Result of FASTA (ccds) for
pF1KE0936
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0936, 418 aa
1>>>pF1KE0936 418 - 418 aa - 418 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.5887+/-0.00111; mu= -10.7243+/- 0.068
mean_var=538.3911+/-110.941, 0's: 0 Z-trim(117.9): 11 B-trim: 694 in 2/54
Lambda= 0.055275
statistics sampled from 18771 (18782) to 18771 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.821), E-opt: 0.2 (0.577), width: 16
Scan time: 3.760
The best scores are: opt bits E(32554)
CCDS9955.1 EVL gene_id:51466|Hs108|chr14 ( 418) 2789 236.2 4.3e-62
CCDS81851.1 EVL gene_id:51466|Hs108|chr14 ( 416) 2772 234.9 1.1e-61
CCDS33051.1 VASP gene_id:7408|Hs108|chr19 ( 380) 951 89.6 5.4e-18
CCDS31040.1 ENAH gene_id:55740|Hs108|chr1 ( 570) 694 69.3 1.1e-11
CCDS31041.1 ENAH gene_id:55740|Hs108|chr1 ( 591) 694 69.3 1.1e-11
>>CCDS9955.1 EVL gene_id:51466|Hs108|chr14 (418 aa)
initn: 2789 init1: 2789 opt: 2789 Z-score: 1228.2 bits: 236.2 E(32554): 4.3e-62
Smith-Waterman score: 2789; 100.0% identity (100.0% similar) in 418 aa overlap (1-418:1-418)
10 20 30 40 50 60
pF1KE0 MATSEQSICQARASVMVYDDTSKKWVPIKPGQQGFSRINIYHNTASNTFRVVGVKLQDQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 MATSEQSICQARASVMVYDDTSKKWVPIKPGQQGFSRINIYHNTASNTFRVVGVKLQDQQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 VVINYSIVKGLKYNQATPTFHQWRDARQVYGLNFASKEEATTFSNAMLFALNIMNSQEGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 VVINYSIVKGLKYNQATPTFHQWRDARQVYGLNFASKEEATTFSNAMLFALNIMNSQEGG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 PSSQRQVQNGPSPDEMDIQRRQVMEQHQQQRQESLERRTSATGPILPPGHPSSAASAPVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 PSSQRQVQNGPSPDEMDIQRRQVMEQHQQQRQESLERRTSATGPILPPGHPSSAASAPVS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 CSGPPPPPPPPVPPPPTGATPPPPPPLPAGGAQGSSHDESSMSGLAAAIAGAKLRRVQRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 CSGPPPPPPPPVPPPPTGATPPPPPPLPAGGAQGSSHDESSMSGLAAAIAGAKLRRVQRP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 EDASGGSSPSGTSKSDANRASSGGGGGGLMEEMNKLLAKRRKAASQSDKPAEKKEDESQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 EDASGGSSPSGTSKSDANRASSGGGGGGLMEEMNKLLAKRRKAASQSDKPAEKKEDESQM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 EDPSTSPSPGTRAASQPPNSSEAGRKPWERSNSVEKPVSSILSRTPSVAKSPEAKSPLQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 EDPSTSPSPGTRAASQPPNSSEAGRKPWERSNSVEKPVSSILSRTPSVAKSPEAKSPLQS
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 QPHSRMKPAGSVNDMALDAFDLDRMKQEILEEVVRELHKVKEEIIDAIRQELSGISTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 QPHSRMKPAGSVNDMALDAFDLDRMKQEILEEVVRELHKVKEEIIDAIRQELSGISTT
370 380 390 400 410
>>CCDS81851.1 EVL gene_id:51466|Hs108|chr14 (416 aa)
initn: 2772 init1: 2772 opt: 2772 Z-score: 1220.9 bits: 234.9 E(32554): 1.1e-61
Smith-Waterman score: 2772; 100.0% identity (100.0% similar) in 415 aa overlap (4-418:2-416)
10 20 30 40 50 60
pF1KE0 MATSEQSICQARASVMVYDDTSKKWVPIKPGQQGFSRINIYHNTASNTFRVVGVKLQDQQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MSEQSICQARASVMVYDDTSKKWVPIKPGQQGFSRINIYHNTASNTFRVVGVKLQDQQ
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 VVINYSIVKGLKYNQATPTFHQWRDARQVYGLNFASKEEATTFSNAMLFALNIMNSQEGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 VVINYSIVKGLKYNQATPTFHQWRDARQVYGLNFASKEEATTFSNAMLFALNIMNSQEGG
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 PSSQRQVQNGPSPDEMDIQRRQVMEQHQQQRQESLERRTSATGPILPPGHPSSAASAPVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 PSSQRQVQNGPSPDEMDIQRRQVMEQHQQQRQESLERRTSATGPILPPGHPSSAASAPVS
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE0 CSGPPPPPPPPVPPPPTGATPPPPPPLPAGGAQGSSHDESSMSGLAAAIAGAKLRRVQRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 CSGPPPPPPPPVPPPPTGATPPPPPPLPAGGAQGSSHDESSMSGLAAAIAGAKLRRVQRP
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE0 EDASGGSSPSGTSKSDANRASSGGGGGGLMEEMNKLLAKRRKAASQSDKPAEKKEDESQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 EDASGGSSPSGTSKSDANRASSGGGGGGLMEEMNKLLAKRRKAASQSDKPAEKKEDESQM
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE0 EDPSTSPSPGTRAASQPPNSSEAGRKPWERSNSVEKPVSSILSRTPSVAKSPEAKSPLQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 EDPSTSPSPGTRAASQPPNSSEAGRKPWERSNSVEKPVSSILSRTPSVAKSPEAKSPLQS
300 310 320 330 340 350
370 380 390 400 410
pF1KE0 QPHSRMKPAGSVNDMALDAFDLDRMKQEILEEVVRELHKVKEEIIDAIRQELSGISTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 QPHSRMKPAGSVNDMALDAFDLDRMKQEILEEVVRELHKVKEEIIDAIRQELSGISTT
360 370 380 390 400 410
>>CCDS33051.1 VASP gene_id:7408|Hs108|chr19 (380 aa)
initn: 338 init1: 338 opt: 951 Z-score: 436.5 bits: 89.6 E(32554): 5.4e-18
Smith-Waterman score: 1093; 48.0% identity (67.4% similar) in 427 aa overlap (4-412:2-374)
10 20 30 40 50
pF1KE0 MATSEQSICQARASVMVYDDTSKKWVPIKPGQQGFSRINIYHNTASNTFRVVGVKLQ-DQ
:: ::..::.::.::: .:.:.: : :.:::..:::: ..:.::::: :.: ::
CCDS33 MSETVICSSRATVMLYDDGNKRWLPAGTGPQAFSRVQIYHNPTANSFRVVGRKMQPDQ
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 QVVINYSIVKGLKYNQATPTFHQWRDARQVYGLNFASKEEATTFSNAMLFALNIMNSQEG
::::: .::.:.:::::::.::::::::::.::::.:::.:. :. .: ::. ... :
CCDS33 QVVINCAIVRGVKYNQATPNFHQWRDARQVWGLNFGSKEDAAQFAAGMASALEALEG--G
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 GPSSQR-----QVQNGPSPDEMDIQRRQVMEQHQQQRQESLERRTSATGPILPPGHPSSA
:: .: :::::.:.. :.:: : .: .:::.: .: ::. :...
CCDS33 GPPPPPALPTWSVPNGPSPEEVEQQKRQ-----QPGPSEHIERRVSNAGG--PPAPPAGG
120 130 140 150 160
180 190 200 210 220
pF1KE0 ASAPVSCSGPPPPPPPPVPP--PPTGAT---------PPPPPPLPAGGAQGSSHDESSMS
: :::::: :: :: ::.:. ::: ::::: ::: . ..
CCDS33 PPPP---PGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAPPLPA--AQGPGGGGAGAP
170 180 190 200 210 220
230 240 250 260 270 280
pF1KE0 GLAAAIAGAKLRRVQRPEDASGGSSPSGTSKSDANRASSG-GGGGGLMEEMNKLLAKRRK
::::::::::::.:.. :.:::: :. : .: :: .:::::::::: .::.:::
CCDS33 GLAAAIAGAKLRKVSKQEEASGG--PT------APKAESGRSGGGGLMEEMNAMLARRRK
230 240 250 260 270
290 300 310 320 330 340
pF1KE0 AASQSDKPAEKKEDESQMEDPSTSPSPGTRAASQPPNSSEAGRKPWERSNSVEKPVSSIL
: .: . . : :. .: : : .:. : .::. :.:::. ::. : .
CCDS33 A-TQVGEKTPKDESANQEE-------PEARV----PAQSESVRRPWEK-NSTTLPR---M
280 290 300 310 320
350 360 370 380 390 400
pF1KE0 SRTPSVAKSPEAKSPLQSQPHSRMKPAGSVNDMALDAFDLDRMKQEILEEVVRELHKVKE
. . ::. : ..:: . :..: : ::.:.:::.:::: .::.::::
CCDS33 KSSSSVTTS-------ETQPCT---PSSS------DYSDLQRVKQELLEEVKKELQKVKE
330 340 350 360
410
pF1KE0 EIIDAIRQELSGISTT
:::.:. :::
CCDS33 EIIEAFVQELRKRGSP
370 380
>>CCDS31040.1 ENAH gene_id:55740|Hs108|chr1 (570 aa)
initn: 1274 init1: 472 opt: 694 Z-score: 323.6 bits: 69.3 E(32554): 1.1e-11
Smith-Waterman score: 754; 39.2% identity (52.5% similar) in 451 aa overlap (4-272:2-447)
10 20 30 40 50 60
pF1KE0 MATSEQSICQARASVMVYDDTSKKWVPIKPGQQGFSRINIYHNTASNTFRVVGVKLQDQQ
::::::::::.::::::..::::: :. ::::..:::.:..::::::: :.::.:
CCDS31 MSEQSICQARAAVMVYDDANKKWVPAG-GSTGFSRVHIYHHTGNNTFRVVGRKIQDHQ
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 VVINYSIVKGLKYNQATPTFHQWRDARQVYGLNFASKEEATTFSNAMLFALNIMNSQEGG
:::: .: ::::::::: ::::::::::::::::.:::.:..:..::. ::...:::: :
CCDS31 VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALEVLNSQETG
60 70 80 90 100 110
130 140 150
pF1KE0 PSSQRQ-------VQNGPSPDEMDIQRRQVMEQHQQQ-----------------------
:. :: :::::: .:..:::::..::..:.
CCDS31 PTLPRQNSQLPAQVQNGPSQEELEIQRRQLQEQQRQKELERERLERERMERERLERERLE
120 130 140 150 160 170
pF1KE0 ----------------------RQESLERR------------------------------
::: :::.
CCDS31 RERLERERLEQEQLERERQERERQERLERQERLERQERLERQERLDRERQERQERERLER
180 190 200 210 220 230
160
pF1KE0 ----------------------------------------------TSAT----------
.::.
CCDS31 LERERQERERQEQLEREQLEWERERRISSAAAPASVETPLNSVLGDSSASEPGLQAASQP
240 250 260 270 280 290
170 180 190
pF1KE0 -----------GPI-------LPPGHPSSAASA-----------PVSCSGPPPPPPPP--
::. :::: :..:. : :. .:::::::::
CCDS31 AETPSQQGIVLGPLAPPPPPPLPPG-PAQASVALPPPPGPPPPPPLPSTGPPPPPPPPPL
300 310 320 330 340 350
200 210 220 230 240
pF1KE0 ---VPPPPTGATPPPPPPLPAGG--AQGSSHDESSMSGLAAAIAGAKLRRVQRPEDAS--
::::: ::: :::::.: . :.:. ..::::::::::::.:.: ::.:
CCDS31 PNQVPPPP---PPPPAPPLPASGFFLASMSEDNRPLTGLAAAIAGAKLRKVSRMEDTSFP
360 370 380 390 400 410
250 260 270 280 290
pF1KE0 -GGSS---PSGTSKSDANRASSGG--GGGGLMEEMNKLLAKRRKAASQSDKPAEKKEDES
::.. :..::.:..:... ::.:::::
CCDS31 SGGNAIGVNSASSKTDTGRGNGPLPLGGSGLMEEMSALLARRRRIAEKGSTIETEQKEDK
420 430 440 450 460 470
300 310 320 330 340 350
pF1KE0 QMEDPSTSPSPGTRAASQPPNSSEAGRKPWERSNSVEKPVSSILSRTPSVAKSPEAKSPL
CCDS31 GEDSEPVTSKASSTSTPEPTRKPWERTNTMNGSKSPVISRPKSTPLSQPSANGVQTEGLD
480 490 500 510 520 530
>>CCDS31041.1 ENAH gene_id:55740|Hs108|chr1 (591 aa)
initn: 1274 init1: 472 opt: 694 Z-score: 323.4 bits: 69.3 E(32554): 1.1e-11
Smith-Waterman score: 754; 39.2% identity (52.5% similar) in 451 aa overlap (4-272:2-447)
10 20 30 40 50 60
pF1KE0 MATSEQSICQARASVMVYDDTSKKWVPIKPGQQGFSRINIYHNTASNTFRVVGVKLQDQQ
::::::::::.::::::..::::: :. ::::..:::.:..::::::: :.::.:
CCDS31 MSEQSICQARAAVMVYDDANKKWVPAG-GSTGFSRVHIYHHTGNNTFRVVGRKIQDHQ
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 VVINYSIVKGLKYNQATPTFHQWRDARQVYGLNFASKEEATTFSNAMLFALNIMNSQEGG
:::: .: ::::::::: ::::::::::::::::.:::.:..:..::. ::...:::: :
CCDS31 VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALEVLNSQETG
60 70 80 90 100 110
130 140 150
pF1KE0 PSSQRQ-------VQNGPSPDEMDIQRRQVMEQHQQQ-----------------------
:. :: :::::: .:..:::::..::..:.
CCDS31 PTLPRQNSQLPAQVQNGPSQEELEIQRRQLQEQQRQKELERERLERERMERERLERERLE
120 130 140 150 160 170
pF1KE0 ----------------------RQESLERR------------------------------
::: :::.
CCDS31 RERLERERLEQEQLERERQERERQERLERQERLERQERLERQERLDRERQERQERERLER
180 190 200 210 220 230
160
pF1KE0 ----------------------------------------------TSAT----------
.::.
CCDS31 LERERQERERQEQLEREQLEWERERRISSAAAPASVETPLNSVLGDSSASEPGLQAASQP
240 250 260 270 280 290
170 180 190
pF1KE0 -----------GPI-------LPPGHPSSAASA-----------PVSCSGPPPPPPPP--
::. :::: :..:. : :. .:::::::::
CCDS31 AETPSQQGIVLGPLAPPPPPPLPPG-PAQASVALPPPPGPPPPPPLPSTGPPPPPPPPPL
300 310 320 330 340 350
200 210 220 230 240
pF1KE0 ---VPPPPTGATPPPPPPLPAGG--AQGSSHDESSMSGLAAAIAGAKLRRVQRPEDAS--
::::: ::: :::::.: . :.:. ..::::::::::::.:.: ::.:
CCDS31 PNQVPPPP---PPPPAPPLPASGFFLASMSEDNRPLTGLAAAIAGAKLRKVSRMEDTSFP
360 370 380 390 400 410
250 260 270 280 290
pF1KE0 -GGSS---PSGTSKSDANRASSGG--GGGGLMEEMNKLLAKRRKAASQSDKPAEKKEDES
::.. :..::.:..:... ::.:::::
CCDS31 SGGNAIGVNSASSKTDTGRGNGPLPLGGSGLMEEMSALLARRRRIAEKGSTIETEQKEDK
420 430 440 450 460 470
300 310 320 330 340 350
pF1KE0 QMEDPSTSPSPGTRAASQPPNSSEAGRKPWERSNSVEKPVSSILSRTPSVAKSPEAKSPL
CCDS31 GEDSEPVTSKASSTSTPEPTRKPWERTNTMNGSKSPVISRRDSPRKNQIVFDNRSYDSLH
480 490 500 510 520 530
418 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 04:35:42 2016 done: Sat Nov 5 04:35:43 2016
Total Scan time: 3.760 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]