Result of FASTA (omim) for
pF1KE0932
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0932, 411 aa
1>>>pF1KE0932 411 - 411 aa - 411 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9982+/-0.000424; mu= 12.0655+/- 0.026
mean_var=176.5542+/-37.506, 0's: 0 Z-trim(117.0): 24 B-trim: 875 in 2/54
Lambda= 0.096524
statistics sampled from 28609 (28633) to 28609 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.697), E-opt: 0.2 (0.336), width: 16
Scan time: 8.890
The best scores are: opt bits E(85289)
NP_068780 (OMIM: 108985,189967) transcriptional en ( 426) 2784 399.9 6.1e-111
NP_003204 (OMIM: 601714) transcriptional enhancer ( 434) 2137 309.8 8.1e-84
XP_006723491 (OMIM: 601729) PREDICTED: transcripti ( 434) 1608 236.2 1.2e-61
NP_958851 (OMIM: 601714) transcriptional enhancer ( 305) 1529 225.0 2e-58
NP_003205 (OMIM: 603170) transcriptional enhancer ( 435) 1513 222.9 1.2e-57
NP_958849 (OMIM: 601714) transcriptional enhancer ( 391) 1434 211.9 2.2e-54
XP_011525706 (OMIM: 601729) PREDICTED: transcripti ( 441) 1119 168.1 3.9e-41
XP_011525708 (OMIM: 601729) PREDICTED: transcripti ( 228) 687 107.6 3.2e-23
XP_011525707 (OMIM: 601729) PREDICTED: transcripti ( 231) 681 106.8 5.8e-23
XP_006723492 (OMIM: 601729) PREDICTED: transcripti ( 261) 676 106.2 1e-22
NP_001243591 (OMIM: 601729) transcriptional enhanc ( 319) 676 106.2 1.2e-22
XP_005259391 (OMIM: 601729) PREDICTED: transcripti ( 411) 676 106.4 1.4e-22
NP_003589 (OMIM: 601729) transcriptional enhancer ( 447) 676 106.4 1.5e-22
XP_011525705 (OMIM: 601729) PREDICTED: transcripti ( 450) 676 106.4 1.5e-22
NP_001243587 (OMIM: 601729) transcriptional enhanc ( 450) 676 106.4 1.5e-22
NP_001243588 (OMIM: 601729) transcriptional enhanc ( 450) 676 106.4 1.5e-22
NP_001243590 (OMIM: 601729) transcriptional enhanc ( 451) 676 106.4 1.5e-22
NP_001243589 (OMIM: 601729) transcriptional enhanc ( 451) 676 106.4 1.5e-22
XP_006723487 (OMIM: 601729) PREDICTED: transcripti ( 451) 676 106.4 1.5e-22
XP_011525703 (OMIM: 601729) PREDICTED: transcripti ( 454) 676 106.4 1.5e-22
XP_011525701 (OMIM: 601729) PREDICTED: transcripti ( 454) 676 106.4 1.5e-22
XP_011525704 (OMIM: 601729) PREDICTED: transcripti ( 454) 676 106.4 1.5e-22
XP_011525700 (OMIM: 601729) PREDICTED: transcripti ( 454) 676 106.4 1.5e-22
XP_011525702 (OMIM: 601729) PREDICTED: transcripti ( 454) 676 106.4 1.5e-22
>>NP_068780 (OMIM: 108985,189967) transcriptional enhanc (426 aa)
initn: 2784 init1: 2784 opt: 2784 Z-score: 2112.8 bits: 399.9 E(85289): 6.1e-111
Smith-Waterman score: 2784; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:16-426)
10 20 30 40
pF1KE0 MERMSDSADKPIDNDAEGVWSPDIEQSFQEALAIYPPCGRRKIIL
:::::::::::::::::::::::::::::::::::::::::::::
NP_068 MEPSSWSGSESPAENMERMSDSADKPIDNDAEGVWSPDIEQSFQEALAIYPPCGRRKIIL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE0 SDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKSRDFHSKLKDQTAKDKALQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 SDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKSRDFHSKLKDQTAKDKALQ
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE0 HMAAMSSAQIVSATAIHNKLGLPGIPRPTFPGAPGFWPGMIQTGQPGSSQDVKPFVQQAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 HMAAMSSAQIVSATAIHNKLGLPGIPRPTFPGAPGFWPGMIQTGQPGSSQDVKPFVQQAY
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE0 PIQPAVTAPIPGFEPASAPAPSVPAWQGRSIGTTKLRLVEFSAFLEQQRDPDSYNKHLFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 PIQPAVTAPIPGFEPASAPAPSVPAWQGRSIGTTKLRLVEFSAFLEQQRDPDSYNKHLFV
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE0 HIGHANHSYSDPLLESVDIRQIYDKFPEKKGGLKELFGKGPQNAFFLVKFWADLNCNIQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 HIGHANHSYSDPLLESVDIRQIYDKFPEKKGGLKELFGKGPQNAFFLVKFWADLNCNIQD
250 260 270 280 290 300
290 300 310 320 330 340
pF1KE0 DAGAFYGVTSQYESSENMTVTCSTKVCSFGKQVVEKVETEYARFENGRFVYRINRSPMCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 DAGAFYGVTSQYESSENMTVTCSTKVCSFGKQVVEKVETEYARFENGRFVYRINRSPMCE
310 320 330 340 350 360
350 360 370 380 390 400
pF1KE0 YMINFIHKLKHLPEKYMMNSVLENFTILLVVTNRDTQETLLCMACVFEVSNSEHGAQHHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 YMINFIHKLKHLPEKYMMNSVLENFTILLVVTNRDTQETLLCMACVFEVSNSEHGAQHHI
370 380 390 400 410 420
410
pF1KE0 YRLVKD
::::::
NP_068 YRLVKD
>>NP_003204 (OMIM: 601714) transcriptional enhancer fact (434 aa)
initn: 2102 init1: 1953 opt: 2137 Z-score: 1625.7 bits: 309.8 E(85289): 8.1e-84
Smith-Waterman score: 2137; 77.2% identity (90.5% similar) in 412 aa overlap (5-411:28-434)
10 20 30
pF1KE0 MERMSDSADKPIDNDAEGVWSPDIEQSFQEALAIYPP
:.. :::::::::::::::::::::::::::::
NP_003 MEGTAGTITSNEWSSPTSPEGSTASGGSQALDKPIDNDAEGVWSPDIEQSFQEALAIYPP
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE0 CGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKSRDFHSKLKDQ
:::::::::::::::::::::::::::::::::::::::::::::::::.:....:::::
NP_003 CGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKAREIQAKLKDQ
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE0 TAKDKALQHMAAMSSAQIVSATAIHNKLGLPGIPRPTFPGAPGFWPGMIQTGQPGSSQDV
.::::::: :::::::::.::::.:....: : :.. ::: : . :: :.:.::
NP_003 AAKDKALQSMAAMSSAQIISATAFHSSMALA--RGPGRPAVSGFWQGALP-GQAGTSHDV
130 140 150 160 170
160 170 180 190 200 210
pF1KE0 KPFVQQAYPIQPAVTAPIPGFEPASAPAPS-----VPAWQGRSIGTTKLRLVEFSAFLEQ
::: ::.: .:: . :.:::: ..:::: .: :::::....:: ..::::::::
NP_003 KPFSQQTYAVQPPL--PLPGFESPAGPAPSPSAPPAPPWQGRSVASSKLWMLEFSAFLEQ
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE0 QRDPDSYNKHLFVHIGHANHSYSDPLLESVDIRQIYDKFPEKKGGLKELFGKGPQNAFFL
:.:::.::::::::::... ::::: ::.::::::::::::::::::.:: .::.:::::
NP_003 QQDPDTYNKHLFVHIGQSSPSYSDPYLEAVDIRQIYDKFPEKKGGLKDLFERGPSNAFFL
240 250 260 270 280 290
280 290 300 310 320 330
pF1KE0 VKFWADLNCNIQDDAGAFYGVTSQYESSENMTVTCSTKVCSFGKQVVEKVETEYARFENG
:::::::: ::.:....::::.::::: ::: .:::::::::::::::::::::::.:::
NP_003 VKFWADLNTNIEDEGSSFYGVSSQYESPENMIITCSTKVCSFGKQVVEKVETEYARYENG
300 310 320 330 340 350
340 350 360 370 380 390
pF1KE0 RFVYRINRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILLVVTNRDTQETLLCMACVF
.. :::.:::.:::::::::::::::::::::::::::::: :::::::::::::.: ::
NP_003 HYSYRIHRSPLCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETLLCIAYVF
360 370 380 390 400 410
400 410
pF1KE0 EVSNSEHGAQHHIYRLVKD
::: ::::::::::::::.
NP_003 EVSASEHGAQHHIYRLVKE
420 430
>>XP_006723491 (OMIM: 601729) PREDICTED: transcriptional (434 aa)
initn: 1675 init1: 640 opt: 1608 Z-score: 1227.6 bits: 236.2 E(85289): 1.2e-61
Smith-Waterman score: 1677; 64.3% identity (78.5% similar) in 428 aa overlap (5-411:30-434)
10 20 30
pF1KE0 MERMSDSADKPIDNDAEGVWSPDIEQSFQEALAIY
:..: :::::::::::::::::::::
XP_006 MGEPRAGAALDDGSGWTGSEEGSEEGTGGSEGAGGDGGPDAEGVWSPDIEQSFQEALAIY
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE0 PPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKSRDFHSKLK
:::::::::::::::::::::::::::::::::::::::::::::::::::::...::::
XP_006 PPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKSREIQSKLK
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE0 DQTAKDKALQHMAAMSSAQIVSATAIHNKLGLPGIPRPTFPGAP---GFWPGMIQTGQPG
::..::::.: ::.:::::..:: ... ::: :: : : :: : .: :
XP_006 DQVSKDKAFQTMATMSSAQLISAPSLQAKLG------PTGPQASELFQFWSG--GSGPPW
130 140 150 160 170
160 170 180 190 200
pF1KE0 SSQDVKPFVQQAYPIQPAVTAP---IPGFEPASA------PAPSVPAWQGRSIGTTKLRL
. ::::: : :. ..: : .::.:: .: :.:: ::::.:..::..:.:
XP_006 NVPDVKPFSQT--PFTLSLTPPSTDLPGYEPPQALSPLPPPTPSPPAWQARGLGTARLQL
180 190 200 210 220 230
210 220 230 240 250 260
pF1KE0 VEFSAFLEQQRDPDSYNKHLFVHIGHANHSYSDPLLESVDIRQIYDKFPEKKGGLKELFG
::::::.: :::..::::::.. : . : :::::.::::::::::::::.::.
XP_006 VEFSAFVEPPDAVDSYQRHLFVHISQHCPSPGAPPLESVDVRQIYDKFPEKKGGLRELYD
240 250 260 270 280 290
270 280 290 300 310
pF1KE0 KGPQNAFFLVKFWADLNCNIQ-DDAGA--------FYGVTSQYESSENMTVTCSTKVCSF
.:: .:::::::::::: . . ..::: ::::.::::: :.::.:::.:
XP_006 RGPPHAFFLVKFWADLNWGPSGEEAGAGGSISSGGFYGVSSQYESLEHMTLTCSSK----
300 310 320 330 340
320 330 340 350 360 370
pF1KE0 GKQVVEKVETEYARFENGRFVYRINRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILL
:: :..:.::::::. :::::::..::.:::..:::.:::::::::::::
XP_006 ---------TERAQLEDGRFVYRLLRSPMCEYLVNFLHKLRQLPERYMMNSVLENFTILQ
350 360 370 380 390
380 390 400 410
pF1KE0 VVTNRDTQETLLCMACVFEVSNSEHGAQHHIYRLVKD
::::::::: ::: : :::::.::.::::::::::.:
XP_006 VVTNRDTQELLLCTAYVFEVSTSERGAQHHIYRLVRD
400 410 420 430
>>NP_958851 (OMIM: 601714) transcriptional enhancer fact (305 aa)
initn: 1498 init1: 1349 opt: 1529 Z-score: 1170.0 bits: 225.0 E(85289): 2e-58
Smith-Waterman score: 1529; 73.0% identity (88.1% similar) in 311 aa overlap (107-411:1-305)
80 90 100 110 120 130
pF1KE0 SHIQVLARRKSRDFHSKLKDQTAKDKALQHMAAMSSAQIVSATAIHNKLGLP-GIPRPTF
:::::::::.::::.:....: : :
NP_958 MAAMSSAQIISATAFHSSMALARG---PGR
10 20
140 150 160 170 180 190
pF1KE0 PGAPGFWPGMIQTGQPGSSQDVKPFVQQAYPIQPAVTAPIPGFEPASAPAPS-----VPA
:.. ::: : . :: :.:.::::: ::.: .:: . :.:::: ..:::: .:
NP_958 PAVSGFWQGALP-GQAGTSHDVKPFSQQTYAVQPPL--PLPGFESPAGPAPSPSAPPAPP
30 40 50 60 70 80
200 210 220 230 240 250
pF1KE0 WQGRSIGTTKLRLVEFSAFLEQQRDPDSYNKHLFVHIGHANHSYSDPLLESVDIRQIYDK
:::::....:: ..:::::::::.:::.::::::::::... ::::: ::.:::::::::
NP_958 WQGRSVASSKLWMLEFSAFLEQQQDPDTYNKHLFVHIGQSSPSYSDPYLEAVDIRQIYDK
90 100 110 120 130 140
260 270 280 290 300 310
pF1KE0 FPEKKGGLKELFGKGPQNAFFLVKFWADLNCNIQDDAGAFYGVTSQYESSENMTVTCSTK
:::::::::.:: .::.::::::::::::: ::.:....::::.::::: ::: .:::::
NP_958 FPEKKGGLKDLFERGPSNAFFLVKFWADLNTNIEDEGSSFYGVSSQYESPENMIITCSTK
150 160 170 180 190 200
320 330 340 350 360 370
pF1KE0 VCSFGKQVVEKVETEYARFENGRFVYRINRSPMCEYMINFIHKLKHLPEKYMMNSVLENF
::::::::::::::::::.:::.. :::.:::.:::::::::::::::::::::::::::
NP_958 VCSFGKQVVEKVETEYARYENGHYSYRIHRSPLCEYMINFIHKLKHLPEKYMMNSVLENF
210 220 230 240 250 260
380 390 400 410
pF1KE0 TILLVVTNRDTQETLLCMACVFEVSNSEHGAQHHIYRLVKD
::: :::::::::::::.: ::::: ::::::::::::::.
NP_958 TILQVVTNRDTQETLLCIAYVFEVSASEHGAQHHIYRLVKE
270 280 290 300
>>NP_003205 (OMIM: 603170) transcriptional enhancer fact (435 aa)
initn: 1869 init1: 1242 opt: 1513 Z-score: 1156.1 bits: 222.9 E(85289): 1.2e-57
Smith-Waterman score: 2011; 73.1% identity (87.9% similar) in 413 aa overlap (9-411:24-435)
10 20 30 40
pF1KE0 MERMSDSADKPIDNDAEGVWSPDIEQSFQEALAIYPPCGRRKIIL
:: .:::::::::::::::::::::::::::::::::
NP_003 MASNSWNASSSPGEAREDGPEGLDKGLDNDAEGVWSPDIEQSFQEALAIYPPCGRRKIIL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE0 SDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKSRDFHSKLK----DQTAKD
:::::::::::::::::::::::::::::::::::::::.: :... .: ::..::
NP_003 SDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARKKVREYQVGIKAMNLDQVSKD
70 80 90 100 110 120
110 120 130 140 150
pF1KE0 KALQHMAAMSSAQIVSATAIHNKLGLPG-IPRPTFPGAPGFWPGMIQTGQ-PGSSQDVKP
:::: ::.:::::::::....::.. :. .:. .: . :: . :: :: :::.::
NP_003 KALQSMASMSSAQIVSASVLQNKFSPPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKP
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE0 FVQQAYPIQPAVTAPIPGFEPASAPAPS----VPAWQGRSIGTTKLRLVEFSAFLEQQRD
:.: :::::: . . ..:: :: :: ::.:: :.:....:::.:.:::.: :::
NP_003 FAQPAYPIQPPLPPTLSSYEPL-APLPSAAASVPVWQDRTIASSRLRLLEYSAFMEVQRD
190 200 210 220 230
220 230 240 250 260 270
pF1KE0 PDSYNKHLFVHIGHANHSYSDPLLESVDIRQIYDKFPEKKGGLKELFGKGPQNAFFLVKF
::.:.::::::::..: ..::: ::.::.:::::::::::::::::. ::: ::::::::
NP_003 PDTYSKHLFVHIGQTNPAFSDPPLEAVDVRQIYDKFPEKKGGLKELYEKGPPNAFFLVKF
240 250 260 270 280 290
280 290 300 310 320 330
pF1KE0 WADLNCNIQDDAGAFYGVTSQYESSENMTVTCSTKVCSFGKQVVEKVETEYARFENGRFV
::::: .::. ::::::.::: :...::.. :::::::::::::::::::::.::::::
NP_003 WADLNSTIQEGPGAFYGVSSQYSSADSMTISVSTKVCSFGKQVVEKVETEYARLENGRFV
300 310 320 330 340 350
340 350 360 370 380 390
pF1KE0 YRINRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILLVVTNRDTQETLLCMACVFEVS
:::.:::::::::::::::::::::::::::::::::: :::.::.::::: .: :::::
NP_003 YRIHRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTSRDSQETLLVIAFVFEVS
360 370 380 390 400 410
400 410
pF1KE0 NSEHGAQHHIYRLVKD
.::::::::.:.::::
NP_003 TSEHGAQHHVYKLVKD
420 430
>>NP_958849 (OMIM: 601714) transcriptional enhancer fact (391 aa)
initn: 1946 init1: 1284 opt: 1434 Z-score: 1097.2 bits: 211.9 E(85289): 2.2e-54
Smith-Waterman score: 1886; 70.6% identity (81.8% similar) in 412 aa overlap (5-411:28-391)
10 20 30
pF1KE0 MERMSDSADKPIDNDAEGVWSPDIEQSFQEALAIYPP
:.. :::::::::::::::::::::::::::::
NP_958 MEGTAGTITSNEWSSPTSPEGSTASGGSQALDKPIDNDAEGVWSPDIEQSFQEALAIYPP
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE0 CGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKSRDFHSKLKDQ
:::::::::::::::::::::::::::::::::::::::::::::::::.:....:::
NP_958 CGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKAREIQAKLK--
70 80 90 100 110
100 110 120 130 140 150
pF1KE0 TAKDKALQHMAAMSSAQIVSATAIHNKLGLPGIPRPTFPGAPGFWPGMIQTGQPGSSQDV
:: : . :: :.:.::
NP_958 -------------------------------------------FWQGALP-GQAGTSHDV
120 130
160 170 180 190 200 210
pF1KE0 KPFVQQAYPIQPAVTAPIPGFEPASAPAPS-----VPAWQGRSIGTTKLRLVEFSAFLEQ
::: ::.: .:: . :.:::: ..:::: .: :::::....:: ..::::::::
NP_958 KPFSQQTYAVQPPL--PLPGFESPAGPAPSPSAPPAPPWQGRSVASSKLWMLEFSAFLEQ
140 150 160 170 180 190
220 230 240 250 260 270
pF1KE0 QRDPDSYNKHLFVHIGHANHSYSDPLLESVDIRQIYDKFPEKKGGLKELFGKGPQNAFFL
:.:::.::::::::::... ::::: ::.::::::::::::::::::.:: .::.:::::
NP_958 QQDPDTYNKHLFVHIGQSSPSYSDPYLEAVDIRQIYDKFPEKKGGLKDLFERGPSNAFFL
200 210 220 230 240 250
280 290 300 310 320 330
pF1KE0 VKFWADLNCNIQDDAGAFYGVTSQYESSENMTVTCSTKVCSFGKQVVEKVETEYARFENG
:::::::: ::.:....::::.::::: ::: .:::::::::::::::::::::::.:::
NP_958 VKFWADLNTNIEDEGSSFYGVSSQYESPENMIITCSTKVCSFGKQVVEKVETEYARYENG
260 270 280 290 300 310
340 350 360 370 380 390
pF1KE0 RFVYRINRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILLVVTNRDTQETLLCMACVF
.. :::.:::.:::::::::::::::::::::::::::::: :::::::::::::.: ::
NP_958 HYSYRIHRSPLCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETLLCIAYVF
320 330 340 350 360 370
400 410
pF1KE0 EVSNSEHGAQHHIYRLVKD
::: ::::::::::::::.
NP_958 EVSASEHGAQHHIYRLVKE
380 390
>>XP_011525706 (OMIM: 601729) PREDICTED: transcriptional (441 aa)
initn: 1661 init1: 512 opt: 1119 Z-score: 859.5 bits: 168.1 E(85289): 3.9e-41
Smith-Waterman score: 1653; 63.4% identity (77.6% similar) in 429 aa overlap (5-411:30-441)
10 20 30
pF1KE0 MERMSDSADKPIDNDAEGVWSPDIEQSFQEALAIY
:..: :::::::::::::::::::::
XP_011 MGEPRAGAALDDGSGWTGSEEGSEEGTGGSEGAGGDGGPDAEGVWSPDIEQSFQEALAIY
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE0 PPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKSRDFHSKLK
:::::::::::::::::::::::::::::::::::::::::::::::::::::...::::
XP_011 PPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKSREIQSKLK
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE0 ----DQTAKDKALQHMAAMSSAQIVSATAIHNKLGLPGIPRPTFPGAPGFWPGMIQTGQP
::..::::.: ::.:::::..:: ... ::: : :: : .: :
XP_011 ALNVDQVSKDKAFQTMATMSSAQLISAPSLQAKLGPTGPQVVQASELFQFWSG--GSGPP
130 140 150 160 170
160 170 180 190 200
pF1KE0 GSSQDVKPFVQQAYPIQPAVTAP---IPGFEPASA------PAPSVPAWQGRSIGTTKLR
. ::::: : :. ..: : .::.:: .: :.:: ::::.:..::..:.
XP_011 WNVPDVKPFSQT--PFTLSLTPPSTDLPGYEPPQALSPLPPPTPSPPAWQARGLGTARLQ
180 190 200 210 220 230
210 220 230 240 250 260
pF1KE0 LVEFSAFLEQQRDPDSYNKHLFVHIGHANHSYSDPLLESVDIRQIYDKFPEKKGGLKELF
:::::::.: :::..::::::.. : . : :::::.::::::::::::::.::.
XP_011 LVEFSAFVEPPDAVDSYQRHLFVHISQHCPSPGAPPLESVDVRQIYDKFPEKKGGLRELY
240 250 260 270 280 290
270 280 290 300 310
pF1KE0 GKGPQNAFFLVKFWADLNCNIQ-DDAGA--------FYGVTSQYESSENMTVTCSTKVCS
.:: .:::::::::::: . . ..::: ::::.::::: :.::.:::.:
XP_011 DRGPPHAFFLVKFWADLNWGPSGEEAGAGGSISSGGFYGVSSQYESLEHMTLTCSSK---
300 310 320 330 340 350
320 330 340 350 360 370
pF1KE0 FGKQVVEKVETEYARFENGRFVYRINRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTIL
:: :..:.::::::. :::::::..::.:::..:::.:::::::::::::
XP_011 ----------TERAQLEDGRFVYRLLRSPMCEYLVNFLHKLRQLPERYMMNSVLENFTIL
360 370 380 390 400
380 390 400 410
pF1KE0 LVVTNRDTQETLLCMACVFEVSNSEHGAQHHIYRLVKD
::::::::: ::: : :::::.::.::::::::::.:
XP_011 QVVTNRDTQELLLCTAYVFEVSTSERGAQHHIYRLVRD
410 420 430 440
>>XP_011525708 (OMIM: 601729) PREDICTED: transcriptional (228 aa)
initn: 657 init1: 512 opt: 687 Z-score: 537.9 bits: 107.6 E(85289): 3.2e-23
Smith-Waterman score: 687; 59.0% identity (71.2% similar) in 212 aa overlap (5-209:30-228)
10 20 30
pF1KE0 MERMSDSADKPIDNDAEGVWSPDIEQSFQEALAIY
:..: :::::::::::::::::::::
XP_011 MGEPRAGAALDDGSGWTGSEEGSEEGTGGSEGAGGDGGPDAEGVWSPDIEQSFQEALAIY
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE0 PPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKSRDFHSKLK
:::::::::::::::::::::::::::::::::::::::::::::::::::::...::::
XP_011 PPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKSREIQSKLK
70 80 90 100 110 120
100 110 120 130 140
pF1KE0 ----DQTAKDKALQHMAAMSSAQIVSATAIHNKLGLPGIPRPTFPGAP---GFWPGMIQT
::..::::.: ::.:::::..:: ... ::: :: : : :: : .
XP_011 ALNVDQVSKDKAFQTMATMSSAQLISAPSLQAKLG------PTGPQASELFQFWSG--GS
130 140 150 160 170
150 160 170 180 190 200
pF1KE0 GQPGSSQDVKPFVQQAYPIQPAVTAPIPGFEPASAPAPSVPAWQGRSIGTTKLRLVEFSA
: : . ::::: : :. ..: : . :. : .: : : ... : : .
XP_011 GPPWNVPDVKPFSQT--PFTLSLTPPSTDL-PGRNSFPEAP--QQISPNVSLARTVSHGH
180 190 200 210 220
210 220 230 240 250 260
pF1KE0 FLEQQRDPDSYNKHLFVHIGHANHSYSDPLLESVDIRQIYDKFPEKKGGLKELFGKGPQN
:
XP_011 F
>>XP_011525707 (OMIM: 601729) PREDICTED: transcriptional (231 aa)
initn: 661 init1: 512 opt: 681 Z-score: 533.3 bits: 106.8 E(85289): 5.8e-23
Smith-Waterman score: 681; 58.4% identity (70.8% similar) in 209 aa overlap (5-209:30-231)
10 20 30
pF1KE0 MERMSDSADKPIDNDAEGVWSPDIEQSFQEALAIY
:..: :::::::::::::::::::::
XP_011 MGEPRAGAALDDGSGWTGSEEGSEEGTGGSEGAGGDGGPDAEGVWSPDIEQSFQEALAIY
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE0 PPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKSRDFHSKLK
:::::::::::::::::::::::::::::::::::::::::::::::::::::...::::
XP_011 PPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKSREIQSKLK
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE0 ----DQTAKDKALQHMAAMSSAQIVSATAIHNKLGLPGIPRPTFPGAPGFWPGMIQTGQP
::..::::.: ::.:::::..:: ... ::: : :: : .: :
XP_011 ALNVDQVSKDKAFQTMATMSSAQLISAPSLQAKLGPTGPQVVQASELFQFWSG--GSGPP
130 140 150 160 170
160 170 180 190 200 210
pF1KE0 GSSQDVKPFVQQAYPIQPAVTAPIPGFEPASAPAPSVPAWQGRSIGTTKLRLVEFSAFLE
. ::::: : :. ..: : . :. : .: : : ... : : . :
XP_011 WNVPDVKPFSQT--PFTLSLTPPSTDL-PGRNSFPEAP--QQISPNVSLARTVSHGHF
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE0 QQRDPDSYNKHLFVHIGHANHSYSDPLLESVDIRQIYDKFPEKKGGLKELFGKGPQNAFF
>>XP_006723492 (OMIM: 601729) PREDICTED: transcriptional (261 aa)
initn: 1117 init1: 667 opt: 676 Z-score: 528.9 bits: 106.2 E(85289): 1e-22
Smith-Waterman score: 1107; 68.0% identity (84.6% similar) in 247 aa overlap (174-411:15-261)
150 160 170 180 190 200
pF1KE0 GMIQTGQPGSSQDVKPFVQQAYPIQPAVTAPIPGFEPASAPAPSVPAWQGRSIGTTKLRL
: .. : :.:: ::::.:..::..:.:
XP_006 MATSNCKGGWERYEPPQALSPLPPPTPSPPAWQARGLGTARLQL
10 20 30 40
210 220 230 240 250 260
pF1KE0 VEFSAFLEQQRDPDSYNKHLFVHIGHANHSYSDPLLESVDIRQIYDKFPEKKGGLKELFG
::::::.: :::..::::::.. : . : :::::.::::::::::::::.::.
XP_006 VEFSAFVEPPDAVDSYQRHLFVHISQHCPSPGAPPLESVDVRQIYDKFPEKKGGLRELYD
50 60 70 80 90 100
270 280 290 300 310
pF1KE0 KGPQNAFFLVKFWADLNCNIQ-DDAGA--------FYGVTSQYESSENMTVTCSTKVCSF
.:: .:::::::::::: . . ..::: ::::.::::: :.::.:::.:::::
XP_006 RGPPHAFFLVKFWADLNWGPSGEEAGAGGSISSGGFYGVSSQYESLEHMTLTCSSKVCSF
110 120 130 140 150 160
320 330 340 350 360 370
pF1KE0 GKQVVEKVETEYARFENGRFVYRINRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILL
::::::::::: :..:.::::::. :::::::..::.:::..:::.:::::::::::::
XP_006 GKQVVEKVETERAQLEDGRFVYRLLRSPMCEYLVNFLHKLRQLPERYMMNSVLENFTILQ
170 180 190 200 210 220
380 390 400 410
pF1KE0 VVTNRDTQETLLCMACVFEVSNSEHGAQHHIYRLVKD
::::::::: ::: : :::::.::.::::::::::.:
XP_006 VVTNRDTQELLLCTAYVFEVSTSERGAQHHIYRLVRD
230 240 250 260
411 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 04:35:06 2016 done: Sat Nov 5 04:35:08 2016
Total Scan time: 8.890 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]