541 init1: 212 opt: 548 Z-score: 467.1 bits: 95.4 E(32554): 1.1e-19
Smith-Waterman score: 598; 32.2% identity (61.2% similar) in 363 aa overlap (16-353:22-369)
10 20 30 40 50
pF1KE2 MDKLDANVSSEEGFGSVEKVVLL-TFLSTVILMAILGNLLVMVAVCWDRQLRKI
.. :..:: ..:. .::...:::.::...: :.:...
CCDS60 MVFLSGNASDSSNCTQPPAPVNISKAILLGVILGGLILFGVLGNILVILSVACHRHLHSV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 KTNYFIVSLAFADLLVSVLVMPFGAIELVQDIWIYGEVFCLVRTSLDVLLTTASIFHLCC
:.:.::.:: ::::.. :.::.:: : : .:.::: . ...::: ::::. ::
CCDS60 -THYYIVNLAVADLLLTSTVLPFSAIFEVLGYWAFGRVFCNIWAAVDVLCCTASIMGLCI
70 80 90 100 110
120 130 140 150 160 170
pF1KE2 ISLDRYYAICCQPLVYRNKMTPLRIALMLGGCWVIPTFISFLPIMQGWNNIGIIDLIEKR
::.::: .. :: : . .: : . : :.. ::. :.. :: . . :
CCDS60 ISIDRYIGVS-YPLRYPTIVTQRRGLMALLCVWALSLVISIGPLF-GWRQPAPED-----
120 130 140 150 160 170
180 190 200 210 220
pF1KE2 KFNQNSNSTYCVFMVNKPYAITCSVVAFYIPFLLMVLAYYRIYVTAKEHAH---------
: : . . :.. .. .::.:. .... : :.::.::....
CCDS60 -------ETICQINEEPGYVLFSALGSFYLPLAIILVMYCRVYVVAKRESRGLKSGLKTD
180 190 200 210 220
230 240 250 260 270
pF1KE2 -----QIQM-LQRAGASSESRPQSADQHSTH------RMRTETKAAKTLCIIMGCFCLCW
:. . ..: .: . . ... . .:: .. : :::::: :..::: :::
CCDS60 KSDSEQVTLRIHRKNAPAGGSGMASAKTKTHFSVRLLKFSREKKAAKTLGIVVGCFVLCW
230 240 250 260 270 280
280 290 300 310 320
pF1KE2 APFFVTNIVDPFIDYTVPGQ-VWTAFLWLGYINSGLNPFLYAFLNKSFRRAFLIIL--CC
:::.. . :. :.. :. .::::.:: .::..: .. :..:: .: :
CCDS60 LPFFLVMPIGSFFPDFKPSETVFKIVFWLGYLNSCINPIIYPCSSQEFKKAFQNVLRIQC
290 300 310 320 330 340
330 340 350 360 370 380
pF1KE2 DDERYRRPSILGQTVPCSTTTINGSTHVLRYTVLHRGHHQELEKLPIHNDPESLESCF
.. :: :. . ...:
CCDS60 LCRKQSSKHALGYTLHPPSQAVEGQHKDMVRIPVGSRETFYRISKTDGVCEWKFFSSMPR
350 360 370 380 390 400
>>CCDS6053.1 ADRA1A gene_id:148|Hs108|chr8 (455 aa)
initn: 541 init1: 212 opt: 548 Z-score: 466.8 bits: 95.4 E(32554): 1.1e-19
Smith-Waterman score: 598; 32.2% identity (61.2% similar) in 363 aa overlap (16-353:22-369)
10 20 30 40 50
pF1KE2 MDKLDANVSSEEGFGSVEKVVLL-TFLSTVILMAILGNLLVMVAVCWDRQLRKI
.. :..:: ..:. .::...:::.::...: :.:...
CCDS60 MVFLSGNASDSSNCTQPPAPVNISKAILLGVILGGLILFGVLGNILVILSVACHRHLHSV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 KTNYFIVSLAFADLLVSVLVMPFGAIELVQDIWIYGEVFCLVRTSLDVLLTTASIFHLCC
:.:.::.:: ::::.. :.::.:: : : .:.::: . ...::: ::::. ::
CCDS60 -THYYIVNLAVADLLLTSTVLPFSAIFEVLGYWAFGRVFCNIWAAVDVLCCTASIMGLCI
70 80 90 100 110
120 130 140 150 160 170
pF1KE2 ISLDRYYAICCQPLVYRNKMTPLRIALMLGGCWVIPTFISFLPIMQGWNNIGIIDLIEKR
::.::: .. :: : . .: : . : :.. ::. :.. :: . . :
CCDS60 ISIDRYIGVS-YPLRYPTIVTQRRGLMALLCVWALSLVISIGPLF-GWRQPAPED-----
120 130 140 150 160 170
180 190 200 210 220
pF1KE2 KFNQNSNSTYCVFMVNKPYAITCSVVAFYIPFLLMVLAYYRIYVTAKEHAH---------
: : . . :.. .. .::.:. .... : :.::.::....
CCDS60 -------ETICQINEEPGYVLFSALGSFYLPLAIILVMYCRVYVVAKRESRGLKSGLKTD
180 190 200 210 220
230 240 250 260 270
pF1KE2 -----QIQM-LQRAGASSESRPQSADQHSTH------RMRTETKAAKTLCIIMGCFCLCW
:. . ..: .: . . ... . .:: .. : :::::: :..::: :::
CCDS60 KSDSEQVTLRIHRKNAPAGGSGMASAKTKTHFSVRLLKFSREKKAAKTLGIVVGCFVLCW
230 240 250 260 270 280
280 290 300 310 320
pF1KE2 APFFVTNIVDPFIDYTVPGQ-VWTAFLWLGYINSGLNPFLYAFLNKSFRRAFLIIL--CC
:::.. . :. :.. :. .::::.:: .::..: .. :..:: .: :
CCDS60 LPFFLVMPIGSFFPDFKPSETVFKIVFWLGYLNSCINPIIYPCSSQEFKKAFQNVLRIQC
290 300 310 320 330 340
330 340 350 360 370 380
pF1KE2 DDERYRRPSILGQTVPCSTTTINGSTHVLRYTVLHRGHHQELEKLPIHNDPESLESCF
.. :: :. . ...:
CCDS60 LCRKQSSKHALGYTLHPPSQAVEGQHKDMVRIPVGSRETFYRISKTDGVCEWKFFSSMPR
350 360 370 380 390 400
>>CCDS6054.1 ADRA1A gene_id:148|Hs108|chr8 (466 aa)
initn: 541 init1: 212 opt: 548 Z-score: 466.7 bits: 95.4 E(32554): 1.1e-19
Smith-Waterman score: 598; 32.2% identity (61.2% similar) in 363 aa overlap (16-353:22-369)
10 20 30 40 50
pF1KE2 MDKLDANVSSEEGFGSVEKVVLL-TFLSTVILMAILGNLLVMVAVCWDRQLRKI
.. :..:: ..:. .::...:::.::...: :.:...
CCDS60 MVFLSGNASDSSNCTQPPAPVNISKAILLGVILGGLILFGVLGNILVILSVACHRHLHSV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 KTNYFIVSLAFADLLVSVLVMPFGAIELVQDIWIYGEVFCLVRTSLDVLLTTASIFHLCC
:.:.::.:: ::::.. :.::.:: : : .:.::: . ...::: ::::. ::
CCDS60 -THYYIVNLAVADLLLTSTVLPFSAIFEVLGYWAFGRVFCNIWAAVDVLCCTASIMGLCI
70 80 90 100 110
120 130 140 150 160 170
pF1KE2 ISLDRYYAICCQPLVYRNKMTPLRIALMLGGCWVIPTFISFLPIMQGWNNIGIIDLIEKR
::.::: .. :: : . .: : . : :.. ::. :.. :: . . :
CCDS60 ISIDRYIGVS-YPLRYPTIVTQRRGLMALLCVWALSLVISIGPLF-GWRQPAPED-----
120 130 140 150 160 170
180 190 200 210 220
pF1KE2 KFNQNSNSTYCVFMVNKPYAITCSVVAFYIPFLLMVLAYYRIYVTAKEHAH---------
: : . . :.. .. .::.:. .... : :.::.::....
CCDS60 -------ETICQINEEPGYVLFSALGSFYLPLAIILVMYCRVYVVAKRESRGLKSGLKTD
180 190 200 210 220
230 240 250 260 270
pF1KE2 -----QIQM-LQRAGASSESRPQSADQHSTH------RMRTETKAAKTLCIIMGCFCLCW
:. . ..: .: . . ... . .:: .. : :::::: :..::: :::
CCDS60 KSDSEQVTLRIHRKNAPAGGSGMASAKTKTHFSVRLLKFSREKKAAKTLGIVVGCFVLCW
230 240 250 260 270 280
280 290 300 310 320
pF1KE2 APFFVTNIVDPFIDYTVPGQ-VWTAFLWLGYINSGLNPFLYAFLNKSFRRAFLIIL--CC
:::.. . :. :.. :. .::::.:: .::..: .. :..:: .: :
CCDS60 LPFFLVMPIGSFFPDFKPSETVFKIVFWLGYLNSCINPIIYPCSSQEFKKAFQNVLRIQC
290 300 310 320 330 340
330 340 350 360 370 380
pF1KE2 DDERYRRPSILGQTVPCSTTTINGSTHVLRYTVLHRGHHQELEKLPIHNDPESLESCF
.. :: :. . ...:
CCDS60 LCRKQSSKHALGYTLHPPSQAVEGQHKDMVRIPVGSRETFYRISKTDGVCEWKFFSSMPR
350 360 370 380 390 400
387 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 17:06:05 2016 done: Sun Nov 6 17:06:05 2016
Total Scan time: 2.330 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]