Result of FASTA (ccds) for
pF1KE2300
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2300, 857 aa
1>>>pF1KE2300 857 - 857 aa - 857 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.9726+/-0.00134; mu= -12.8422+/- 0.077
mean_var=406.6651+/-95.220, 0's: 0 Z-trim(106.3): 288 B-trim: 0 in 0/51
Lambda= 0.063600
statistics sampled from 8601 (8888) to 8601 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.624), E-opt: 0.2 (0.273), width: 16
Scan time: 4.400
The best scores are: opt bits E(32554)
CCDS4993.1 TTK gene_id:7272|Hs108|chr6 ( 857) 5664 535.7 1.4e-151
CCDS55040.1 TTK gene_id:7272|Hs108|chr6 ( 856) 5645 533.9 4.5e-151
>>CCDS4993.1 TTK gene_id:7272|Hs108|chr6 (857 aa)
initn: 5664 init1: 5664 opt: 5664 Z-score: 2835.1 bits: 535.7 E(32554): 1.4e-151
Smith-Waterman score: 5664; 100.0% identity (100.0% similar) in 857 aa overlap (1-857:1-857)
10 20 30 40 50 60
pF1KE2 MESEDLSGRELTIDSIMNKVRDIKNKFKNEDLTDELSLNKISADTTDNSGTVNQIMMMAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 MESEDLSGRELTIDSIMNKVRDIKNKFKNEDLTDELSLNKISADTTDNSGTVNQIMMMAN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 NPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 AIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 AIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEML
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 EIALRNLNLQKKQLLSEEEKKNLSASTVLTAQESFSGSLGHLQNRNNSCDSRGQTTKARF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 EIALRNLNLQKKQLLSEEEKKNLSASTVLTAQESFSGSLGHLQNRNNSCDSRGQTTKARF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 LYGENMPPQDAEIGYRNSLRQTNKTKQSCPFGRVPVNLLNSPDCDVKTDDSVVPCFMKRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 LYGENMPPQDAEIGYRNSLRQTNKTKQSCPFGRVPVNLLNSPDCDVKTDDSVVPCFMKRQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 TSRSECRDLVVPGSKPSGNDSCELRNLKSVQNSHFKEPLVSDEKSSELIITDSITLKNKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 TSRSECRDLVVPGSKPSGNDSCELRNLKSVQNSHFKEPLVSDEKSSELIITDSITLKNKT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 ESSLLAKLEETKEYQEPEVPESNQKQWQSKRKSECINQNPAASSNHWQIPELARKVNTEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 ESSLLAKLEETKEYQEPEVPESNQKQWQSKRKSECINQNPAASSNHWQIPELARKVNTEQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 KHTTFEQPVFSVSKQSPPISTSKWFDPKSICKTPSSNTLDDYMSCFRTPVVKNDFPPACQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 KHTTFEQPVFSVSKQSPPISTSKWFDPKSICKTPSSNTLDDYMSCFRTPVVKNDFPPACQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 LSTPYGQPACFQQQQHQILATPLQNLQVLASSSANECISVKGRIYSILKQIGSGGSSKVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 LSTPYGQPACFQQQQHQILATPLQNLQVLASSSANECISVKGRIYSILKQIGSGGSSKVF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 VMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 VMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE2 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE2 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE2 SIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 SIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGE
790 800 810 820 830 840
850
pF1KE2 SHNSSSSKTFEKKRGKK
:::::::::::::::::
CCDS49 SHNSSSSKTFEKKRGKK
850
>>CCDS55040.1 TTK gene_id:7272|Hs108|chr6 (856 aa)
initn: 2936 init1: 2936 opt: 5645 Z-score: 2825.7 bits: 533.9 E(32554): 4.5e-151
Smith-Waterman score: 5645; 99.9% identity (99.9% similar) in 857 aa overlap (1-857:1-856)
10 20 30 40 50 60
pF1KE2 MESEDLSGRELTIDSIMNKVRDIKNKFKNEDLTDELSLNKISADTTDNSGTVNQIMMMAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MESEDLSGRELTIDSIMNKVRDIKNKFKNEDLTDELSLNKISADTTDNSGTVNQIMMMAN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 NPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 AIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEML
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 EIALRNLNLQKKQLLSEEEKKNLSASTVLTAQESFSGSLGHLQNRNNSCDSRGQTTKARF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EIALRNLNLQKKQLLSEEEKKNLSASTVLTAQESFSGSLGHLQNRNNSCDSRGQTTKARF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 LYGENMPPQDAEIGYRNSLRQTNKTKQSCPFGRVPVNLLNSPDCDVKTDDSVVPCFMKRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LYGENMPPQDAEIGYRNSLRQTNKTKQSCPFGRVPVNLLNSPDCDVKTDDSVVPCFMKRQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 TSRSECRDLVVPGSKPSGNDSCELRNLKSVQNSHFKEPLVSDEKSSELIITDSITLKNKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TSRSECRDLVVPGSKPSGNDSCELRNLKSVQNSHFKEPLVSDEKSSELIITDSITLKNKT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 ESSLLAKLEETKEYQEPEVPESNQKQWQSKRKSECINQNPAASSNHWQIPELARKVNTEQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ESSLLAKLEETKEYQEPEVPESNQKQWQSKRKSECINQNPAASSNHWQIPELARKVNTE-
370 380 390 400 410
430 440 450 460 470 480
pF1KE2 KHTTFEQPVFSVSKQSPPISTSKWFDPKSICKTPSSNTLDDYMSCFRTPVVKNDFPPACQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KHTTFEQPVFSVSKQSPPISTSKWFDPKSICKTPSSNTLDDYMSCFRTPVVKNDFPPACQ
420 430 440 450 460 470
490 500 510 520 530 540
pF1KE2 LSTPYGQPACFQQQQHQILATPLQNLQVLASSSANECISVKGRIYSILKQIGSGGSSKVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LSTPYGQPACFQQQQHQILATPLQNLQVLASSSANECISVKGRIYSILKQIGSGGSSKVF
480 490 500 510 520 530
550 560 570 580 590 600
pF1KE2 QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM
540 550 560 570 580 590
610 620 630 640 650 660
pF1KE2 VMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML
600 610 620 630 640 650
670 680 690 700 710 720
pF1KE2 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL
660 670 680 690 700 710
730 740 750 760 770 780
pF1KE2 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI
720 730 740 750 760 770
790 800 810 820 830 840
pF1KE2 SIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGE
780 790 800 810 820 830
850
pF1KE2 SHNSSSSKTFEKKRGKK
:::::::::::::::::
CCDS55 SHNSSSSKTFEKKRGKK
840 850
857 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 03:01:21 2016 done: Mon Nov 7 03:01:22 2016
Total Scan time: 4.400 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]