FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0977, 571 aa
  1>>>pF1KE0977 571 - 571 aa - 571 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.1218+/-0.000943; mu= 6.0002+/- 0.055
 mean_var=258.5495+/-56.364, 0's: 0 Z-trim(112.3): 622  B-trim: 0 in 0/52
 Lambda= 0.079763
 statistics sampled from 12339 (13089) to 12339 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.749), E-opt: 0.2 (0.402), width:  16
 Scan time:  3.950

The best scores are:                                      opt bits E(32554)
CCDS41323.1 TESK2 gene_id:10420|Hs108|chr1         ( 571) 3899 462.5 6.2e-130
CCDS6580.1 TESK1 gene_id:7016|Hs108|chr9           ( 626) 1336 167.6   4e-41


>>CCDS41323.1 TESK2 gene_id:10420|Hs108|chr1              (571 aa)
 initn: 3899 init1: 3899 opt: 3899  Z-score: 2446.1  bits: 462.5 E(32554): 6.2e-130
Smith-Waterman score: 3899; 100.0% identity (100.0% similar) in 571 aa overlap (1-571:1-571)

               10        20        30        40        50        60
pF1KE0 MDRSKRNSIAGFPPRVERLEEFEGGGGGEGNVSQVGRVWPSSYRALISAFSRLTRLDDFT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MDRSKRNSIAGFPPRVERLEEFEGGGGGEGNVSQVGRVWPSSYRALISAFSRLTRLDDFT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 CEKIGSGFFSEVFKVRHRASGQVMALKMNTLSSNRANMLKEVQLMNRLSHPNILRFMGVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 CEKIGSGFFSEVFKVRHRASGQVMALKMNTLSSNRANMLKEVQLMNRLSHPNILRFMGVC
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 VHQGQLHALTEYINSGNLEQLLDSNLHLPWTVRVKLAYDIAVGLSYLHFKGIFHRDLTSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 VHQGQLHALTEYINSGNLEQLLDSNLHLPWTVRVKLAYDIAVGLSYLHFKGIFHRDLTSK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 NCLIKRDENGYSAVVADFGLAEKIPDVSMGSEKLAVVGSPFWMAPEVLRDEPYNEKADVF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 NCLIKRDENGYSAVVADFGLAEKIPDVSMGSEKLAVVGSPFWMAPEVLRDEPYNEKADVF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 SYGIILCEIIARIQADPDYLPRTENFGLDYDAFQHMVGDCPPDFLQLTFNCCNMDPKLRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SYGIILCEIIARIQADPDYLPRTENFGLDYDAFQHMVGDCPPDFLQLTFNCCNMDPKLRP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 SFVEIGKTLEEILSRLQEEEQERDRKLQPTARGLLEKAPGVKRLSSLDDKIPHKSPCPRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SFVEIGKTLEEILSRLQEEEQERDRKLQPTARGLLEKAPGVKRLSSLDDKIPHKSPCPRR
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 TIWLSRSQSDIFSRKPPRTVSVLDPYYRPRDGAARTPKVNPFSARQDLMGGKIKFFDLPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 TIWLSRSQSDIFSRKPPRTVSVLDPYYRPRDGAARTPKVNPFSARQDLMGGKIKFFDLPS
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE0 KSVISLVFDLDAPGPGTMPLADWQEPLAPPIRRWRSLPGSPEFLHQEACPFVGREESLSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 KSVISLVFDLDAPGPGTMPLADWQEPLAPPIRRWRSLPGSPEFLHQEACPFVGREESLSD
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE0 GPPPRLSSLKYRVKEIPPFRASALPAAQAHEAMDCSILQEENGFGSRPQGTSPCPAGASE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GPPPRLSSLKYRVKEIPPFRASALPAAQAHEAMDCSILQEENGFGSRPQGTSPCPAGASE
              490       500       510       520       530       540

              550       560       570 
pF1KE0 EMEVEERPAGSTPATFSTSGIGLQTQGKQDG
       :::::::::::::::::::::::::::::::
CCDS41 EMEVEERPAGSTPATFSTSGIGLQTQGKQDG
              550       560       570 

>>CCDS6580.1 TESK1 gene_id:7016|Hs108|chr9                (626 aa)
 initn: 1189 init1: 752 opt: 1336  Z-score: 851.7  bits: 167.6 E(32554): 4e-41
Smith-Waterman score: 1547; 54.2% identity (68.8% similar) in 509 aa overlap (25-516:25-500)

               10        20        30        40        50        60
pF1KE0 MDRSKRNSIAGFPPRVERLEEFEGGGGGEGNVSQVGRVWPSSYRALISAFSRLTRLDDFT
                               : :: :.    ::  ::::::: :: : :.:.::: 
CCDS65 MAGERPPLRGPGPGPGEVPGEGPPGPGGTGGGPGRGR--PSSYRALRSAVSSLARVDDFH
               10        20        30          40        50        

                70        80        90       100       110         
pF1KE0 C-EKIGSGFFSEVFKVRHRASGQVMALKMNTLSSNRANMLKEVQLMNRLSHPNILRFMGV
       : ::::.::::::.::::: :::::.:::: : :::.: :.:::::::: ::::::::::
CCDS65 CAEKIGAGFFSEVYKVRHRQSGQVMVLKMNKLPSNRGNTLREVQLMNRLRHPNILRFMGV
       60        70        80        90       100       110        

     120       130       140       150       160       170         
pF1KE0 CVHQGQLHALTEYINSGNLEQLLDSNLHLPWTVRVKLAYDIAVGLSYLHFKGIFHRDLTS
       :::::::::::::.:.:.:::::.:   : : ::..:: ::: :: ::: ::.:::::::
CCDS65 CVHQGQLHALTEYMNGGTLEQLLSSPEPLSWPVRLHLALDIARGLRYLHSKGVFHRDLTS
      120       130       140       150       160       170        

     180       190       200       210         220       230       
pF1KE0 KNCLIKRDENGYSAVVADFGLAEKIPDVSMGSEK--LAVVGSPFWMAPEVLRDEPYNEKA
       ::::..:.. :..:::.:::::::::    :..:  :::::::.:::::::: : :.:::
CCDS65 KNCLVRREDRGFTAVVGDFGLAEKIPVYREGARKEPLAVVGSPYWMAPEVLRGELYDEKA
      180       190       200       210       220       230        

       240       250       260       270        280       290      
pF1KE0 DVFSYGIILCEIIARIQADPDYLPRTENFGLDYDAFQHMVGD-CPPDFLQLTFNCCNMDP
       :::..::.:::.:::. ::::::::::.::::  ::. .::: ::  :: :...:::..:
CCDS65 DVFAFGIVLCELIARVPADPDYLPRTEDFGLDVPAFRTLVGDDCPLPFLLLAIHCCNLEP
      240       250       260       270       280       290        

        300       310       320       330       340       350      
pF1KE0 KLRPSFVEIGKTLEEILSRLQEEEQERDRKLQPTARGLLEKAPGVKRLSSLDDKIPHKSP
       . :  :.:: . :: :: .: :          : .:  : .  :    .. .  .:.  :
CCDS65 STRAPFTEITQHLEWILEQLPEPA--------PLTRTALTHNQGSVARGGPSATLPR--P
      300       310       320               330       340          

        360       370       380       390       400       410      
pF1KE0 CPRRTIWLSRSQSDIFSRKPPRTVSVLDPYYRPRDGAARTPKVNPFSARQDLMGGKIKFF
        ::    ::::.::.:   ::      .:   :  :   : .::::: :.:: :::::..
CCDS65 DPR----LSRSRSDLFL--PP------SPESPPNWGDNLT-RVNPFSLREDLRGGKIKLL
      350           360               370        380       390     

        420       430        440          450       460       470  
pF1KE0 DLPSKSVISLVFDLDAPGPGT-MPLADWQEPLA-P--PIRRWRSLPGSPEFLHQEACPFV
       : ::: :. ::    .: :.: .::.   : :. :  : :: ::::.:::. ..    . 
CCDS65 DTPSKPVLPLVP--PSPFPSTQLPLVTTPETLVQPGTPARRCRSLPSSPELPRRMETALP
         400         410       420       430       440       450   

            480       490              500       510         520   
pF1KE0 GREESLSDGPPPRLSSLKYRVK-------EIPPFRASALPAAQAHEAM--DCSILQEENG
       :       :::    : . ...         ::  :  :: : : . .   ::       
CCDS65 G------PGPPAVGPSAEEKMECEGSSPEPEPPGPAPQLPLAVATDNFISTCSSASQPWS
                 460       470       480       490       500       

           530       540       550       560       570             
pF1KE0 FGSRPQGTSPCPAGASEEMEVEERPAGSTPATFSTSGIGLQTQGKQDG            
                                                                   
CCDS65 PRSGPVLNNNPPAVVVNSPQGWAGEPWNRAQHSLPRAAALERTEPSPPPSAPREPDEGLP
       510       520       530       540       550       560       




571 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 04:46:22 2016 done: Sat Nov  5 04:46:22 2016
 Total Scan time:  3.950 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]