Result of FASTA (ccds) for
pF1KE1048
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1048, 397 aa
1>>>pF1KE1048 397 - 397 aa - 397 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4489+/-0.000921; mu= 16.3802+/- 0.055
mean_var=67.4854+/-13.343, 0's: 0 Z-trim(105.4): 20 B-trim: 0 in 0/51
Lambda= 0.156124
statistics sampled from 8406 (8421) to 8406 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.64), E-opt: 0.2 (0.259), width: 16
Scan time: 2.870
The best scores are: opt bits E(32554)
CCDS11939.1 ACAA2 gene_id:10449|Hs108|chr18 ( 397) 2580 590.1 1.2e-168
CCDS5268.1 ACAT2 gene_id:39|Hs108|chr6 ( 397) 1004 235.2 8.3e-62
CCDS8339.1 ACAT1 gene_id:38|Hs108|chr11 ( 427) 876 206.3 4.2e-53
CCDS2673.1 ACAA1 gene_id:30|Hs108|chr3 ( 424) 805 190.3 2.7e-48
CCDS46794.1 ACAA1 gene_id:30|Hs108|chr3 ( 331) 268 69.3 5.7e-12
>>CCDS11939.1 ACAA2 gene_id:10449|Hs108|chr18 (397 aa)
initn: 2580 init1: 2580 opt: 2580 Z-score: 3141.5 bits: 590.1 E(32554): 1.2e-168
Smith-Waterman score: 2580; 100.0% identity (100.0% similar) in 397 aa overlap (1-397:1-397)
10 20 30 40 50 60
pF1KE1 MALLRGVFVVAAKRTPFGAYGGLLKDFTATDLSEFAAKAALSAGKVSPETVDSVIMGNVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MALLRGVFVVAAKRTPFGAYGGLLKDFTATDLSEFAAKAALSAGKVSPETVDSVIMGNVL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 QSSSDAIYLARHVGLRVGIPKETPALTINRLCGSGFQSIVNGCQEICVKEAEVVLCGGTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QSSSDAIYLARHVGLRVGIPKETPALTINRLCGSGFQSIVNGCQEICVKEAEVVLCGGTE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 SMSQAPYCVRNVRFGTKLGSDIKLEDSLWVSLTDQHVQLPMAMTAENLAVKHKISREECD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SMSQAPYCVRNVRFGTKLGSDIKLEDSLWVSLTDQHVQLPMAMTAENLAVKHKISREECD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 KYALQSQQRWKAANDAGYFNDEMAPIEVKTKKGKQTMQVDEHARPQTTLEQLQKLPPVFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KYALQSQQRWKAANDAGYFNDEMAPIEVKTKKGKQTMQVDEHARPQTTLEQLQKLPPVFK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 KDGTVTAGNASGVADGAGAVIIASEDAVKKHNFTPLARIVGYFVSGCDPSIMGIGPVPAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KDGTVTAGNASGVADGAGAVIIASEDAVKKHNFTPLARIVGYFVSGCDPSIMGIGPVPAI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 SGALKKAGLSLKDMDLVEVNEAFAPQYLAVERSLDLDISKTNVNGGAIALGHPLGGSGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SGALKKAGLSLKDMDLVEVNEAFAPQYLAVERSLDLDISKTNVNGGAIALGHPLGGSGSR
310 320 330 340 350 360
370 380 390
pF1KE1 ITAHLVHELRRRGGKYAVGSACIGGGQGIAVIIQSTA
:::::::::::::::::::::::::::::::::::::
CCDS11 ITAHLVHELRRRGGKYAVGSACIGGGQGIAVIIQSTA
370 380 390
>>CCDS5268.1 ACAT2 gene_id:39|Hs108|chr6 (397 aa)
initn: 1026 init1: 534 opt: 1004 Z-score: 1223.1 bits: 235.2 E(32554): 8.3e-62
Smith-Waterman score: 1004; 43.0% identity (72.1% similar) in 391 aa overlap (7-394:8-395)
10 20 30 40 50
pF1KE1 MALLRGVFVVAAKRTPFGAYGGLLKDFTATDLSEFAAKAALSAGKVSPETVDSVIMGNV
: .:.: :: .:...: : . ::. . : .:. . :.:: :. ::.:.:
CCDS52 MNAGSDPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 LQSSSDAIYLARHVGLRVGIPKETPALTINRLCGSGFQSIVNGCQEICVKEAEVVLCGGT
: .. . :.... .::: .:: . . .::::.... . : : . .. .:. ::
CCDS52 LAAGCGQNPV-RQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGM
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 ESMSQAPYCVRNVRFGTKLGSDIKLEDSLWVS-LTDQHVQLPMAMTAENLAVKHKISREE
:.::.::. . .: :.:.: .. : ::. . ::: . :..::::.: : ..:::.
CCDS52 ENMSKAPHLAY-LRTGVKIG-EMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSRED
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 CDKYALQSQQRWKAANDAGYFNDEMAPIEVKTKKGKQTMQVDEHARPQTTLEQLQKLPPV
:: :. ::.: . :. ::.:. :..:. :.:.:: ...:: : ...: ..:: :
CCDS52 QDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPY
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE1 FKKDGT--VTAGNASGVADGAGAVIIASEDAVKKHNFTPLARIVGYFVSGCDPSIMGIGP
: ::: :: .::::. :::.::.. ... . :...:::::::.. : .::::::::
CCDS52 FLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGP
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE1 VPAISGALKKAGLSLKDMDLVEVNEAFAPQYLAVERSLDLDISKTNVNGGAIALGHPLGG
.:::. :. ::: ::.:.:. :.::::: :. . : :. :.:..:::::::::::.
CCDS52 IPAIKQAVTKAGWSLEDVDIFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGA
300 310 320 330 340 350
360 370 380 390
pF1KE1 SGSRITAHLVHELRRRGGKYAVGSACIGGGQGIAVIIQSTA
:: :: . :.: :.: : . .:.. :::::.:::. .:
CCDS52 SGCRILVTLLHTLERMGRSRGVAALCIGGGMGIAMCVQRE
360 370 380 390
>>CCDS8339.1 ACAT1 gene_id:38|Hs108|chr11 (427 aa)
initn: 657 init1: 401 opt: 876 Z-score: 1066.8 bits: 206.3 E(32554): 4.2e-53
Smith-Waterman score: 876; 42.0% identity (70.6% similar) in 395 aa overlap (4-394:39-425)
10 20 30
pF1KE1 MALLRGVFVVAAKRTPFGAYGGLLKDFTATDLS
:. : .:.: :::.:.. : :. . :: :.
CCDS83 RSGARSRSPLLRRLVQEIRYVERSYVSKPTLKEVVIVSATRTPIGSFLGSLSLLPATKLG
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE1 EFAAKAALSAGKVSPETVDSVIMGNVLQSSSDAIYLARHVGLRVGIPKETPALTINRLCG
.: ..:. . . : : . ::::::.. .. .:.. : .:.: :: :::..:.
CCDS83 SIAIQGAIEKAGIPKEEVKEAYMGNVLQGG-EGQAPTRQAVLGAGLPISTPCTTINKVCA
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE1 SGFQSIVNGCQEICVKEAEVVLCGGTESMSQAPYCVRNVRFGTKLGSDIKLEDSLWVS--
::...:. . : . . .:.. :: ::::..:: : : : .: :. .:::: : :.
CCDS83 SGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPY-VMN-RGSTPYGG-VKLED-LIVKDG
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE1 LTDQHVQLPMAMTAENLAVKHKISREECDKYALQSQQRWKAANDAGYFNDEMAPIEVKTK
::: . .. :. ::: : : .:.:.: : ::..: : ::: .:: :..:. :. : :
CCDS83 LTDVYNKIHMGSCAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTV-TV
190 200 210 220 230 240
220 230 240 250 260
pF1KE1 KGKQTMQVDEHAR-PQTTLEQLQKLPPVFKKD-GTVTAGNASGVADGAGAVIIASEDAVK
::. . : : . .. . .. :: ::.:. :::::.::: . :::.:... . ::.:
CCDS83 KGQPDVVVKEDEEYKRVDFSKVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTADAAK
250 260 270 280 290 300
270 280 290 300 310 320
pF1KE1 KHNFTPLARIVGYFVSGCDPSIMGIGPVPAISGALKKAGLSLKDMDLVEVNEAFAPQYLA
. : :::::::.. .. .: . :.:: : : .:: .::. .:. . ::::::. ::
CCDS83 RLNVTPLARIVAFADAAVEPIDFPIAPVYAASMVLKDVGLKKEDIAMWEVNEAFSLVVLA
310 320 330 340 350 360
330 340 350 360 370 380
pF1KE1 VERSLDLDISKTNVNGGAIALGHPLGGSGSRITAHLVHELRRRGGKYAVGSACIGGGQGI
. :..: .:.:.::::..::::.: ::.::..::.: :.. :.:...: : ::: .
CCDS83 NIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ--GEYGLASICNGGGGAS
370 380 390 400 410 420
390
pF1KE1 AVIIQSTA
:..::
CCDS83 AMLIQKL
>>CCDS2673.1 ACAA1 gene_id:30|Hs108|chr3 (424 aa)
initn: 774 init1: 477 opt: 805 Z-score: 980.4 bits: 190.3 E(32554): 2.7e-48
Smith-Waterman score: 805; 39.2% identity (65.6% similar) in 395 aa overlap (7-394:38-420)
10 20 30
pF1KE1 MALLRGVFVVAAKRTPFGAYG-GLLKDFTATDLSEF
: :: ..:: . : : .:: : .:
CCDS26 LGHLRGPADSGWMPQAAPCLSGAPQASAADVVVVHGRRTAICRAGRGGFKDTTPDELLSA
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE1 AAKAALSAGKVSPETVDSVIMGNVLQSSSDAIYLARHVGLRVGIPKETPALTINRLCGSG
. :.:. .. :: . .. .::::: .. :: .:: . . ::. .: :.:: :.::
CCDS26 VMTAVLKDVNLRPEQLGDICVGNVLQPGAGAI-MARIAQFLSDIPETVPLSTVNRQCSSG
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE1 FQSIVNGCQEICVKEAEVVLCGGTESMSQAPYCVRNVRFGTKLGSDIKLEDSLWVSLTDQ
.:.... : .. . :.:::: : :. .. . : . .
CCDS26 LQAVASIAGGIRNGSYDIGMACGVESMSLADR-----------GNPGNITSRLMEKEKAR
130 140 150 160 170
160 170 180 190 200 210
pF1KE1 HVQLPMAMTAENLAVKHKISREECDKYALQSQQRWKAANDAGYFNDEMAPIE--VKTKKG
.::..:.::.: . ::::. : .:: :::. :.. : :. :..:. :. ::
CCDS26 DCLIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKG
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE1 -KQTMQV--DEHARPQTTLEQLQKLPPVFKKDGTVTAGNASGVADGAGAVIIASEDAVKK
:... : :: ::.::.: : :: :.:::::..::::.: :.:::.:...: .. ...
CCDS26 TKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQVSDGAAAILLARRSKAEE
240 250 260 270 280 290
280 290 300 310 320 330
pF1KE1 HNFTPLARIVGYFVSGCDPSIMGIGPVPAISGALKKAGLSLKDMDLVEVNEAFAPQYLAV
.. :. . .: : : :.::::::. :: ::.::::...:.:. :.::::: :
CCDS26 LGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQAAYC
300 310 320 330 340 350
340 350 360 370 380
pF1KE1 ERSLDLDISKTNVNGGAIALGHPLGGSGSRITAHLVHELRRRGGK-YAVGSACIGGGQGI
..: : :.: :::.::::::: .:.: . :..::.::: . :.: : ::: :.:
CCDS26 VEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKRAYGVVSMCIGTGMGA
360 370 380 390 400 410
390
pF1KE1 AVIIQSTA
:....
CCDS26 AAVFEYPGN
420
>>CCDS46794.1 ACAA1 gene_id:30|Hs108|chr3 (331 aa)
initn: 581 init1: 214 opt: 268 Z-score: 328.4 bits: 69.3 E(32554): 5.7e-12
Smith-Waterman score: 445; 31.4% identity (51.1% similar) in 395 aa overlap (7-394:38-327)
10 20 30
pF1KE1 MALLRGVFVVAAKRTPFGAYG-GLLKDFTATDLSEF
: :: ..:: . : : .:: : .:
CCDS46 LGHLRGPADSGWMPQAAPCLSGAPQASAADVVVVHGRRTAICRAGRGGFKDTTPDELLSA
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE1 AAKAALSAGKVSPETVDSVIMGNVLQSSSDAIYLARHVGLRVGIPKETPALTINRLCGSG
. :.:. .. :: . .. .::::: .. :: .:: . . ::. .: :.:: :.::
CCDS46 VMTAVLKDVNLRPEQLGDICVGNVLQPGAGAI-MARIAQFLSDIPETVPLSTVNRQCSSG
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE1 FQSIVNGCQEICVKEAEVVLCGGTESMSQAPYCVRNVRFGTKLGSDIKLEDSLWVSLTDQ
.:.... . :: .:: ::
CCDS46 LQAVAS-------------IAGG----------IRN-------GS--------------Y
130 140
160 170 180 190 200 210
pF1KE1 HVQLPMAMTAENLAVKHKISREECDKYALQSQQRWKAANDAGYFNDEMAPIE--VKTKKG
. . ..:.::.: . ::::. : .:: :::. :.. : :. :..:. :. ::
CCDS46 DIGMACGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKG
150 160 170 180 190 200
220 230 240 250 260 270
pF1KE1 -KQTMQV--DEHARPQTTLEQLQKLPPVFKKDGTVTAGNASGVADGAGAVIIASEDAVKK
:... : :: ::.::.: : :: :.:::::..:::
CCDS46 TKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAG----------------------
210 220 230 240
280 290 300 310 320 330
pF1KE1 HNFTPLARIVGYFVSGCDPSIMGIGPVPAISGALKKAGLSLKDMDLVEVNEAFAPQYLAV
:...:.:. :.::::: :
CCDS46 --------------------------------------LTVSDVDIFEINEAFASQAAYC
250 260
340 350 360 370 380
pF1KE1 ERSLDLDISKTNVNGGAIALGHPLGGSGSRITAHLVHELRRRGGK-YAVGSACIGGGQGI
..: : :.: :::.::::::: .:.: . :..::.::: . :.: : ::: :.:
CCDS46 VEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKRAYGVVSMCIGTGMGA
270 280 290 300 310 320
390
pF1KE1 AVIIQSTA
:....
CCDS46 AAVFEYPGN
330
397 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 07:47:27 2016 done: Sat Nov 5 07:47:27 2016
Total Scan time: 2.870 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]