FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE2351, 468 aa
  1>>>pF1KE2351 468 - 468 aa - 468 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5180+/-0.000836; mu= 16.4864+/- 0.050
 mean_var=67.8754+/-13.555, 0's: 0 Z-trim(106.8): 15  B-trim: 0 in 0/52
 Lambda= 0.155675
 statistics sampled from 9196 (9198) to 9196 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.661), E-opt: 0.2 (0.283), width:  16
 Scan time:  3.030

The best scores are:                                      opt bits E(32554)
CCDS9709.1 ERO1A gene_id:30001|Hs108|chr14         ( 468) 3236 735.9 2.2e-212
CCDS31064.1 ERO1B gene_id:56605|Hs108|chr1         ( 467) 2027 464.3 1.2e-130


>>CCDS9709.1 ERO1A gene_id:30001|Hs108|chr14              (468 aa)
 initn: 3236 init1: 3236 opt: 3236  Z-score: 3926.5  bits: 735.9 E(32554): 2.2e-212
Smith-Waterman score: 3236; 100.0% identity (100.0% similar) in 468 aa overlap (1-468:1-468)

               10        20        30        40        50        60
pF1KE2 MGRGWGFLFGLLGAVWLLSSGHGEEQPPETAAQRCFCQVSGYLDDCTCDVETIDRFNNYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 MGRGWGFLFGLLGAVWLLSSGHGEEQPPETAAQRCFCQVSGYLDDCTCDVETIDRFNNYR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 LFPRLQKLLESDYFRYYKVNLKRPCPFWNDISQCGRRDCAVKPCQSDEVPDGIKSASYKY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 LFPRLQKLLESDYFRYYKVNLKRPCPFWNDISQCGRRDCAVKPCQSDEVPDGIKSASYKY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 SEEANNLIEECEQAERLGAVDESLSEETQKAVLQWTKHDDSSDNFCEADDIQSPEAEYVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 SEEANNLIEECEQAERLGAVDESLSEETQKAVLQWTKHDDSSDNFCEADDIQSPEAEYVD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 LLLNPERYTGYKGPDAWKIWNVIYEENCFKPQTIKRPLNPLASGQGTSEENTFYSWLEGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 LLLNPERYTGYKGPDAWKIWNVIYEENCFKPQTIKRPLNPLASGQGTSEENTFYSWLEGL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 CVEKRAFYRLISGLHASINVHLSARYLLQETWLEKKWGHNITEFQQRFDGILTEGEGPRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 CVEKRAFYRLISGLHASINVHLSARYLLQETWLEKKWGHNITEFQQRFDGILTEGEGPRR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE2 LKNLYFLYLIELRALSKVLPFFERPDFQLFTGNKIQDEENKMLLLEILHEIKSFPLHFDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 LKNLYFLYLIELRALSKVLPFFERPDFQLFTGNKIQDEENKMLLLEILHEIKSFPLHFDE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE2 NSFFAGDKKEAHKLKEDFRLHFRNISRIMDCVGCFKCRLWGKLQTQGLGTALKILFSEKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 NSFFAGDKKEAHKLKEDFRLHFRNISRIMDCVGCFKCRLWGKLQTQGLGTALKILFSEKL
              370       380       390       400       410       420

              430       440       450       460        
pF1KE2 IANMPESGPSYEFHLTRQEIVSLFNAFGRISTSVKELENFRNLLQNIH
       ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 IANMPESGPSYEFHLTRQEIVSLFNAFGRISTSVKELENFRNLLQNIH
              430       440       450       460        

>>CCDS31064.1 ERO1B gene_id:56605|Hs108|chr1              (467 aa)
 initn: 2006 init1: 1624 opt: 2027  Z-score: 2459.0  bits: 464.3 E(32554): 1.2e-130
Smith-Waterman score: 2027; 64.8% identity (87.3% similar) in 432 aa overlap (38-466:34-465)

        10        20        30        40        50        60       
pF1KE2 LFGLLGAVWLLSSGHGEEQPPETAAQRCFCQVSGYLDDCTCDVETIDRFNNYRLFPRLQK
                                     ::.: :::: ::...:: ::.:..::...:
CCDS31 GVRRAGAGQGVAAAVQLLVTLSFLRSVVEAQVTGVLDDCLCDIDSIDNFNTYKIFPKIKK
            10        20        30        40        50        60   

        70        80        90       100       110        120      
pF1KE2 LLESDYFRYYKVNLKRPCPFWNDISQCGRRDCAVKPCQSDEVPDGIKSA-SYKYSEEANN
       : : ::::::::::::::::: . ..:. .:: :.::  ...: :::.. : :: . :::
CCDS31 LQERDYFRYYKVNLKRPCPFWAEDGHCSIKDCHVEPCPESKIPVGIKAGHSNKYLKMANN
            70        80        90       100       110       120   

          130       140       150       160       170       180    
pF1KE2 L--IEECEQAERLGAVDESLSEETQKAVLQWTKHDDSSDNFCEADDIQSPEAEYVDLLLN
          .:.::::..:::.. .::.....: ..:...::: :.::: :: .:: :.:::::::
CCDS31 TKELEDCEQANKLGAINSTLSNQSKEAFIDWARYDDSRDHFCELDDERSPAAQYVDLLLN
           130       140       150       160       170       180   

          190       200       210       220       230       240    
pF1KE2 PERYTGYKGPDAWKIWNVIYEENCFKPQTIKRPLNPLASGQGTSEENTFYSWLEGLCVEK
       ::::::::: .::..:: :::::::::... ::::::: ..: .. ..::.::::::.::
CCDS31 PERYTGYKGTSAWRVWNSIYEENCFKPRSVYRPLNPLAPSRGEDDGESFYTWLEGLCLEK
           190       200       210       220       230       240   

          250       260       270       280       290       300    
pF1KE2 RAFYRLISGLHASINVHLSARYLLQETWLEKKWGHNITEFQQRFDGILTEGEGPRRLKNL
       :.::.::::::::::.:: : :::.::: . .:: :: ::..::: . :.::::::::::
CCDS31 RVFYKLISGLHASINLHLCANYLLEETWGKPSWGPNIKEFKHRFDPVETKGEGPRRLKNL
           250       260       270       280       290       300   

          310       320       330       340       350       360    
pF1KE2 YFLYLIELRALSKVLPFFERPDFQLFTGNKIQDEENKMLLLEILHEIKSFPLHFDENSFF
       :::::::::::::: :.:::   .:.:::  .: ..: :::.:... ::::.::::.:.:
CCDS31 YFLYLIELRALSKVAPYFERSIVDLYTGNAEEDADTKTLLLNIFQDTKSFPMHFDEKSMF
           310       320       330       340       350       360   

          370       380       390       400       410       420    
pF1KE2 AGDKKEAHKLKEDFRLHFRNISRIMDCVGCFKCRLWGKLQTQGLGTALKILFSEKLIANM
       ::::: :..:::.:::::.::::::::::: :::::::::::::::::::::::: : ..
CCDS31 AGDKKGAKSLKEEFRLHFKNISRIMDCVGCDKCRLWGKLQTQGLGTALKILFSEKEIQKL
           370       380       390       400       410       420   

          430       440       450       460        
pF1KE2 PESGPSYEFHLTRQEIVSLFNAFGRISTSVKELENFRNLLQNIH
       ::..::  :.:::::::.:.:::::.:::...:.::. :::.  
CCDS31 PENSPSKGFQLTRQEIVALLNAFGRLSTSIRDLQNFKVLLQHSR
           430       440       450       460       




468 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 14:25:38 2016 done: Sun Nov  6 14:25:39 2016
 Total Scan time:  3.030 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]