Result of FASTA (omim) for
pF1KE1068
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1068, 577 aa
1>>>pF1KE1068 577 - 577 aa - 577 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.4039+/-0.000444; mu= 0.8804+/- 0.028
mean_var=243.8104+/-50.226, 0's: 0 Z-trim(118.9): 18 B-trim: 396 in 1/53
Lambda= 0.082139
statistics sampled from 32239 (32257) to 32239 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.719), E-opt: 0.2 (0.378), width: 16
Scan time: 12.000
The best scores are: opt bits E(85289)
NP_065827 (OMIM: 616480) protein hinderin isoform ( 577) 3829 467.1 6.8e-131
XP_005258374 (OMIM: 616480) PREDICTED: protein hin ( 573) 3688 450.4 7.2e-126
XP_016881367 (OMIM: 616480) PREDICTED: protein hin ( 469) 3137 385.1 2.8e-106
XP_011524402 (OMIM: 616480) PREDICTED: protein hin ( 456) 2683 331.3 4.3e-90
XP_005258372 (OMIM: 616480) PREDICTED: protein hin ( 613) 2683 331.3 5.4e-90
XP_016881365 (OMIM: 616480) PREDICTED: protein hin ( 609) 2542 314.6 5.8e-85
XP_016881366 (OMIM: 616480) PREDICTED: protein hin ( 568) 2383 295.8 2.6e-79
XP_011524401 (OMIM: 616480) PREDICTED: protein hin ( 568) 2383 295.8 2.6e-79
XP_005258375 (OMIM: 616480) PREDICTED: protein hin ( 568) 2383 295.8 2.6e-79
NP_001309256 (OMIM: 616480) protein hinderin isofo ( 505) 1991 249.3 2.3e-65
XP_016881370 (OMIM: 616480) PREDICTED: protein hin ( 436) 1580 200.5 9.2e-51
XP_016881369 (OMIM: 616480) PREDICTED: protein hin ( 436) 1580 200.5 9.2e-51
XP_016881368 (OMIM: 616480) PREDICTED: protein hin ( 436) 1580 200.5 9.2e-51
>>NP_065827 (OMIM: 616480) protein hinderin isoform 1 [H (577 aa)
initn: 3829 init1: 3829 opt: 3829 Z-score: 2470.9 bits: 467.1 E(85289): 6.8e-131
Smith-Waterman score: 3829; 99.7% identity (100.0% similar) in 577 aa overlap (1-577:1-577)
10 20 30 40 50 60
pF1KE1 MADVAGPSRPSAAAFWSRDFSDEEQSVVYVPGISAEGNVRSRHKLMSPKADVKLKTSRVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MADVAGPSRPSAAAFWSRDFSDEEQSVVYVPGISAEGNVRSRHKLMSPKADVKLKTSRVT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DVSISMESLKGTGDSADEQNSCRGEIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTE
:.:::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
NP_065 DASISMESLKGTGDSVDEQNSCRGEIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 ERLKAEQESFEKKIRQLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 ERLKAEQESFEKKIRQLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 SELGAARMQEQQVSSRKSTLQCSSVELDGSYLSIARPQTYYQTKQRPKSAVQDSASESLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 SELGAARMQEQQVSSRKSTLQCSSVELDGSYLSIARPQTYYQTKQRPKSAVQDSASESLI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 AFRNNSLKPVTLHHPKDDLDKIPSETTTCNCESPGRKPAVPTEKMPQEELHMKECPHLKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 AFRNNSLKPVTLHHPKDDLDKIPSETTTCNCESPGRKPAVPTEKMPQEELHMKECPHLKP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 TPSQCCGHRLAADRVHDSHPTNMTPQHPKTHPESCSYCRLSWASLVHGGGALQPIETLKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 TPSQCCGHRLAADRVHDSHPTNMTPQHPKTHPESCSYCRLSWASLVHGGGALQPIETLKK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 QISEDRKQQLMLQKMELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYNCLLKSNCDGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 QISEDRKQQLMLQKMELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYNCLLKSNCDGW
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 LLGTSSSIKKHQDPPNSGENRKERKTVGFHSHMKDDAQWSCQKKDTCRPQRGTVTGVRKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LLGTSSSIKKHQDPPNSGENRKERKTVGFHSHMKDDAQWSCQKKDTCRPQRGTVTGVRKD
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE1 ASTSPMPTGSLKDFVTTASPSLQHTTSRYETSLLDLVQSLSPNSAPKPQRYPSREAGAWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 ASTSPMPTGSLKDFVTTASPSLQHTTSRYETSLLDLVQSLSPNSAPKPQRYPSREAGAWN
490 500 510 520 530 540
550 560 570
pF1KE1 HGTFRLSPLKSTRKKMGMHRTPEELEENQILEDIFFI
:::::::::::::::::::::::::::::::::::::
NP_065 HGTFRLSPLKSTRKKMGMHRTPEELEENQILEDIFFI
550 560 570
>>XP_005258374 (OMIM: 616480) PREDICTED: protein hinderi (573 aa)
initn: 3688 init1: 3688 opt: 3688 Z-score: 2380.7 bits: 450.4 E(85289): 7.2e-126
Smith-Waterman score: 3688; 99.6% identity (100.0% similar) in 557 aa overlap (21-577:17-573)
10 20 30 40 50 60
pF1KE1 MADVAGPSRPSAAAFWSRDFSDEEQSVVYVPGISAEGNVRSRHKLMSPKADVKLKTSRVT
::::::::::::::::::::::::::::::::::::::::
XP_005 MPDNIIVFSFMFSCVVSDEEQSVVYVPGISAEGNVRSRHKLMSPKADVKLKTSRVT
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 DVSISMESLKGTGDSADEQNSCRGEIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTE
:.:::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
XP_005 DASISMESLKGTGDSVDEQNSCRGEIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 ERLKAEQESFEKKIRQLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERLKAEQESFEKKIRQLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE1 SELGAARMQEQQVSSRKSTLQCSSVELDGSYLSIARPQTYYQTKQRPKSAVQDSASESLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SELGAARMQEQQVSSRKSTLQCSSVELDGSYLSIARPQTYYQTKQRPKSAVQDSASESLI
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE1 AFRNNSLKPVTLHHPKDDLDKIPSETTTCNCESPGRKPAVPTEKMPQEELHMKECPHLKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AFRNNSLKPVTLHHPKDDLDKIPSETTTCNCESPGRKPAVPTEKMPQEELHMKECPHLKP
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE1 TPSQCCGHRLAADRVHDSHPTNMTPQHPKTHPESCSYCRLSWASLVHGGGALQPIETLKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TPSQCCGHRLAADRVHDSHPTNMTPQHPKTHPESCSYCRLSWASLVHGGGALQPIETLKK
300 310 320 330 340 350
370 380 390 400 410 420
pF1KE1 QISEDRKQQLMLQKMELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYNCLLKSNCDGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QISEDRKQQLMLQKMELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYNCLLKSNCDGW
360 370 380 390 400 410
430 440 450 460 470 480
pF1KE1 LLGTSSSIKKHQDPPNSGENRKERKTVGFHSHMKDDAQWSCQKKDTCRPQRGTVTGVRKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLGTSSSIKKHQDPPNSGENRKERKTVGFHSHMKDDAQWSCQKKDTCRPQRGTVTGVRKD
420 430 440 450 460 470
490 500 510 520 530 540
pF1KE1 ASTSPMPTGSLKDFVTTASPSLQHTTSRYETSLLDLVQSLSPNSAPKPQRYPSREAGAWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ASTSPMPTGSLKDFVTTASPSLQHTTSRYETSLLDLVQSLSPNSAPKPQRYPSREAGAWN
480 490 500 510 520 530
550 560 570
pF1KE1 HGTFRLSPLKSTRKKMGMHRTPEELEENQILEDIFFI
:::::::::::::::::::::::::::::::::::::
XP_005 HGTFRLSPLKSTRKKMGMHRTPEELEENQILEDIFFI
540 550 560 570
>>XP_016881367 (OMIM: 616480) PREDICTED: protein hinderi (469 aa)
initn: 3137 init1: 3137 opt: 3137 Z-score: 2029.0 bits: 385.1 E(85289): 2.8e-106
Smith-Waterman score: 3137; 99.6% identity (99.8% similar) in 469 aa overlap (109-577:1-469)
80 90 100 110 120 130
pF1KE1 QNSCRGEIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTEERLKAEQESFEKKIRQLE
. ::::::::::::::::::::::::::::
XP_016 MNRVSEEKEVTEERLKAEQESFEKKIRQLE
10 20 30
140 150 160 170 180 190
pF1KE1 EQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSLSELGAARMQEQQVSSRKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSLSELGAARMQEQQVSSRKS
40 50 60 70 80 90
200 210 220 230 240 250
pF1KE1 TLQCSSVELDGSYLSIARPQTYYQTKQRPKSAVQDSASESLIAFRNNSLKPVTLHHPKDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLQCSSVELDGSYLSIARPQTYYQTKQRPKSAVQDSASESLIAFRNNSLKPVTLHHPKDD
100 110 120 130 140 150
260 270 280 290 300 310
pF1KE1 LDKIPSETTTCNCESPGRKPAVPTEKMPQEELHMKECPHLKPTPSQCCGHRLAADRVHDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDKIPSETTTCNCESPGRKPAVPTEKMPQEELHMKECPHLKPTPSQCCGHRLAADRVHDS
160 170 180 190 200 210
320 330 340 350 360 370
pF1KE1 HPTNMTPQHPKTHPESCSYCRLSWASLVHGGGALQPIETLKKQISEDRKQQLMLQKMELE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HPTNMTPQHPKTHPESCSYCRLSWASLVHGGGALQPIETLKKQISEDRKQQLMLQKMELE
220 230 240 250 260 270
380 390 400 410 420 430
pF1KE1 IEKERLQHLLAQQETKLLLKQQQLHQSRLDYNCLLKSNCDGWLLGTSSSIKKHQDPPNSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IEKERLQHLLAQQETKLLLKQQQLHQSRLDYNCLLKSNCDGWLLGTSSSIKKHQDPPNSG
280 290 300 310 320 330
440 450 460 470 480 490
pF1KE1 ENRKERKTVGFHSHMKDDAQWSCQKKDTCRPQRGTVTGVRKDASTSPMPTGSLKDFVTTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ENRKERKTVGFHSHMKDDAQWSCQKKDTCRPQRGTVTGVRKDASTSPMPTGSLKDFVTTA
340 350 360 370 380 390
500 510 520 530 540 550
pF1KE1 SPSLQHTTSRYETSLLDLVQSLSPNSAPKPQRYPSREAGAWNHGTFRLSPLKSTRKKMGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPSLQHTTSRYETSLLDLVQSLSPNSAPKPQRYPSREAGAWNHGTFRLSPLKSTRKKMGM
400 410 420 430 440 450
560 570
pF1KE1 HRTPEELEENQILEDIFFI
:::::::::::::::::::
XP_016 HRTPEELEENQILEDIFFI
460
>>XP_011524402 (OMIM: 616480) PREDICTED: protein hinderi (456 aa)
initn: 2683 init1: 2683 opt: 2683 Z-score: 1738.4 bits: 331.3 E(85289): 4.3e-90
Smith-Waterman score: 2683; 99.5% identity (100.0% similar) in 410 aa overlap (1-410:1-410)
10 20 30 40 50 60
pF1KE1 MADVAGPSRPSAAAFWSRDFSDEEQSVVYVPGISAEGNVRSRHKLMSPKADVKLKTSRVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MADVAGPSRPSAAAFWSRDFSDEEQSVVYVPGISAEGNVRSRHKLMSPKADVKLKTSRVT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DVSISMESLKGTGDSADEQNSCRGEIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTE
:.:::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
XP_011 DASISMESLKGTGDSVDEQNSCRGEIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 ERLKAEQESFEKKIRQLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERLKAEQESFEKKIRQLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 SELGAARMQEQQVSSRKSTLQCSSVELDGSYLSIARPQTYYQTKQRPKSAVQDSASESLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SELGAARMQEQQVSSRKSTLQCSSVELDGSYLSIARPQTYYQTKQRPKSAVQDSASESLI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 AFRNNSLKPVTLHHPKDDLDKIPSETTTCNCESPGRKPAVPTEKMPQEELHMKECPHLKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AFRNNSLKPVTLHHPKDDLDKIPSETTTCNCESPGRKPAVPTEKMPQEELHMKECPHLKP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 TPSQCCGHRLAADRVHDSHPTNMTPQHPKTHPESCSYCRLSWASLVHGGGALQPIETLKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPSQCCGHRLAADRVHDSHPTNMTPQHPKTHPESCSYCRLSWASLVHGGGALQPIETLKK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 QISEDRKQQLMLQKMELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYNCLLKSNCDGW
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QISEDRKQQLMLQKMELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYNWLKAQALFKS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 LLGTSSSIKKHQDPPNSGENRKERKTVGFHSHMKDDAQWSCQKKDTCRPQRGTVTGVRKD
XP_011 RELVAEKQLTKPQELKLDMNGSDSGPSSFIVVLSVY
430 440 450
>>XP_005258372 (OMIM: 616480) PREDICTED: protein hinderi (613 aa)
initn: 3802 init1: 2683 opt: 2683 Z-score: 1736.6 bits: 331.3 E(85289): 5.4e-90
Smith-Waterman score: 3707; 93.6% identity (93.9% similar) in 609 aa overlap (1-573:1-609)
10 20 30 40 50 60
pF1KE1 MADVAGPSRPSAAAFWSRDFSDEEQSVVYVPGISAEGNVRSRHKLMSPKADVKLKTSRVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MADVAGPSRPSAAAFWSRDFSDEEQSVVYVPGISAEGNVRSRHKLMSPKADVKLKTSRVT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DVSISMESLKGTGDSADEQNSCRGEIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTE
:.:::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
XP_005 DASISMESLKGTGDSVDEQNSCRGEIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 ERLKAEQESFEKKIRQLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERLKAEQESFEKKIRQLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 SELGAARMQEQQVSSRKSTLQCSSVELDGSYLSIARPQTYYQTKQRPKSAVQDSASESLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SELGAARMQEQQVSSRKSTLQCSSVELDGSYLSIARPQTYYQTKQRPKSAVQDSASESLI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 AFRNNSLKPVTLHHPKDDLDKIPSETTTCNCESPGRKPAVPTEKMPQEELHMKECPHLKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AFRNNSLKPVTLHHPKDDLDKIPSETTTCNCESPGRKPAVPTEKMPQEELHMKECPHLKP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 TPSQCCGHRLAADRVHDSHPTNMTPQHPKTHPESCSYCRLSWASLVHGGGALQPIETLKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TPSQCCGHRLAADRVHDSHPTNMTPQHPKTHPESCSYCRLSWASLVHGGGALQPIETLKK
310 320 330 340 350 360
370 380 390 400 410
pF1KE1 QISEDRKQQLMLQKMELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYN----------
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QISEDRKQQLMLQKMELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYNWLKAQALFKS
370 380 390 400 410 420
420 430 440
pF1KE1 --------------------------CLLKSNCDGWLLGTSSSIKKHQDPPNSGENRKER
:::::::::::::::::::::::::::::::::
XP_005 RELVAEKQLTKPQELKLDMNGSDSGPSLLKSNCDGWLLGTSSSIKKHQDPPNSGENRKER
430 440 450 460 470 480
450 460 470 480 490 500
pF1KE1 KTVGFHSHMKDDAQWSCQKKDTCRPQRGTVTGVRKDASTSPMPTGSLKDFVTTASPSLQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KTVGFHSHMKDDAQWSCQKKDTCRPQRGTVTGVRKDASTSPMPTGSLKDFVTTASPSLQH
490 500 510 520 530 540
510 520 530 540 550 560
pF1KE1 TTSRYETSLLDLVQSLSPNSAPKPQRYPSREAGAWNHGTFRLSPLKSTRKKMGMHRTPEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TTSRYETSLLDLVQSLSPNSAPKPQRYPSREAGAWNHGTFRLSPLKSTRKKMGMHRTPEE
550 560 570 580 590 600
570
pF1KE1 LEENQILEDIFFI
:::::::::
XP_005 LEENQILEDIFFI
610
>>XP_016881365 (OMIM: 616480) PREDICTED: protein hinderi (609 aa)
initn: 3661 init1: 2542 opt: 2542 Z-score: 1646.4 bits: 314.6 E(85289): 5.8e-85
Smith-Waterman score: 3566; 93.4% identity (93.7% similar) in 589 aa overlap (21-573:17-605)
10 20 30 40 50 60
pF1KE1 MADVAGPSRPSAAAFWSRDFSDEEQSVVYVPGISAEGNVRSRHKLMSPKADVKLKTSRVT
::::::::::::::::::::::::::::::::::::::::
XP_016 MPDNIIVFSFMFSCVVSDEEQSVVYVPGISAEGNVRSRHKLMSPKADVKLKTSRVT
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 DVSISMESLKGTGDSADEQNSCRGEIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTE
:.:::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
XP_016 DASISMESLKGTGDSVDEQNSCRGEIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 ERLKAEQESFEKKIRQLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERLKAEQESFEKKIRQLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE1 SELGAARMQEQQVSSRKSTLQCSSVELDGSYLSIARPQTYYQTKQRPKSAVQDSASESLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SELGAARMQEQQVSSRKSTLQCSSVELDGSYLSIARPQTYYQTKQRPKSAVQDSASESLI
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE1 AFRNNSLKPVTLHHPKDDLDKIPSETTTCNCESPGRKPAVPTEKMPQEELHMKECPHLKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AFRNNSLKPVTLHHPKDDLDKIPSETTTCNCESPGRKPAVPTEKMPQEELHMKECPHLKP
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE1 TPSQCCGHRLAADRVHDSHPTNMTPQHPKTHPESCSYCRLSWASLVHGGGALQPIETLKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TPSQCCGHRLAADRVHDSHPTNMTPQHPKTHPESCSYCRLSWASLVHGGGALQPIETLKK
300 310 320 330 340 350
370 380 390 400 410
pF1KE1 QISEDRKQQLMLQKMELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYN----------
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QISEDRKQQLMLQKMELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYNWLKAQALFKS
360 370 380 390 400 410
420 430 440
pF1KE1 --------------------------CLLKSNCDGWLLGTSSSIKKHQDPPNSGENRKER
:::::::::::::::::::::::::::::::::
XP_016 RELVAEKQLTKPQELKLDMNGSDSGPSLLKSNCDGWLLGTSSSIKKHQDPPNSGENRKER
420 430 440 450 460 470
450 460 470 480 490 500
pF1KE1 KTVGFHSHMKDDAQWSCQKKDTCRPQRGTVTGVRKDASTSPMPTGSLKDFVTTASPSLQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KTVGFHSHMKDDAQWSCQKKDTCRPQRGTVTGVRKDASTSPMPTGSLKDFVTTASPSLQH
480 490 500 510 520 530
510 520 530 540 550 560
pF1KE1 TTSRYETSLLDLVQSLSPNSAPKPQRYPSREAGAWNHGTFRLSPLKSTRKKMGMHRTPEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TTSRYETSLLDLVQSLSPNSAPKPQRYPSREAGAWNHGTFRLSPLKSTRKKMGMHRTPEE
540 550 560 570 580 590
570
pF1KE1 LEENQILEDIFFI
:::::::::
XP_016 LEENQILEDIFFI
600
>>XP_016881366 (OMIM: 616480) PREDICTED: protein hinderi (568 aa)
initn: 3502 init1: 2383 opt: 2383 Z-score: 1545.0 bits: 295.8 E(85289): 2.6e-79
Smith-Waterman score: 3407; 93.1% identity (93.4% similar) in 564 aa overlap (46-573:1-564)
20 30 40 50 60 70
pF1KE1 WSRDFSDEEQSVVYVPGISAEGNVRSRHKLMSPKADVKLKTSRVTDVSISMESLKGTGDS
::::::::::::::::.:::::::::::::
XP_016 MSPKADVKLKTSRVTDASISMESLKGTGDS
10 20 30
80 90 100 110 120 130
pF1KE1 ADEQNSCRGEIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTEERLKAEQESFEKKIR
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDEQNSCRGEIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTEERLKAEQESFEKKIR
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE1 QLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSLSELGAARMQEQQVSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSLSELGAARMQEQQVSS
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE1 RKSTLQCSSVELDGSYLSIARPQTYYQTKQRPKSAVQDSASESLIAFRNNSLKPVTLHHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RKSTLQCSSVELDGSYLSIARPQTYYQTKQRPKSAVQDSASESLIAFRNNSLKPVTLHHP
160 170 180 190 200 210
260 270 280 290 300 310
pF1KE1 KDDLDKIPSETTTCNCESPGRKPAVPTEKMPQEELHMKECPHLKPTPSQCCGHRLAADRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KDDLDKIPSETTTCNCESPGRKPAVPTEKMPQEELHMKECPHLKPTPSQCCGHRLAADRV
220 230 240 250 260 270
320 330 340 350 360 370
pF1KE1 HDSHPTNMTPQHPKTHPESCSYCRLSWASLVHGGGALQPIETLKKQISEDRKQQLMLQKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HDSHPTNMTPQHPKTHPESCSYCRLSWASLVHGGGALQPIETLKKQISEDRKQQLMLQKM
280 290 300 310 320 330
380 390 400 410
pF1KE1 ELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYN-------------------------
:::::::::::::::::::::::::::::::::::
XP_016 ELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYNWLKAQALFKSRELVAEKQLTKPQEL
340 350 360 370 380 390
420 430 440 450
pF1KE1 -----------CLLKSNCDGWLLGTSSSIKKHQDPPNSGENRKERKTVGFHSHMKDDAQW
::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLDMNGSDSGPSLLKSNCDGWLLGTSSSIKKHQDPPNSGENRKERKTVGFHSHMKDDAQW
400 410 420 430 440 450
460 470 480 490 500 510
pF1KE1 SCQKKDTCRPQRGTVTGVRKDASTSPMPTGSLKDFVTTASPSLQHTTSRYETSLLDLVQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SCQKKDTCRPQRGTVTGVRKDASTSPMPTGSLKDFVTTASPSLQHTTSRYETSLLDLVQS
460 470 480 490 500 510
520 530 540 550 560 570
pF1KE1 LSPNSAPKPQRYPSREAGAWNHGTFRLSPLKSTRKKMGMHRTPEELEENQILEDIFFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSPNSAPKPQRYPSREAGAWNHGTFRLSPLKSTRKKMGMHRTPEELEENQILEDIFFI
520 530 540 550 560
>>XP_011524401 (OMIM: 616480) PREDICTED: protein hinderi (568 aa)
initn: 3502 init1: 2383 opt: 2383 Z-score: 1545.0 bits: 295.8 E(85289): 2.6e-79
Smith-Waterman score: 3407; 93.1% identity (93.4% similar) in 564 aa overlap (46-573:1-564)
20 30 40 50 60 70
pF1KE1 WSRDFSDEEQSVVYVPGISAEGNVRSRHKLMSPKADVKLKTSRVTDVSISMESLKGTGDS
::::::::::::::::.:::::::::::::
XP_011 MSPKADVKLKTSRVTDASISMESLKGTGDS
10 20 30
80 90 100 110 120 130
pF1KE1 ADEQNSCRGEIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTEERLKAEQESFEKKIR
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VDEQNSCRGEIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTEERLKAEQESFEKKIR
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE1 QLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSLSELGAARMQEQQVSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSLSELGAARMQEQQVSS
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE1 RKSTLQCSSVELDGSYLSIARPQTYYQTKQRPKSAVQDSASESLIAFRNNSLKPVTLHHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RKSTLQCSSVELDGSYLSIARPQTYYQTKQRPKSAVQDSASESLIAFRNNSLKPVTLHHP
160 170 180 190 200 210
260 270 280 290 300 310
pF1KE1 KDDLDKIPSETTTCNCESPGRKPAVPTEKMPQEELHMKECPHLKPTPSQCCGHRLAADRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KDDLDKIPSETTTCNCESPGRKPAVPTEKMPQEELHMKECPHLKPTPSQCCGHRLAADRV
220 230 240 250 260 270
320 330 340 350 360 370
pF1KE1 HDSHPTNMTPQHPKTHPESCSYCRLSWASLVHGGGALQPIETLKKQISEDRKQQLMLQKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HDSHPTNMTPQHPKTHPESCSYCRLSWASLVHGGGALQPIETLKKQISEDRKQQLMLQKM
280 290 300 310 320 330
380 390 400 410
pF1KE1 ELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYN-------------------------
:::::::::::::::::::::::::::::::::::
XP_011 ELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYNWLKAQALFKSRELVAEKQLTKPQEL
340 350 360 370 380 390
420 430 440 450
pF1KE1 -----------CLLKSNCDGWLLGTSSSIKKHQDPPNSGENRKERKTVGFHSHMKDDAQW
::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KLDMNGSDSGPSLLKSNCDGWLLGTSSSIKKHQDPPNSGENRKERKTVGFHSHMKDDAQW
400 410 420 430 440 450
460 470 480 490 500 510
pF1KE1 SCQKKDTCRPQRGTVTGVRKDASTSPMPTGSLKDFVTTASPSLQHTTSRYETSLLDLVQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SCQKKDTCRPQRGTVTGVRKDASTSPMPTGSLKDFVTTASPSLQHTTSRYETSLLDLVQS
460 470 480 490 500 510
520 530 540 550 560 570
pF1KE1 LSPNSAPKPQRYPSREAGAWNHGTFRLSPLKSTRKKMGMHRTPEELEENQILEDIFFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSPNSAPKPQRYPSREAGAWNHGTFRLSPLKSTRKKMGMHRTPEELEENQILEDIFFI
520 530 540 550 560
>>XP_005258375 (OMIM: 616480) PREDICTED: protein hinderi (568 aa)
initn: 3502 init1: 2383 opt: 2383 Z-score: 1545.0 bits: 295.8 E(85289): 2.6e-79
Smith-Waterman score: 3407; 93.1% identity (93.4% similar) in 564 aa overlap (46-573:1-564)
20 30 40 50 60 70
pF1KE1 WSRDFSDEEQSVVYVPGISAEGNVRSRHKLMSPKADVKLKTSRVTDVSISMESLKGTGDS
::::::::::::::::.:::::::::::::
XP_005 MSPKADVKLKTSRVTDASISMESLKGTGDS
10 20 30
80 90 100 110 120 130
pF1KE1 ADEQNSCRGEIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTEERLKAEQESFEKKIR
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VDEQNSCRGEIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTEERLKAEQESFEKKIR
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE1 QLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSLSELGAARMQEQQVSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSLSELGAARMQEQQVSS
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE1 RKSTLQCSSVELDGSYLSIARPQTYYQTKQRPKSAVQDSASESLIAFRNNSLKPVTLHHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RKSTLQCSSVELDGSYLSIARPQTYYQTKQRPKSAVQDSASESLIAFRNNSLKPVTLHHP
160 170 180 190 200 210
260 270 280 290 300 310
pF1KE1 KDDLDKIPSETTTCNCESPGRKPAVPTEKMPQEELHMKECPHLKPTPSQCCGHRLAADRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KDDLDKIPSETTTCNCESPGRKPAVPTEKMPQEELHMKECPHLKPTPSQCCGHRLAADRV
220 230 240 250 260 270
320 330 340 350 360 370
pF1KE1 HDSHPTNMTPQHPKTHPESCSYCRLSWASLVHGGGALQPIETLKKQISEDRKQQLMLQKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HDSHPTNMTPQHPKTHPESCSYCRLSWASLVHGGGALQPIETLKKQISEDRKQQLMLQKM
280 290 300 310 320 330
380 390 400 410
pF1KE1 ELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYN-------------------------
:::::::::::::::::::::::::::::::::::
XP_005 ELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYNWLKAQALFKSRELVAEKQLTKPQEL
340 350 360 370 380 390
420 430 440 450
pF1KE1 -----------CLLKSNCDGWLLGTSSSIKKHQDPPNSGENRKERKTVGFHSHMKDDAQW
::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KLDMNGSDSGPSLLKSNCDGWLLGTSSSIKKHQDPPNSGENRKERKTVGFHSHMKDDAQW
400 410 420 430 440 450
460 470 480 490 500 510
pF1KE1 SCQKKDTCRPQRGTVTGVRKDASTSPMPTGSLKDFVTTASPSLQHTTSRYETSLLDLVQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SCQKKDTCRPQRGTVTGVRKDASTSPMPTGSLKDFVTTASPSLQHTTSRYETSLLDLVQS
460 470 480 490 500 510
520 530 540 550 560 570
pF1KE1 LSPNSAPKPQRYPSREAGAWNHGTFRLSPLKSTRKKMGMHRTPEELEENQILEDIFFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSPNSAPKPQRYPSREAGAWNHGTFRLSPLKSTRKKMGMHRTPEELEENQILEDIFFI
520 530 540 550 560
>>NP_001309256 (OMIM: 616480) protein hinderin isoform 2 (505 aa)
initn: 3110 init1: 1991 opt: 1991 Z-score: 1294.6 bits: 249.3 E(85289): 2.3e-65
Smith-Waterman score: 3015; 92.2% identity (92.4% similar) in 501 aa overlap (109-573:1-501)
80 90 100 110 120 130
pF1KE1 QNSCRGEIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTEERLKAEQESFEKKIRQLE
. ::::::::::::::::::::::::::::
NP_001 MNRVSEEKEVTEERLKAEQESFEKKIRQLE
10 20 30
140 150 160 170 180 190
pF1KE1 EQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSLSELGAARMQEQQVSSRKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSLSELGAARMQEQQVSSRKS
40 50 60 70 80 90
200 210 220 230 240 250
pF1KE1 TLQCSSVELDGSYLSIARPQTYYQTKQRPKSAVQDSASESLIAFRNNSLKPVTLHHPKDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLQCSSVELDGSYLSIARPQTYYQTKQRPKSAVQDSASESLIAFRNNSLKPVTLHHPKDD
100 110 120 130 140 150
260 270 280 290 300 310
pF1KE1 LDKIPSETTTCNCESPGRKPAVPTEKMPQEELHMKECPHLKPTPSQCCGHRLAADRVHDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDKIPSETTTCNCESPGRKPAVPTEKMPQEELHMKECPHLKPTPSQCCGHRLAADRVHDS
160 170 180 190 200 210
320 330 340 350 360 370
pF1KE1 HPTNMTPQHPKTHPESCSYCRLSWASLVHGGGALQPIETLKKQISEDRKQQLMLQKMELE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HPTNMTPQHPKTHPESCSYCRLSWASLVHGGGALQPIETLKKQISEDRKQQLMLQKMELE
220 230 240 250 260 270
380 390 400 410
pF1KE1 IEKERLQHLLAQQETKLLLKQQQLHQSRLDYN----------------------------
::::::::::::::::::::::::::::::::
NP_001 IEKERLQHLLAQQETKLLLKQQQLHQSRLDYNWLKAQALFKSRELVAEKQLTKPQELKLD
280 290 300 310 320 330
420 430 440 450 460
pF1KE1 --------CLLKSNCDGWLLGTSSSIKKHQDPPNSGENRKERKTVGFHSHMKDDAQWSCQ
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNGSDSGPSLLKSNCDGWLLGTSSSIKKHQDPPNSGENRKERKTVGFHSHMKDDAQWSCQ
340 350 360 370 380 390
470 480 490 500 510 520
pF1KE1 KKDTCRPQRGTVTGVRKDASTSPMPTGSLKDFVTTASPSLQHTTSRYETSLLDLVQSLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKDTCRPQRGTVTGVRKDASTSPMPTGSLKDFVTTASPSLQHTTSRYETSLLDLVQSLSP
400 410 420 430 440 450
530 540 550 560 570
pF1KE1 NSAPKPQRYPSREAGAWNHGTFRLSPLKSTRKKMGMHRTPEELEENQILEDIFFI
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSAPKPQRYPSREAGAWNHGTFRLSPLKSTRKKMGMHRTPEELEENQILEDIFFI
460 470 480 490 500
577 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 19:30:49 2016 done: Sat Nov 5 19:30:51 2016
Total Scan time: 12.000 Total Display time: 0.130
Function used was FASTA [36.3.4 Apr, 2011]