Result of FASTA (ccds) for
pF1KE0941
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0941, 268 aa
1>>>pF1KE0941 268 - 268 aa - 268 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.4253+/-0.00109; mu= 3.5810+/- 0.062
mean_var=185.6042+/-42.063, 0's: 0 Z-trim(108.8): 649 B-trim: 197 in 1/49
Lambda= 0.094141
statistics sampled from 9696 (10432) to 9696 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.701), E-opt: 0.2 (0.32), width: 16
Scan time: 2.180
The best scores are: opt bits E(32554)
CCDS362.1 TSSK3 gene_id:81629|Hs108|chr1 ( 268) 1825 260.3 9.9e-70
CCDS13755.1 TSSK2 gene_id:23617|Hs108|chr22 ( 358) 893 133.9 1.5e-31
CCDS4112.1 TSSK1B gene_id:83942|Hs108|chr5 ( 367) 866 130.2 2e-30
CCDS12403.1 TSSK6 gene_id:83983|Hs108|chr19 ( 273) 820 123.9 1.2e-28
CCDS73034.1 MARK1 gene_id:4139|Hs108|chr1 ( 780) 665 103.3 5.6e-22
CCDS31029.2 MARK1 gene_id:4139|Hs108|chr1 ( 795) 665 103.3 5.7e-22
CCDS73033.1 MARK1 gene_id:4139|Hs108|chr1 ( 796) 665 103.3 5.7e-22
CCDS55947.1 MARK3 gene_id:4140|Hs108|chr14 ( 713) 644 100.4 3.8e-21
CCDS41993.1 MARK3 gene_id:4140|Hs108|chr14 ( 729) 644 100.4 3.8e-21
CCDS45166.1 MARK3 gene_id:4140|Hs108|chr14 ( 744) 644 100.4 3.9e-21
CCDS45165.1 MARK3 gene_id:4140|Hs108|chr14 ( 753) 644 100.4 3.9e-21
CCDS33575.1 SIK1 gene_id:150094|Hs108|chr21 ( 783) 638 99.6 7.1e-21
CCDS82645.1 LOC102724428 gene_id:102724428|Hs108|c ( 783) 638 99.6 7.1e-21
CCDS53651.1 MARK2 gene_id:2011|Hs108|chr11 ( 709) 634 99.0 9.7e-21
CCDS53650.1 MARK2 gene_id:2011|Hs108|chr11 ( 719) 634 99.0 9.8e-21
CCDS8051.2 MARK2 gene_id:2011|Hs108|chr11 ( 724) 634 99.0 9.8e-21
CCDS41665.1 MARK2 gene_id:2011|Hs108|chr11 ( 745) 634 99.0 1e-20
CCDS53649.1 MARK2 gene_id:2011|Hs108|chr11 ( 788) 634 99.1 1e-20
CCDS60974.1 SIK3 gene_id:23387|Hs108|chr11 (1261) 637 99.7 1.1e-20
CCDS8379.2 SIK3 gene_id:23387|Hs108|chr11 (1321) 637 99.7 1.1e-20
CCDS12658.1 MARK4 gene_id:57787|Hs108|chr19 ( 688) 624 97.6 2.4e-20
CCDS56097.1 MARK4 gene_id:57787|Hs108|chr19 ( 752) 624 97.7 2.6e-20
CCDS8347.1 SIK2 gene_id:23235|Hs108|chr11 ( 926) 623 97.6 3.3e-20
CCDS59123.1 MELK gene_id:9833|Hs108|chr9 ( 610) 598 94.1 2.6e-19
CCDS6606.1 MELK gene_id:9833|Hs108|chr9 ( 651) 598 94.1 2.7e-19
CCDS31892.1 NUAK1 gene_id:9891|Hs108|chr12 ( 661) 591 93.1 5.3e-19
CCDS43075.1 SNRK gene_id:54861|Hs108|chr3 ( 765) 592 93.3 5.3e-19
CCDS12921.1 BRSK1 gene_id:84446|Hs108|chr19 ( 778) 579 91.6 1.8e-18
CCDS3932.2 PRKAA1 gene_id:5562|Hs108|chr5 ( 559) 575 90.9 2.1e-18
CCDS41590.1 BRSK2 gene_id:9024|Hs108|chr11 ( 668) 576 91.1 2.2e-18
CCDS58106.1 BRSK2 gene_id:9024|Hs108|chr11 ( 674) 576 91.1 2.2e-18
CCDS58107.1 BRSK2 gene_id:9024|Hs108|chr11 ( 736) 576 91.2 2.3e-18
CCDS605.1 PRKAA2 gene_id:5563|Hs108|chr1 ( 552) 568 89.9 4.1e-18
CCDS1453.2 NUAK2 gene_id:81788|Hs108|chr1 ( 672) 562 89.2 8.2e-18
CCDS58108.1 BRSK2 gene_id:9024|Hs108|chr11 ( 766) 546 87.1 4e-17
CCDS59126.1 MELK gene_id:9833|Hs108|chr9 ( 619) 536 85.6 8.9e-17
CCDS13610.1 HUNK gene_id:30811|Hs108|chr21 ( 714) 526 84.3 2.5e-16
CCDS60696.1 BRSK2 gene_id:9024|Hs108|chr11 ( 614) 517 83.1 5.3e-16
CCDS3943.1 NIM1K gene_id:167359|Hs108|chr5 ( 436) 510 82.0 8.1e-16
CCDS7092.1 CAMK1D gene_id:57118|Hs108|chr10 ( 357) 500 80.5 1.8e-15
CCDS7091.1 CAMK1D gene_id:57118|Hs108|chr10 ( 385) 500 80.5 1.9e-15
CCDS13843.1 CHEK2 gene_id:11200|Hs108|chr22 ( 543) 497 80.3 3.2e-15
CCDS33629.1 CHEK2 gene_id:11200|Hs108|chr22 ( 586) 497 80.3 3.4e-15
CCDS2582.1 CAMK1 gene_id:8536|Hs108|chr3 ( 370) 491 79.3 4.3e-15
CCDS10851.1 PSKH1 gene_id:5681|Hs108|chr16 ( 424) 490 79.2 5.2e-15
CCDS34076.1 DCLK2 gene_id:166614|Hs108|chr4 ( 766) 486 78.9 1.1e-14
CCDS47142.2 DCLK2 gene_id:166614|Hs108|chr4 ( 783) 486 79.0 1.2e-14
CCDS43064.1 DCLK3 gene_id:85443|Hs108|chr3 ( 648) 484 78.6 1.2e-14
CCDS65789.1 MARK1 gene_id:4139|Hs108|chr1 ( 758) 474 77.3 3.5e-14
CCDS76779.1 ULK3 gene_id:25989|Hs108|chr15 ( 470) 469 76.4 4e-14
>>CCDS362.1 TSSK3 gene_id:81629|Hs108|chr1 (268 aa)
initn: 1825 init1: 1825 opt: 1825 Z-score: 1365.4 bits: 260.3 E(32554): 9.9e-70
Smith-Waterman score: 1825; 100.0% identity (100.0% similar) in 268 aa overlap (1-268:1-268)
10 20 30 40 50 60
pF1KE0 MEDFLLSNGYQLGKTIGEGTYSKVKEAFSKKHQRKVAIKVIDKMGGPEEFIQRFLPRELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 MEDFLLSNGYQLGKTIGEGTYSKVKEAFSKKHQRKVAIKVIDKMGGPEEFIQRFLPRELQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 IVRTLDHKNIIQVYEMLESADGKICLVMELAEGGDVFDCVLNGGPLPESRAKALFRQMVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 IVRTLDHKNIIQVYEMLESADGKICLVMELAEGGDVFDCVLNGGPLPESRAKALFRQMVE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AIRYCHGCGVAHRDLKCENALLQGFNLKLTDFGFAKVLPKSHRELSQTFCGSTAYAAPEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 AIRYCHGCGVAHRDLKCENALLQGFNLKLTDFGFAKVLPKSHRELSQTFCGSTAYAAPEV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LQGIPHDSKKGDVWSMGVVLYVMLCASLPFDDTDIPKMLWQQQKGVSFPTHLSISADCQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 LQGIPHDSKKGDVWSMGVVLYVMLCASLPFDDTDIPKMLWQQQKGVSFPTHLSISADCQD
190 200 210 220 230 240
250 260
pF1KE0 LLKRLLEPDMILRPSIEEVSWHPWLAST
::::::::::::::::::::::::::::
CCDS36 LLKRLLEPDMILRPSIEEVSWHPWLAST
250 260
>>CCDS13755.1 TSSK2 gene_id:23617|Hs108|chr22 (358 aa)
initn: 843 init1: 458 opt: 893 Z-score: 679.7 bits: 133.9 E(32554): 1.5e-31
Smith-Waterman score: 893; 47.4% identity (77.9% similar) in 272 aa overlap (1-265:1-272)
10 20 30 40 50
pF1KE0 MED--FLLSNGYQLGKTIGEGTYSKVKEAFSKKHQRKVAIKVIDKMGGPEEFIQRFLPRE
:.: : ..:: .: ..:.:.:.::: :.:.. . .::.:.::. : .:..::::::
CCDS13 MDDATVLRKKGYIVGINLGKGSYAKVKSAYSERLKFNVAVKIIDRKKTPTDFVERFLPRE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LQIVRTLDHKNIIQVYEMLESADGKICLVMELAEGGDVFDCVLNGGPLPESRAKALFRQM
..:. :..: .::..::..:..::.: ..:::. ::... . : : :. :. .:::.
CCDS13 MDILATVNHGSIIKTYEIFETSDGRIYIIMELGVQGDLLEFIKCQGALHEDVARKMFRQL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 VEAIRYCHGCGVAHRDLKCENALL-QGFNLKLTDFGFAK-VLPKSHRE--LSQTFCGSTA
:..::: ..:::::::: :: . ::.::.::::.: : :. . ::.:::::.:
CCDS13 SSAVKYCHDLDIVHRDLKCENLLLDKDFNIKLSDFGFSKRCLRDSNGRIILSKTFCGSAA
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 YAAPEVLQGIPHDSKKGDVWSMGVVLYVMLCASLPFDDTDIPKMLW-QQQKGVSFPTHLS
::::::::.::.. : :.::.::.::.:.:.:.:.::.:: ::: :... :.:: .
CCDS13 YAAPEVLQSIPYQPKVYDIWSLGVILYIMVCGSMPYDDSDIRKMLRIQKEHRVDFPRSKN
190 200 210 220 230 240
240 250 260
pF1KE0 ISADCQDLLKRLLEPDMILRPSIEEVSWHPWLAST
.. .:.::. :.:.::. : :.:. : ::
CCDS13 LTCECKDLIYRMLQPDVSQRLHIDEILSHSWLQPPKPKATSSASFKREGEGKYRAECKLD
250 260 270 280 290 300
CCDS13 TKTGLRPDHRPDHKLGAKTQHRLLVVPENENRMEDRLAETSRAKDHHISGAEVGKAST
310 320 330 340 350
>>CCDS4112.1 TSSK1B gene_id:83942|Hs108|chr5 (367 aa)
initn: 825 init1: 447 opt: 866 Z-score: 659.7 bits: 130.2 E(32554): 2e-30
Smith-Waterman score: 866; 47.4% identity (76.5% similar) in 272 aa overlap (1-265:1-272)
10 20 30 40 50
pF1KE0 MED--FLLSNGYQLGKTIGEGTYSKVKEAFSKKHQRKVAIKVIDKMGGPEEFIQRFLPRE
:.: : :: :: ..:::.:.::: :.:.. . .::::.::. .: .:...:::::
CCDS41 MDDAAVLKRRGYLLGINLGEGSYAKVKSAYSERLKFNVAIKIIDRKKAPADFLEKFLPRE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LQIVRTLDHKNIIQVYEMLESADGKICLVMELAEGGDVFDCVLNGGPLPESRAKALFRQM
..:. :.: .::..::..:.. ::. .::::: ::... . . : : :..:. :.:.
CCDS41 IEILAMLNHCSIIKTYEIFETSHGKVYIVMELAVQGDLLELIKTRGALHEDEARKKFHQL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 VEAIRYCHGCGVAHRDLKCENALL-QGFNLKLTDFGFAK--VLPKSHR-ELSQTFCGSTA
::.::: :.::::::.: :: . ::.::.::.:.: . : : ::.::::: :
CCDS41 SLAIKYCHDLDVVHRDLKCDNLLLDKDFNIKLSDFSFSKRCLRDDSGRMALSKTFCGSPA
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 YAAPEVLQGIPHDSKKGDVWSMGVVLYVMLCASLPFDDTDIPKMLW-QQQKGVSFPTHLS
:::::::::::.. : :.::.::.::.:.:.:.:.::..: ::: :... :.::
CCDS41 YAAPEVLQGIPYQPKVYDIWSLGVILYIMVCGSMPYDDSNIKKMLRIQKEHRVNFPRSKH
190 200 210 220 230 240
240 250 260
pF1KE0 ISADCQDLLKRLLEPDMILRPSIEEVSWHPWLAST
....:.::. ..:.::. : :.:. : :.
CCDS41 LTGECKDLIYHMLQPDVNRRLHIDEILSHCWMQPKARGSPSVAINKEGESSRGTEPLWTP
250 260 270 280 290 300
CCDS41 EPGSDKKSATKLEPEGEAQPQAQPETKPEGTAMQMSRQSEILGFPSKPSTMETEEGPPQQ
310 320 330 340 350 360
>>CCDS12403.1 TSSK6 gene_id:83983|Hs108|chr19 (273 aa)
initn: 551 init1: 551 opt: 820 Z-score: 627.6 bits: 123.9 E(32554): 1.2e-28
Smith-Waterman score: 820; 49.2% identity (75.2% similar) in 266 aa overlap (3-265:4-267)
10 20 30 40 50
pF1KE0 MEDFLLSN-GYQLGKTIGEGTYSKVKEAFSKKHQRKVAIKVIDKMGGPEEFIQRFLPRE
: :::. ::.::.:::::.::::: : :::.. :::::.:. .: .:...:::::
CCDS12 MSGDKLLSELGYKLGRTIGEGSYSKVKVATSKKYKGTVAIKVVDRRRAPPDFVNKFLPRE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LQIVRTLDHKNIIQVYEMLESADGKICLVMELAEGGDVFDCVLNGGPLPESRAKALFRQM
:.:.: . : .:..:.:..: .::. .::: : . :... : .: .: .:. :: :.
CCDS12 LSILRGVRHPHIVHVFEFIEVCNGKLYIVME-AAATDLLQAVQRNGRIPGVQARDLFAQI
70 80 90 100 110
120 130 140 150 160 170
pF1KE0 VEAIRYCHGCGVAHRDLKCENALLQG--FNLKLTDFGFAKVLPKSHRELSQTFCGSTAYA
. :.:: : ..::::::::.::. .:::::::.. ... .:: :.:::.:::
CCDS12 AGAVRYLHDHHLVHRDLKCENVLLSPDERRVKLTDFGFGR-QAHGYPDLSTTYCGSAAYA
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 APEVLQGIPHDSKKGDVWSMGVVLYVMLCASLPFDDTDIPKMLWQQQKGVSFPTHLSISA
.:::: :::.: :: ::::::::::::. . .::::.:: . .:..:: .: : .:
CCDS12 SPEVLLGIPYDPKKYDVWSMGVVLYVMVTGCMPFDDSDIAGLPRRQKRGVLYPEGLELSE
180 190 200 210 220 230
240 250 260
pF1KE0 DCQDLLKRLLEPDMILRPSIEEVSWHPWLAST
:. :. .::. . ::: .:. . ::
CCDS12 RCKALIAELLQFSPSARPSAGQVARNCWLRAGDSG
240 250 260 270
>>CCDS73034.1 MARK1 gene_id:4139|Hs108|chr1 (780 aa)
initn: 538 init1: 213 opt: 665 Z-score: 508.1 bits: 103.3 E(32554): 5.6e-22
Smith-Waterman score: 665; 41.2% identity (72.4% similar) in 257 aa overlap (10-265:60-311)
10 20 30
pF1KE0 MEDFLLSNGYQLGKTIGEGTYSKVKEAFSKKHQRKVAIK
:.: ::::.:...::: : :.::.:
CCDS73 QPTKSSSRQNIPRCRNSITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVK
30 40 50 60 70 80
40 50 60 70 80 90
pF1KE0 VIDKMGGPEEFIQRFLPRELQIVRTLDHKNIIQVYEMLESADGKICLVMELAEGGDVFDC
.::: .:... ::..:.. :.: ::....:..:. . . :::: : ::.:::
CCDS73 IIDKTQLNPTSLQKLF-REVRIMKILNHPNIVKLFEVIET-EKTLYLVMEYASGGEVFDY
90 100 110 120 130 140
100 110 120 130 140 150
pF1KE0 VLNGGPLPESRAKALFRQMVEAIRYCHGCGVAHRDLKCENALLQG-FNLKLTDFGFAKVL
.. : . :..:.: :::.: :..::: ..::::: :: ::.: .:.:..::::.. .
CCDS73 LVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEF
150 160 170 180 190 200
160 170 180 190 200 210
pF1KE0 PKSHRELSQTFCGSTAYAAPEVLQGIPHDSKKGDVWSMGVVLYVMLCASLPFDDTDIPKM
... .::::: :::::..:: .:. . ::::.::.::... .::::: .. ..
CCDS73 TVGNK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL
210 220 230 240 250 260
220 230 240 250 260
pF1KE0 LWQQQKGVSFPTHLSISADCQDLLKRLLEPDMILRPSIEEVSWHPWLAST
. .: .. . .:.::..:::.:: . : : :.:.. :.
CCDS73 RERVLRG-KYRIPFYMSTDCENLLKKLLVLNPIKRGSLEQIMKDRWMNVGHEEEELKPYT
270 280 290 300 310 320
CCDS73 EPDPDFNDTKRIDIMVTMGFARDEINDALINQKYDEVMATYILLGRKPPEFEGGESLSSG
330 340 350 360 370 380
>>CCDS31029.2 MARK1 gene_id:4139|Hs108|chr1 (795 aa)
initn: 538 init1: 213 opt: 665 Z-score: 508.0 bits: 103.3 E(32554): 5.7e-22
Smith-Waterman score: 665; 41.2% identity (72.4% similar) in 257 aa overlap (10-265:60-311)
10 20 30
pF1KE0 MEDFLLSNGYQLGKTIGEGTYSKVKEAFSKKHQRKVAIK
:.: ::::.:...::: : :.::.:
CCDS31 QPTKSSSRQNIPRCRNSITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVK
30 40 50 60 70 80
40 50 60 70 80 90
pF1KE0 VIDKMGGPEEFIQRFLPRELQIVRTLDHKNIIQVYEMLESADGKICLVMELAEGGDVFDC
.::: .:... ::..:.. :.: ::....:..:. . . :::: : ::.:::
CCDS31 IIDKTQLNPTSLQKLF-REVRIMKILNHPNIVKLFEVIET-EKTLYLVMEYASGGEVFDY
90 100 110 120 130 140
100 110 120 130 140 150
pF1KE0 VLNGGPLPESRAKALFRQMVEAIRYCHGCGVAHRDLKCENALLQG-FNLKLTDFGFAKVL
.. : . :..:.: :::.: :..::: ..::::: :: ::.: .:.:..::::.. .
CCDS31 LVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEF
150 160 170 180 190 200
160 170 180 190 200 210
pF1KE0 PKSHRELSQTFCGSTAYAAPEVLQGIPHDSKKGDVWSMGVVLYVMLCASLPFDDTDIPKM
... .::::: :::::..:: .:. . ::::.::.::... .::::: .. ..
CCDS31 TVGNK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL
210 220 230 240 250 260
220 230 240 250 260
pF1KE0 LWQQQKGVSFPTHLSISADCQDLLKRLLEPDMILRPSIEEVSWHPWLAST
. .: .. . .:.::..:::.:: . : : :.:.. :.
CCDS31 RERVLRG-KYRIPFYMSTDCENLLKKLLVLNPIKRGSLEQIMKDRWMNVGHEEEELKPYT
270 280 290 300 310 320
CCDS31 EPDPDFNDTKRIDIMVTMGFARDEINDALINQKYDEVMATYILLGRKPPEFEGGESLSSG
330 340 350 360 370 380
>>CCDS73033.1 MARK1 gene_id:4139|Hs108|chr1 (796 aa)
initn: 538 init1: 213 opt: 665 Z-score: 508.0 bits: 103.3 E(32554): 5.7e-22
Smith-Waterman score: 665; 41.2% identity (72.4% similar) in 257 aa overlap (10-265:60-311)
10 20 30
pF1KE0 MEDFLLSNGYQLGKTIGEGTYSKVKEAFSKKHQRKVAIK
:.: ::::.:...::: : :.::.:
CCDS73 QPTKSSSRQNIPRCRNSITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVK
30 40 50 60 70 80
40 50 60 70 80 90
pF1KE0 VIDKMGGPEEFIQRFLPRELQIVRTLDHKNIIQVYEMLESADGKICLVMELAEGGDVFDC
.::: .:... ::..:.. :.: ::....:..:. . . :::: : ::.:::
CCDS73 IIDKTQLNPTSLQKLF-REVRIMKILNHPNIVKLFEVIET-EKTLYLVMEYASGGEVFDY
90 100 110 120 130 140
100 110 120 130 140 150
pF1KE0 VLNGGPLPESRAKALFRQMVEAIRYCHGCGVAHRDLKCENALLQG-FNLKLTDFGFAKVL
.. : . :..:.: :::.: :..::: ..::::: :: ::.: .:.:..::::.. .
CCDS73 LVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEF
150 160 170 180 190 200
160 170 180 190 200 210
pF1KE0 PKSHRELSQTFCGSTAYAAPEVLQGIPHDSKKGDVWSMGVVLYVMLCASLPFDDTDIPKM
... .::::: :::::..:: .:. . ::::.::.::... .::::: .. ..
CCDS73 TVGNK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL
210 220 230 240 250 260
220 230 240 250 260
pF1KE0 LWQQQKGVSFPTHLSISADCQDLLKRLLEPDMILRPSIEEVSWHPWLAST
. .: .. . .:.::..:::.:: . : : :.:.. :.
CCDS73 RERVLRG-KYRIPFYMSTDCENLLKKLLVLNPIKRGSLEQIMKDRWMNVGHEEEELKPYT
270 280 290 300 310 320
CCDS73 EPDPDFNDTKRIDIMVTMGFARDEINDALINQKYDEVMATYILLGRKPPEFEGGESLSSG
330 340 350 360 370 380
>>CCDS55947.1 MARK3 gene_id:4140|Hs108|chr14 (713 aa)
initn: 517 init1: 200 opt: 644 Z-score: 493.1 bits: 100.4 E(32554): 3.8e-21
Smith-Waterman score: 644; 40.1% identity (72.0% similar) in 257 aa overlap (10-265:56-307)
10 20 30
pF1KE0 MEDFLLSNGYQLGKTIGEGTYSKVKEAFSKKHQRKVAIK
:.: ::::.:...::: : :.::::
CCDS55 QEVTSRTSRSGARCRNSIASCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIK
30 40 50 60 70 80
40 50 60 70 80 90
pF1KE0 VIDKMGGPEEFIQRFLPRELQIVRTLDHKNIIQVYEMLESADGKICLVMELAEGGDVFDC
.::: .:... ::..:.. :.: ::....:..:. . . :.:: : ::.:::
CCDS55 IIDKTQLNPTSLQKLF-REVRIMKILNHPNIVKLFEVIET-EKTLYLIMEYASGGEVFDY
90 100 110 120 130 140
100 110 120 130 140 150
pF1KE0 VLNGGPLPESRAKALFRQMVEAIRYCHGCGVAHRDLKCENALLQG-FNLKLTDFGFAKVL
.. : . :..:.. :::.: :..::: ..::::: :: ::.. .:.:..::::.. .
CCDS55 LVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF
150 160 170 180 190 200
160 170 180 190 200 210
pF1KE0 PKSHRELSQTFCGSTAYAAPEVLQGIPHDSKKGDVWSMGVVLYVMLCASLPFDDTDIPKM
. . .::::: :::::..:: .:. . ::::.::.::... .::::: .. ..
CCDS55 TVGGK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL
210 220 230 240 250 260
220 230 240 250 260
pF1KE0 LWQQQKGVSFPTHLSISADCQDLLKRLLEPDMILRPSIEEVSWHPWLAST
. .: .. . .:.::..::::.: . : : ..:.. :.
CCDS55 RERVLRG-KYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFV
270 280 290 300 310 320
CCDS55 EPELDISDQKRIDIMVGMGYSQEEIQESLSKMKYDEITATYLLLGRKSSEVRPSSDLNNS
330 340 350 360 370 380
>>CCDS41993.1 MARK3 gene_id:4140|Hs108|chr14 (729 aa)
initn: 517 init1: 200 opt: 644 Z-score: 493.0 bits: 100.4 E(32554): 3.8e-21
Smith-Waterman score: 644; 40.1% identity (72.0% similar) in 257 aa overlap (10-265:56-307)
10 20 30
pF1KE0 MEDFLLSNGYQLGKTIGEGTYSKVKEAFSKKHQRKVAIK
:.: ::::.:...::: : :.::::
CCDS41 QEVTSRTSRSGARCRNSIASCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIK
30 40 50 60 70 80
40 50 60 70 80 90
pF1KE0 VIDKMGGPEEFIQRFLPRELQIVRTLDHKNIIQVYEMLESADGKICLVMELAEGGDVFDC
.::: .:... ::..:.. :.: ::....:..:. . . :.:: : ::.:::
CCDS41 IIDKTQLNPTSLQKLF-REVRIMKILNHPNIVKLFEVIET-EKTLYLIMEYASGGEVFDY
90 100 110 120 130 140
100 110 120 130 140 150
pF1KE0 VLNGGPLPESRAKALFRQMVEAIRYCHGCGVAHRDLKCENALLQG-FNLKLTDFGFAKVL
.. : . :..:.. :::.: :..::: ..::::: :: ::.. .:.:..::::.. .
CCDS41 LVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF
150 160 170 180 190 200
160 170 180 190 200 210
pF1KE0 PKSHRELSQTFCGSTAYAAPEVLQGIPHDSKKGDVWSMGVVLYVMLCASLPFDDTDIPKM
. . .::::: :::::..:: .:. . ::::.::.::... .::::: .. ..
CCDS41 TVGGK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL
210 220 230 240 250 260
220 230 240 250 260
pF1KE0 LWQQQKGVSFPTHLSISADCQDLLKRLLEPDMILRPSIEEVSWHPWLAST
. .: .. . .:.::..::::.: . : : ..:.. :.
CCDS41 RERVLRG-KYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFV
270 280 290 300 310 320
CCDS41 EPELDISDQKRIDIMVGMGYSQEEIQESLSKMKYDEITATYLLLGRKSSELDASDSSSSS
330 340 350 360 370 380
>>CCDS45166.1 MARK3 gene_id:4140|Hs108|chr14 (744 aa)
initn: 517 init1: 200 opt: 644 Z-score: 492.9 bits: 100.4 E(32554): 3.9e-21
Smith-Waterman score: 644; 40.1% identity (72.0% similar) in 257 aa overlap (10-265:56-307)
10 20 30
pF1KE0 MEDFLLSNGYQLGKTIGEGTYSKVKEAFSKKHQRKVAIK
:.: ::::.:...::: : :.::::
CCDS45 QEVTSRTSRSGARCRNSIASCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIK
30 40 50 60 70 80
40 50 60 70 80 90
pF1KE0 VIDKMGGPEEFIQRFLPRELQIVRTLDHKNIIQVYEMLESADGKICLVMELAEGGDVFDC
.::: .:... ::..:.. :.: ::....:..:. . . :.:: : ::.:::
CCDS45 IIDKTQLNPTSLQKLF-REVRIMKILNHPNIVKLFEVIET-EKTLYLIMEYASGGEVFDY
90 100 110 120 130 140
100 110 120 130 140 150
pF1KE0 VLNGGPLPESRAKALFRQMVEAIRYCHGCGVAHRDLKCENALLQG-FNLKLTDFGFAKVL
.. : . :..:.. :::.: :..::: ..::::: :: ::.. .:.:..::::.. .
CCDS45 LVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF
150 160 170 180 190 200
160 170 180 190 200 210
pF1KE0 PKSHRELSQTFCGSTAYAAPEVLQGIPHDSKKGDVWSMGVVLYVMLCASLPFDDTDIPKM
. . .::::: :::::..:: .:. . ::::.::.::... .::::: .. ..
CCDS45 TVGGK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL
210 220 230 240 250 260
220 230 240 250 260
pF1KE0 LWQQQKGVSFPTHLSISADCQDLLKRLLEPDMILRPSIEEVSWHPWLAST
. .: .. . .:.::..::::.: . : : ..:.. :.
CCDS45 RERVLRG-KYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFV
270 280 290 300 310 320
CCDS45 EPELDISDQKRIDIMVGMGYSQEEIQESLSKMKYDEITATYLLLGRKSSELDASDSSSSS
330 340 350 360 370 380
268 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 04:36:57 2016 done: Sat Nov 5 04:36:58 2016
Total Scan time: 2.180 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]