Result of FASTA (omim) for
pF1KE1037
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1037, 387 aa
1>>>pF1KE1037 387 - 387 aa - 387 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4262+/-0.000403; mu= 15.7524+/- 0.025
mean_var=60.5644+/-11.758, 0's: 0 Z-trim(111.5): 28 B-trim: 0 in 0/55
Lambda= 0.164803
statistics sampled from 20053 (20065) to 20053 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.61), E-opt: 0.2 (0.235), width: 16
Scan time: 7.590
The best scores are: opt bits E(85289)
XP_005253216 (OMIM: 603312) PREDICTED: gamma-butyr ( 387) 2656 640.2 2.5e-183
XP_016873892 (OMIM: 603312) PREDICTED: gamma-butyr ( 387) 2656 640.2 2.5e-183
XP_005253218 (OMIM: 603312) PREDICTED: gamma-butyr ( 387) 2656 640.2 2.5e-183
NP_003977 (OMIM: 603312) gamma-butyrobetaine dioxy ( 387) 2656 640.2 2.5e-183
XP_005253217 (OMIM: 603312) PREDICTED: gamma-butyr ( 387) 2656 640.2 2.5e-183
XP_011518704 (OMIM: 603312) PREDICTED: gamma-butyr ( 387) 2656 640.2 2.5e-183
XP_011529484 (OMIM: 300777,300872) PREDICTED: trim ( 370) 589 148.7 2.1e-35
NP_060666 (OMIM: 300777,300872) trimethyllysine di ( 421) 586 148.0 3.8e-35
NP_001171726 (OMIM: 300777,300872) trimethyllysine ( 376) 431 111.2 4.3e-24
XP_016885109 (OMIM: 300777,300872) PREDICTED: trim ( 259) 309 82.1 1.7e-15
>>XP_005253216 (OMIM: 603312) PREDICTED: gamma-butyrobet (387 aa)
initn: 2656 init1: 2656 opt: 2656 Z-score: 3412.4 bits: 640.2 E(85289): 2.5e-183
Smith-Waterman score: 2656; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:1-387)
10 20 30 40 50 60
pF1KE1 MACTIQKAEALDGAHLMQILWYDEEESLYPAVWLRDNCPCSDCYLDSAKARKLLVEALDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MACTIQKAEALDGAHLMQILWYDEEESLYPAVWLRDNCPCSDCYLDSAKARKLLVEALDV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NIGIKGLIFDRKKVYITWPDEHYSEFQADWLKKRCFSKQARAKLQRELFFPECQYWGSEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NIGIKGLIFDRKKVYITWPDEHYSEFQADWLKKRCFSKQARAKLQRELFFPECQYWGSEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGEVSKLGKRMGFLYLTFYGHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGEVSKLGKRMGFLYLTFYGHT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 WQVQDKIDANNVAYTTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNVCQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 WQVQDKIDANNVAYTTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNVCQK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 LKKNNPQAFQILSSTFVDFTDIGVDYCDFSVQSKHKIIELDDKGQVVRINFNNATRDTIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LKKNNPQAFQILSSTFVDFTDIGVDYCDFSVQSKHKIIELDDKGQVVRINFNNATRDTIF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 DVPVERVQPFYAALKEFVDLMNSKESKFTFKMNPGDVITFDNWRLLHGRRSYEAGTEISR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DVPVERVQPFYAALKEFVDLMNSKESKFTFKMNPGDVITFDNWRLLHGRRSYEAGTEISR
310 320 330 340 350 360
370 380
pF1KE1 HLEGAYADWDVVMSRLRILRQRVENGN
:::::::::::::::::::::::::::
XP_005 HLEGAYADWDVVMSRLRILRQRVENGN
370 380
>>XP_016873892 (OMIM: 603312) PREDICTED: gamma-butyrobet (387 aa)
initn: 2656 init1: 2656 opt: 2656 Z-score: 3412.4 bits: 640.2 E(85289): 2.5e-183
Smith-Waterman score: 2656; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:1-387)
10 20 30 40 50 60
pF1KE1 MACTIQKAEALDGAHLMQILWYDEEESLYPAVWLRDNCPCSDCYLDSAKARKLLVEALDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MACTIQKAEALDGAHLMQILWYDEEESLYPAVWLRDNCPCSDCYLDSAKARKLLVEALDV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NIGIKGLIFDRKKVYITWPDEHYSEFQADWLKKRCFSKQARAKLQRELFFPECQYWGSEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NIGIKGLIFDRKKVYITWPDEHYSEFQADWLKKRCFSKQARAKLQRELFFPECQYWGSEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGEVSKLGKRMGFLYLTFYGHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGEVSKLGKRMGFLYLTFYGHT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 WQVQDKIDANNVAYTTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNVCQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WQVQDKIDANNVAYTTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNVCQK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 LKKNNPQAFQILSSTFVDFTDIGVDYCDFSVQSKHKIIELDDKGQVVRINFNNATRDTIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKKNNPQAFQILSSTFVDFTDIGVDYCDFSVQSKHKIIELDDKGQVVRINFNNATRDTIF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 DVPVERVQPFYAALKEFVDLMNSKESKFTFKMNPGDVITFDNWRLLHGRRSYEAGTEISR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DVPVERVQPFYAALKEFVDLMNSKESKFTFKMNPGDVITFDNWRLLHGRRSYEAGTEISR
310 320 330 340 350 360
370 380
pF1KE1 HLEGAYADWDVVMSRLRILRQRVENGN
:::::::::::::::::::::::::::
XP_016 HLEGAYADWDVVMSRLRILRQRVENGN
370 380
>>XP_005253218 (OMIM: 603312) PREDICTED: gamma-butyrobet (387 aa)
initn: 2656 init1: 2656 opt: 2656 Z-score: 3412.4 bits: 640.2 E(85289): 2.5e-183
Smith-Waterman score: 2656; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:1-387)
10 20 30 40 50 60
pF1KE1 MACTIQKAEALDGAHLMQILWYDEEESLYPAVWLRDNCPCSDCYLDSAKARKLLVEALDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MACTIQKAEALDGAHLMQILWYDEEESLYPAVWLRDNCPCSDCYLDSAKARKLLVEALDV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NIGIKGLIFDRKKVYITWPDEHYSEFQADWLKKRCFSKQARAKLQRELFFPECQYWGSEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NIGIKGLIFDRKKVYITWPDEHYSEFQADWLKKRCFSKQARAKLQRELFFPECQYWGSEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGEVSKLGKRMGFLYLTFYGHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGEVSKLGKRMGFLYLTFYGHT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 WQVQDKIDANNVAYTTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNVCQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 WQVQDKIDANNVAYTTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNVCQK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 LKKNNPQAFQILSSTFVDFTDIGVDYCDFSVQSKHKIIELDDKGQVVRINFNNATRDTIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LKKNNPQAFQILSSTFVDFTDIGVDYCDFSVQSKHKIIELDDKGQVVRINFNNATRDTIF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 DVPVERVQPFYAALKEFVDLMNSKESKFTFKMNPGDVITFDNWRLLHGRRSYEAGTEISR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DVPVERVQPFYAALKEFVDLMNSKESKFTFKMNPGDVITFDNWRLLHGRRSYEAGTEISR
310 320 330 340 350 360
370 380
pF1KE1 HLEGAYADWDVVMSRLRILRQRVENGN
:::::::::::::::::::::::::::
XP_005 HLEGAYADWDVVMSRLRILRQRVENGN
370 380
>>NP_003977 (OMIM: 603312) gamma-butyrobetaine dioxygena (387 aa)
initn: 2656 init1: 2656 opt: 2656 Z-score: 3412.4 bits: 640.2 E(85289): 2.5e-183
Smith-Waterman score: 2656; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:1-387)
10 20 30 40 50 60
pF1KE1 MACTIQKAEALDGAHLMQILWYDEEESLYPAVWLRDNCPCSDCYLDSAKARKLLVEALDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MACTIQKAEALDGAHLMQILWYDEEESLYPAVWLRDNCPCSDCYLDSAKARKLLVEALDV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NIGIKGLIFDRKKVYITWPDEHYSEFQADWLKKRCFSKQARAKLQRELFFPECQYWGSEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 NIGIKGLIFDRKKVYITWPDEHYSEFQADWLKKRCFSKQARAKLQRELFFPECQYWGSEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGEVSKLGKRMGFLYLTFYGHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGEVSKLGKRMGFLYLTFYGHT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 WQVQDKIDANNVAYTTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNVCQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 WQVQDKIDANNVAYTTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNVCQK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 LKKNNPQAFQILSSTFVDFTDIGVDYCDFSVQSKHKIIELDDKGQVVRINFNNATRDTIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LKKNNPQAFQILSSTFVDFTDIGVDYCDFSVQSKHKIIELDDKGQVVRINFNNATRDTIF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 DVPVERVQPFYAALKEFVDLMNSKESKFTFKMNPGDVITFDNWRLLHGRRSYEAGTEISR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DVPVERVQPFYAALKEFVDLMNSKESKFTFKMNPGDVITFDNWRLLHGRRSYEAGTEISR
310 320 330 340 350 360
370 380
pF1KE1 HLEGAYADWDVVMSRLRILRQRVENGN
:::::::::::::::::::::::::::
NP_003 HLEGAYADWDVVMSRLRILRQRVENGN
370 380
>>XP_005253217 (OMIM: 603312) PREDICTED: gamma-butyrobet (387 aa)
initn: 2656 init1: 2656 opt: 2656 Z-score: 3412.4 bits: 640.2 E(85289): 2.5e-183
Smith-Waterman score: 2656; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:1-387)
10 20 30 40 50 60
pF1KE1 MACTIQKAEALDGAHLMQILWYDEEESLYPAVWLRDNCPCSDCYLDSAKARKLLVEALDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MACTIQKAEALDGAHLMQILWYDEEESLYPAVWLRDNCPCSDCYLDSAKARKLLVEALDV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NIGIKGLIFDRKKVYITWPDEHYSEFQADWLKKRCFSKQARAKLQRELFFPECQYWGSEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NIGIKGLIFDRKKVYITWPDEHYSEFQADWLKKRCFSKQARAKLQRELFFPECQYWGSEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGEVSKLGKRMGFLYLTFYGHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGEVSKLGKRMGFLYLTFYGHT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 WQVQDKIDANNVAYTTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNVCQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 WQVQDKIDANNVAYTTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNVCQK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 LKKNNPQAFQILSSTFVDFTDIGVDYCDFSVQSKHKIIELDDKGQVVRINFNNATRDTIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LKKNNPQAFQILSSTFVDFTDIGVDYCDFSVQSKHKIIELDDKGQVVRINFNNATRDTIF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 DVPVERVQPFYAALKEFVDLMNSKESKFTFKMNPGDVITFDNWRLLHGRRSYEAGTEISR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DVPVERVQPFYAALKEFVDLMNSKESKFTFKMNPGDVITFDNWRLLHGRRSYEAGTEISR
310 320 330 340 350 360
370 380
pF1KE1 HLEGAYADWDVVMSRLRILRQRVENGN
:::::::::::::::::::::::::::
XP_005 HLEGAYADWDVVMSRLRILRQRVENGN
370 380
>>XP_011518704 (OMIM: 603312) PREDICTED: gamma-butyrobet (387 aa)
initn: 2656 init1: 2656 opt: 2656 Z-score: 3412.4 bits: 640.2 E(85289): 2.5e-183
Smith-Waterman score: 2656; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:1-387)
10 20 30 40 50 60
pF1KE1 MACTIQKAEALDGAHLMQILWYDEEESLYPAVWLRDNCPCSDCYLDSAKARKLLVEALDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MACTIQKAEALDGAHLMQILWYDEEESLYPAVWLRDNCPCSDCYLDSAKARKLLVEALDV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NIGIKGLIFDRKKVYITWPDEHYSEFQADWLKKRCFSKQARAKLQRELFFPECQYWGSEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NIGIKGLIFDRKKVYITWPDEHYSEFQADWLKKRCFSKQARAKLQRELFFPECQYWGSEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGEVSKLGKRMGFLYLTFYGHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGEVSKLGKRMGFLYLTFYGHT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 WQVQDKIDANNVAYTTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNVCQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WQVQDKIDANNVAYTTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNVCQK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 LKKNNPQAFQILSSTFVDFTDIGVDYCDFSVQSKHKIIELDDKGQVVRINFNNATRDTIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKKNNPQAFQILSSTFVDFTDIGVDYCDFSVQSKHKIIELDDKGQVVRINFNNATRDTIF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 DVPVERVQPFYAALKEFVDLMNSKESKFTFKMNPGDVITFDNWRLLHGRRSYEAGTEISR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DVPVERVQPFYAALKEFVDLMNSKESKFTFKMNPGDVITFDNWRLLHGRRSYEAGTEISR
310 320 330 340 350 360
370 380
pF1KE1 HLEGAYADWDVVMSRLRILRQRVENGN
:::::::::::::::::::::::::::
XP_011 HLEGAYADWDVVMSRLRILRQRVENGN
370 380
>>XP_011529484 (OMIM: 300777,300872) PREDICTED: trimethy (370 aa)
initn: 530 init1: 223 opt: 589 Z-score: 756.7 bits: 148.7 E(85289): 2.1e-35
Smith-Waterman score: 589; 28.1% identity (61.5% similar) in 366 aa overlap (16-379:7-366)
10 20 30 40 50 60
pF1KE1 MACTIQKAEALDGAHLMQILWYDEEESLYPAVWLRDNCPCSDCYLDSAKARKLLVEALDV
. : : : . . :::::.: ..:: .... :.: . ..:.
XP_011 MWVIKEMNQELKYANTVMRFDYVWLRDHCRSASCYNSKTHQRSLDTASVDL
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 NIGIKGLIFDRKKVYITWPDEHYSEFQADWLKKRCFSKQARAKLQRELFFPECQYWGSEL
: : . .:. ...:::: : .... .:: : . : . .: .... : ..
XP_011 CIKPKTIRLDETTLFFTWPDGHVTKYDLNWLVKNSYEGQKQKVIQPRILWNAEIY--QQA
60 70 80 90 100
130 140 150 160 170 180
pF1KE1 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGEVSKLGKRMGFLYLTFYGHT
:.:..: .. :. .: :.:... ::. . .. .. ::..:.... :.::.
XP_011 QVPSVDCQSFLETNEGLKKFLQNFLLYGIAFVENVPPTQEHTEKLAERISLIRETIYGRM
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE1 WQVQDKIDANNVAYTTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNVCQK
: . .. ...::: :. ::: ...: :.:..::.:. ::: . .:::: . ..
XP_011 WYFTSDFSRGDTAYTKLALDRHTDTTYFQEPCGIQVFHCLKHEGTGGRTLLVDGFYAAEQ
170 180 190 200 210 220
250 260 270 280 290
pF1KE1 LKKNNPQAFQILSSTFVDFTDI-GVDYCDFSVQSKHKIIELDD-KGQVVRINFNNATRDT
. .. :. :..::.. . : : : . . .... . .. : .:: : .
XP_011 VLQKAPEEFELLSKVPLKHEYIEDVGECHNHMIGIGPVLNIYPWNKELYLIRYNNYDRAV
230 240 250 260 270 280
300 310 320 330 340 350
pF1KE1 IFDVPVERVQPFYAALKEFVDLMNSKESKFTFKMNPGDVITFDNWRLLHGRRSYEAGTEI
: :: . :. .:.: . .. . :..: :..:: :. .::::.::::. . .
XP_011 INTVPYDVVHRWYTAHRTLTIELRRPENEFWVKLKPGRVLFIDNWRVLHGRECFTG----
290 300 310 320 330 340
360 370 380
pF1KE1 SRHLEGAYADWDVVMSRLRILRQRVENGN
:.: : : : :.. :.:
XP_011 YRQLCGCYLTRDDVLNTARLLGLQA
350 360 370
>>NP_060666 (OMIM: 300777,300872) trimethyllysine dioxyg (421 aa)
initn: 530 init1: 223 opt: 586 Z-score: 751.9 bits: 148.0 E(85289): 3.8e-35
Smith-Waterman score: 586; 28.3% identity (62.3% similar) in 353 aa overlap (29-379:71-417)
10 20 30 40 50
pF1KE1 MACTIQKAEALDGAHLMQILWYDEEESLYPAVWLRDNCPCSDCYLDSAKARKLLVEAL
. :::::.: ..:: .... :.: . ..
NP_060 WHHTASKSLTCAWQQHEDHFELKYANTVMRFDYVWLRDHCRSASCYNSKTHQRSLDTASV
50 60 70 80 90 100
60 70 80 90 100 110
pF1KE1 DVNIGIKGLIFDRKKVYITWPDEHYSEFQADWLKKRCFSKQARAKLQRELFFPECQYWGS
:. : : . .:. ...:::: : .... .:: : . : . .: .... : .
NP_060 DLCIKPKTIRLDETTLFFTWPDGHVTKYDLNWLVKNSYEGQKQKVIQPRILWNAEIY--Q
110 120 130 140 150
120 130 140 150 160 170
pF1KE1 ELQLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGEVSKLGKRMGFLYLTFYG
. :.:..: .. :. .: :.:... ::. . .. .. ::..:.... :.::
NP_060 QAQVPSVDCQSFLETNEGLKKFLQNFLLYGIAFVENVPPTQEHTEKLAERISLIRETIYG
160 170 180 190 200 210
180 190 200 210 220 230
pF1KE1 HTWQVQDKIDANNVAYTTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNVC
. : . .. ...::: :. ::: ...: :.:..::.:. ::: . .:::: .
NP_060 RMWYFTSDFSRGDTAYTKLALDRHTDTTYFQEPCGIQVFHCLKHEGTGGRTLLVDGFYAA
220 230 240 250 260 270
240 250 260 270 280 290
pF1KE1 QKLKKNNPQAFQILSSTFVDFTDI-GVDYCDFSVQSKHKIIELDD-KGQVVRINFNNATR
... .. :. :..::.. . : : : . . .... . .. : .:: :
NP_060 EQVLQKAPEEFELLSKVPLKHEYIEDVGECHNHMIGIGPVLNIYPWNKELYLIRYNNYDR
280 290 300 310 320 330
300 310 320 330 340 350
pF1KE1 DTIFDVPVERVQPFYAALKEFVDLMNSKESKFTFKMNPGDVITFDNWRLLHGRRSYEAGT
.: :: . :. .:.: . .. . :..: :..:: :. .::::.::::. . .
NP_060 AVINTVPYDVVHRWYTAHRTLTIELRRPENEFWVKLKPGRVLFIDNWRVLHGRECFTG--
340 350 360 370 380 390
360 370 380
pF1KE1 EISRHLEGAYADWDVVMSRLRILRQRVENGN
:.: : : : :.. :.:
NP_060 --YRQLCGCYLTRDDVLNTARLLGLQA
400 410 420
>>NP_001171726 (OMIM: 300777,300872) trimethyllysine dio (376 aa)
initn: 392 init1: 223 opt: 431 Z-score: 553.5 bits: 111.2 E(85289): 4.3e-24
Smith-Waterman score: 431; 28.9% identity (66.2% similar) in 225 aa overlap (29-253:71-293)
10 20 30 40 50
pF1KE1 MACTIQKAEALDGAHLMQILWYDEEESLYPAVWLRDNCPCSDCYLDSAKARKLLVEAL
. :::::.: ..:: .... :.: . ..
NP_001 WHHTASKSLTCAWQQHEDHFELKYANTVMRFDYVWLRDHCRSASCYNSKTHQRSLDTASV
50 60 70 80 90 100
60 70 80 90 100 110
pF1KE1 DVNIGIKGLIFDRKKVYITWPDEHYSEFQADWLKKRCFSKQARAKLQRELFFPECQYWGS
:. : : . .:. ...:::: : .... .:: : . : . .: .... : .
NP_001 DLCIKPKTIRLDETTLFFTWPDGHVTKYDLNWLVKNSYEGQKQKVIQPRILWNAEIY--Q
110 120 130 140 150
120 130 140 150 160 170
pF1KE1 ELQLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGEVSKLGKRMGFLYLTFYG
. :.:..: .. :. .: :.:... ::. . .. .. ::..:.... :.::
NP_001 QAQVPSVDCQSFLETNEGLKKFLQNFLLYGIAFVENVPPTQEHTEKLAERISLIRETIYG
160 170 180 190 200 210
180 190 200 210 220 230
pF1KE1 HTWQVQDKIDANNVAYTTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNVC
. : . .. ...::: :. ::: ...: :.:..::.:. ::: . .:::: .
NP_001 RMWYFTSDFSRGDTAYTKLALDRHTDTTYFQEPCGIQVFHCLKHEGTGGRTLLVDGFYAA
220 230 240 250 260 270
240 250 260 270 280 290
pF1KE1 QKLKKNNPQAFQILSSTFVDFTDIGVDYCDFSVQSKHKIIELDDKGQVVRINFNNATRDT
... .. :. :..::
NP_001 EQVLQKAPEEFELLSKVPLKHEYIEDVGECHNHMIGIGPVLNIYPWNKELYLIRLFKEKQ
280 290 300 310 320 330
>>XP_016885109 (OMIM: 300777,300872) PREDICTED: trimethy (259 aa)
initn: 259 init1: 183 opt: 309 Z-score: 399.4 bits: 82.1 E(85289): 1.7e-15
Smith-Waterman score: 309; 27.0% identity (63.8% similar) in 185 aa overlap (29-213:71-253)
10 20 30 40 50
pF1KE1 MACTIQKAEALDGAHLMQILWYDEEESLYPAVWLRDNCPCSDCYLDSAKARKLLVEAL
. :::::.: ..:: .... :.: . ..
XP_016 WHHTASKSLTCAWQQHEDHFELKYANTVMRFDYVWLRDHCRSASCYNSKTHQRSLDTASV
50 60 70 80 90 100
60 70 80 90 100 110
pF1KE1 DVNIGIKGLIFDRKKVYITWPDEHYSEFQADWLKKRCFSKQARAKLQRELFFPECQYWGS
:. : : . .:. ...:::: : .... .:: : . : . .: .... : .
XP_016 DLCIKPKTIRLDETTLFFTWPDGHVTKYDLNWLVKNSYEGQKQKVIQPRILWNAEIY--Q
110 120 130 140 150
120 130 140 150 160 170
pF1KE1 ELQLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGEVSKLGKRMGFLYLTFYG
. :.:..: .. :. .: :.:... ::. . .. .. ::..:.... :.::
XP_016 QAQVPSVDCQSFLETNEGLKKFLQNFLLYGIAFVENVPPTQEHTEKLAERISLIRETIYG
160 170 180 190 200 210
180 190 200 210 220 230
pF1KE1 HTWQVQDKIDANNVAYTTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNVC
. : . .. ...::: :. ::: ...: :
XP_016 RMWYFTSDFSRGDTAYTKLALDRHTDTTYFQEPCGFLAFSY
220 230 240 250
240 250 260 270 280 290
pF1KE1 QKLKKNNPQAFQILSSTFVDFTDIGVDYCDFSVQSKHKIIELDDKGQVVRINFNNATRDT
387 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 07:41:13 2016 done: Sat Nov 5 07:41:14 2016
Total Scan time: 7.590 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]