Result of FASTA (ccds) for
pF1KE1051
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1051, 445 aa
1>>>pF1KE1051 445 - 445 aa - 445 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3350+/-0.00076; mu= 18.3246+/- 0.046
mean_var=72.5378+/-14.522, 0's: 0 Z-trim(109.4): 23 B-trim: 0 in 0/52
Lambda= 0.150589
statistics sampled from 10869 (10891) to 10869 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.696), E-opt: 0.2 (0.335), width: 16
Scan time: 3.160
The best scores are: opt bits E(32554)
CCDS8013.1 FADS3 gene_id:3995|Hs108|chr11 ( 445) 3152 693.7 9.4e-200
CCDS8012.1 FADS2 gene_id:9415|Hs108|chr11 ( 444) 2051 454.5 9.5e-128
CCDS60808.1 FADS2 gene_id:9415|Hs108|chr11 ( 413) 1791 398.0 9e-111
CCDS60807.1 FADS2 gene_id:9415|Hs108|chr11 ( 422) 1791 398.0 9.2e-111
CCDS8011.2 FADS1 gene_id:3992|Hs108|chr11 ( 501) 1682 374.4 1.4e-103
>>CCDS8013.1 FADS3 gene_id:3995|Hs108|chr11 (445 aa)
initn: 3152 init1: 3152 opt: 3152 Z-score: 3699.7 bits: 693.7 E(32554): 9.4e-200
Smith-Waterman score: 3152; 100.0% identity (100.0% similar) in 445 aa overlap (1-445:1-445)
10 20 30 40 50 60
pF1KE1 MGGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDKWLVIERRVYDISRWAQRHPGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 MGGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDKWLVIERRVYDISRWAQRHPGGSR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LIGHHGAEDATDAFRAFHQDLNFVRKFLQPLLIGELAPEEPSQDGPLNAQLVEDFRALHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 LIGHHGAEDATDAFRAFHQDLNFVRKFLQPLLIGELAPEEPSQDGPLNAQLVEDFRALHQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 AAEDMKLFDASPTFFAFLLGHILAMEVLAWLLIYLLGPGWVPSALAAFILAISQAQSWCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 AAEDMKLFDASPTFFAFLLGHILAMEVLAWLLIYLLGPGWVPSALAAFILAISQAQSWCL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 QHDLGHASIFKKSWWNHVAQKFVMGQLKGFSAHWWNFRHFQHHAKPNIFHKDPDVTVAPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 QHDLGHASIFKKSWWNHVAQKFVMGQLKGFSAHWWNFRHFQHHAKPNIFHKDPDVTVAPV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 FLLGESSVEYGKKKRRYLPYNQQHLYFFLIGPPLLTLVNFEVENLAYMLVCMQWADLLWA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 FLLGESSVEYGKKKRRYLPYNQQHLYFFLIGPPLLTLVNFEVENLAYMLVCMQWADLLWA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 ASFYARFFLSYLPFYGVPGVLLFFVAVRVLESHWFVWITQMNHIPKEIGHEKHRDWVSSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 ASFYARFFLSYLPFYGVPGVLLFFVAVRVLESHWFVWITQMNHIPKEIGHEKHRDWVSSQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LAATCNVEPSLFTNWFSGHLNFQIEHHLFPRMPRHNYSRVAPLVKSLCAKHGLSYEVKPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 LAATCNVEPSLFTNWFSGHLNFQIEHHLFPRMPRHNYSRVAPLVKSLCAKHGLSYEVKPF
370 380 390 400 410 420
430 440
pF1KE1 LTALVDIVRSLKKSGDIWLDAYLHQ
:::::::::::::::::::::::::
CCDS80 LTALVDIVRSLKKSGDIWLDAYLHQ
430 440
>>CCDS8012.1 FADS2 gene_id:9415|Hs108|chr11 (444 aa)
initn: 2076 init1: 1064 opt: 2051 Z-score: 2407.0 bits: 454.5 E(32554): 9.5e-128
Smith-Waterman score: 2051; 62.6% identity (84.1% similar) in 446 aa overlap (1-445:1-444)
10 20 30 40 50 60
pF1KE1 MGGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDKWLVIERRVYDISRWAQRHPGGSR
:: :. : :: :. . .::: ::.:. :. :.::::.:.::.:..:. .::::.:
CCDS80 MGKGGNQG--EGAAEREVSVPTFSWEEIQKHNLRTDRWLVIDRKVYNITKWSIQHPGGQR
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 LIGHHGAEDATDAFRAFHQDLNFVRKFLQPLLIGELAPEEPSQDGPLNAQLVEDFRALHQ
.:::...::::::::::: ::.:: :::.::::::::::::::: :....::::::..
CCDS80 VIGHYAGEDATDAFRAFHPDLEFVGKFLKPLLIGELAPEEPSQDHGKNSKITEDFRALRK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 AAEDMKLFDASPTFFAFLLGHILAMEVLAWLLIYLLGPGWVPSALAAFILAISQAQSWCL
.::::.:: .. .:: .::.::.:.: .::. .. .: ::.:. ..::.:: ::::. :
CCDS80 TAEDMNLFKTNHVFFLLLLAHIIALESIAWFTVFYFGNGWIPTLITAFVLATSQAQAGWL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE1 QHDLGHASIFKKSWWNHVAQKFVMGQLKGFSAHWWNFRHFQHHAKPNIFHKDPDVTVAPV
::: :: :...: :::...:::.:.::: ::.::: ::::::::::::::::::.. :
CCDS80 QHDYGHLSVYRKPKWNHLVHKFVIGHLKGASANWWNHRHFQHHAKPNIFHKDPDVNMLHV
180 190 200 210 220 230
250 260 270 280 290
pF1KE1 FLLGE-SSVEYGKKKRRYLPYNQQHLYFFLIGPPLLTLVNFEVENLAYMLVCMQWADLLW
:.::: . .:::::: .:::::.:: :::::::::: . :. . . :.: .:.:: :
CCDS80 FVLGEWQPIEYGKKKLKYLPYNHQHEYFFLIGPPLLIPMYFQYQIIMTMIVHKNWVDLAW
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE1 AASFYARFFLSYLPFYGVPGVLLFFVAVRVLESHWFVWITQMNHIPKEIGHEKHRDWVSS
:.:.: :::..:.::::. :.:::. .: ::::::::.:::::: :: .: .::: ::
CCDS80 AVSYYIRFFITYIPFYGILGALLFLNFIRFLESHWFVWVTQMNHIVMEIDQEAYRDWFSS
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE1 QLAATCNVEPSLFTNWFSGHLNFQIEHHLFPRMPRHNYSRVAPLVKSLCAKHGLSYEVKP
::.:::::: :.:..:::::::::::::::: ::::: ..::::::::::::. :. ::
CCDS80 QLTATCNVEQSFFNDWFSGHLNFQIEHHLFPTMPRHNLHKIAPLVKSLCAKHGIEYQEKP
360 370 380 390 400 410
420 430 440
pF1KE1 FLTALVDIVRSLKKSGDIWLDAYLHQ
.: ::.::.::::::: .:::::::.
CCDS80 LLRALLDIIRSLKKSGKLWLDAYLHK
420 430 440
>>CCDS60808.1 FADS2 gene_id:9415|Hs108|chr11 (413 aa)
initn: 1826 init1: 986 opt: 1791 Z-score: 2102.2 bits: 398.0 E(32554): 9e-111
Smith-Waterman score: 1791; 64.2% identity (84.7% similar) in 380 aa overlap (67-445:34-413)
40 50 60 70 80 90
pF1KE1 KWLVIERRVYDISRWAQRHPGGSRLIGHHGAEDATDAFRAFHQDLNFVRKFLQPLLIGEL
: .. ::::::: ::.:: :::.:::::::
CCDS60 EPPGCRRVNSLMLYTLRSITSHRSSHPERWATSSQDAFRAFHPDLEFVGKFLKPLLIGEL
10 20 30 40 50 60
100 110 120 130 140 150
pF1KE1 APEEPSQDGPLNAQLVEDFRALHQAAEDMKLFDASPTFFAFLLGHILAMEVLAWLLIYLL
:::::::: :....::::::...::::.:: .. .:: .::.::.:.: .::. .. .
CCDS60 APEEPSQDHGKNSKITEDFRALRKTAEDMNLFKTNHVFFLLLLAHIIALESIAWFTVFYF
70 80 90 100 110 120
160 170 180 190 200 210
pF1KE1 GPGWVPSALAAFILAISQAQSWCLQHDLGHASIFKKSWWNHVAQKFVMGQLKGFSAHWWN
: ::.:. ..::.:: ::::. :::: :: :...: :::...:::.:.::: ::.:::
CCDS60 GNGWIPTLITAFVLATSQAQAGWLQHDYGHLSVYRKPKWNHLVHKFVIGHLKGASANWWN
130 140 150 160 170 180
220 230 240 250 260 270
pF1KE1 FRHFQHHAKPNIFHKDPDVTVAPVFLLGE-SSVEYGKKKRRYLPYNQQHLYFFLIGPPLL
::::::::::::::::::.. ::.::: . .:::::: .:::::.:: ::::::::::
CCDS60 HRHFQHHAKPNIFHKDPDVNMLHVFVLGEWQPIEYGKKKLKYLPYNHQHEYFFLIGPPLL
190 200 210 220 230 240
280 290 300 310 320 330
pF1KE1 TLVNFEVENLAYMLVCMQWADLLWAASFYARFFLSYLPFYGVPGVLLFFVAVRVLESHWF
. :. . . :.: .:.:: ::.:.: :::..:.::::. :.:::. .: ::::::
CCDS60 IPMYFQYQIIMTMIVHKNWVDLAWAVSYYIRFFITYIPFYGILGALLFLNFIRFLESHWF
250 260 270 280 290 300
340 350 360 370 380 390
pF1KE1 VWITQMNHIPKEIGHEKHRDWVSSQLAATCNVEPSLFTNWFSGHLNFQIEHHLFPRMPRH
::.:::::: :: .: .::: ::::.:::::: :.:..:::::::::::::::: ::::
CCDS60 VWVTQMNHIVMEIDQEAYRDWFSSQLTATCNVEQSFFNDWFSGHLNFQIEHHLFPTMPRH
310 320 330 340 350 360
400 410 420 430 440
pF1KE1 NYSRVAPLVKSLCAKHGLSYEVKPFLTALVDIVRSLKKSGDIWLDAYLHQ
: ..::::::::::::. :. ::.: ::.::.::::::: .:::::::.
CCDS60 NLHKIAPLVKSLCAKHGIEYQEKPLLRALLDIIRSLKKSGKLWLDAYLHK
370 380 390 400 410
>>CCDS60807.1 FADS2 gene_id:9415|Hs108|chr11 (422 aa)
initn: 1822 init1: 986 opt: 1791 Z-score: 2102.0 bits: 398.0 E(32554): 9.2e-111
Smith-Waterman score: 1791; 63.0% identity (83.2% similar) in 392 aa overlap (55-445:35-422)
30 40 50 60 70 80
pF1KE1 WEQIRAHDQPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHGAEDATDAFRAFHQDLNFV
::... :: ::::::: ::.::
CCDS60 EAGPFVCVCVLLASIPTPQTPLLQASLPPFHPASA---GHP-ITGQQDAFRAFHPDLEFV
10 20 30 40 50 60
90 100 110 120 130 140
pF1KE1 RKFLQPLLIGELAPEEPSQDGPLNAQLVEDFRALHQAAEDMKLFDASPTFFAFLLGHILA
:::.::::::::::::::: :....::::::...::::.:: .. .:: .::.::.:
CCDS60 GKFLKPLLIGELAPEEPSQDHGKNSKITEDFRALRKTAEDMNLFKTNHVFFLLLLAHIIA
70 80 90 100 110 120
150 160 170 180 190 200
pF1KE1 MEVLAWLLIYLLGPGWVPSALAAFILAISQAQSWCLQHDLGHASIFKKSWWNHVAQKFVM
.: .::. .. .: ::.:. ..::.:: ::::. :::: :: :...: :::...:::.
CCDS60 LESIAWFTVFYFGNGWIPTLITAFVLATSQAQAGWLQHDYGHLSVYRKPKWNHLVHKFVI
130 140 150 160 170 180
210 220 230 240 250 260
pF1KE1 GQLKGFSAHWWNFRHFQHHAKPNIFHKDPDVTVAPVFLLGE-SSVEYGKKKRRYLPYNQQ
:.::: ::.::: ::::::::::::::::::.. ::.::: . .:::::: .:::::.:
CCDS60 GHLKGASANWWNHRHFQHHAKPNIFHKDPDVNMLHVFVLGEWQPIEYGKKKLKYLPYNHQ
190 200 210 220 230 240
270 280 290 300 310 320
pF1KE1 HLYFFLIGPPLLTLVNFEVENLAYMLVCMQWADLLWAASFYARFFLSYLPFYGVPGVLLF
: :::::::::: . :. . . :.: .:.:: ::.:.: :::..:.::::. :.:::
CCDS60 HEYFFLIGPPLLIPMYFQYQIIMTMIVHKNWVDLAWAVSYYIRFFITYIPFYGILGALLF
250 260 270 280 290 300
330 340 350 360 370 380
pF1KE1 FVAVRVLESHWFVWITQMNHIPKEIGHEKHRDWVSSQLAATCNVEPSLFTNWFSGHLNFQ
. .: ::::::::.:::::: :: .: .::: ::::.:::::: :.:..:::::::::
CCDS60 LNFIRFLESHWFVWVTQMNHIVMEIDQEAYRDWFSSQLTATCNVEQSFFNDWFSGHLNFQ
310 320 330 340 350 360
390 400 410 420 430 440
pF1KE1 IEHHLFPRMPRHNYSRVAPLVKSLCAKHGLSYEVKPFLTALVDIVRSLKKSGDIWLDAYL
::::::: ::::: ..::::::::::::. :. ::.: ::.::.::::::: .::::::
CCDS60 IEHHLFPTMPRHNLHKIAPLVKSLCAKHGIEYQEKPLLRALLDIIRSLKKSGKLWLDAYL
370 380 390 400 410 420
pF1KE1 HQ
:.
CCDS60 HK
>>CCDS8011.2 FADS1 gene_id:3992|Hs108|chr11 (501 aa)
initn: 1719 init1: 922 opt: 1682 Z-score: 1973.0 bits: 374.4 E(32554): 1.4e-103
Smith-Waterman score: 1682; 52.4% identity (78.2% similar) in 450 aa overlap (3-445:52-501)
10 20
pF1KE1 MGGVGEPGPREGP--AQPGAPLPT---FCWEQ
::..:. : :. .: :: : :..
CCDS80 RLALGARQQIHSWSPRTPSTRLTAPAGPARGVARPAMAPDPVAAETAAQGPTPRYFTWDE
30 40 50 60 70 80
30 40 50 60 70 80
pF1KE1 IRAHDQPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHGAEDATDAFRAFHQDLNFVRKF
. .. ..::::.:.::.::....:::::::.:.:....:::: : ::: . ..:.:.
CCDS80 VAQRSGCEERWLVIDRKVYNISEFTRRHPGGSRVISHYAGQDATDPFVAFHINKGLVKKY
90 100 110 120 130 140
90 100 110 120 130 140
pF1KE1 LQPLLIGELAPEEPSQDGPLNAQLVEDFRALHQAAEDMKLFDASPTFFAFLLGHILAMEV
.. ::::::.::.:: . : .:...:: :. ..: : :. :. .:: . : ::: ..
CCDS80 MNSLLIGELSPEQPSFEPTKNKELTDEFRELRATVERMGLMKANHVFFLLYLLHILLLDG
150 160 170 180 190 200
150 160 170 180 190 200
pF1KE1 LAWLLIYLLGPGWVPSALAAFILAISQAQSWCLQHDLGHASIFKKSWWNHVAQKFVMGQL
::: ....: ...: : : .:. :::. ::::.:: :.:. : :::. ..::.:.:
CCDS80 AAWLTLWVFGTSFLPFLLCAVLLSAVQAQAGWLQHDFGHLSVFSTSKWNHLLHHFVIGHL
210 220 230 240 250 260
210 220 230 240 250 260
pF1KE1 KGFSAHWWNFRHFQHHAKPNIFHKDPDVTVAPVFL-LGES-SVEYGKKKRRYLPYNQQHL
:: : ::: ::::::::: :.::::... : :. ::. ::: ::.:..:.:::.::
CCDS80 KGAPASWWNHMHFQHHAKPNCFRKDPDINMHPFFFALGKILSVELGKQKKKYMPYNHQHK
270 280 290 300 310 320
270 280 290 300 310 320
pF1KE1 YFFLIGPPLLTLVNFEVENLAYMLVCMQWADLLWAASFYARFFLSYLPFYGVPGVLLFFV
:::::::: : . :. . ... .:.:: : .::.::::.:.:. :. . : .:
CCDS80 YFFLIGPPALLPLYFQWYIFYFVIQRKKWVDLAWMITFYVRFFLTYVPLLGLKAFLGLFF
330 340 350 360 370 380
330 340 350 360 370 380
pF1KE1 AVRVLESHWFVWITQMNHIPKEIGHEKHRDWVSSQLAATCNVEPSLFTNWFSGHLNFQIE
:: :::.::::.::::::: .: :... ::::.:: :::::. : :..:::::::::::
CCDS80 IVRFLESNWFVWVTQMNHIPMHIDHDRNMDWVSTQLQATCNVHKSAFNDWFSGHLNFQIE
390 400 410 420 430 440
390 400 410 420 430 440
pF1KE1 HHLFPRMPRHNYSRVAPLVKSLCAKHGLSYEVKPFLTALVDIVRSLKKSGDIWLDAYLHQ
::::: :::::: .:::::.:::::::. :. ::.:.:..::..:::.::..::::::::
CCDS80 HHLFPTMPRHNYHKVAPLVQSLCAKHGIEYQSKPLLSAFADIIHSLKESGQLWLDAYLHQ
450 460 470 480 490 500
445 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 07:49:17 2016 done: Sat Nov 5 07:49:17 2016
Total Scan time: 3.160 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]