FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0911, 239 aa
  1>>>pF1KE0911 239 - 239 aa - 239 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.3710+/-0.000796; mu= 13.1936+/- 0.047
 mean_var=56.4887+/-11.453, 0's: 0 Z-trim(106.6): 14  B-trim: 503 in 1/49
 Lambda= 0.170645
 statistics sampled from 9070 (9078) to 9070 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.669), E-opt: 0.2 (0.279), width:  16
 Scan time:  2.030

The best scores are:                                      opt bits E(32554)
CCDS9646.1 EGLN3 gene_id:112399|Hs108|chr14        ( 239) 1663 417.4 4.2e-117
CCDS1595.1 EGLN1 gene_id:54583|Hs108|chr1          ( 426) 1043 264.8 6.3e-71
CCDS12567.1 EGLN2 gene_id:112398|Hs108|chr19       ( 407) 1002 254.7 6.6e-68
CCDS76671.1 EGLN3 gene_id:112399|Hs108|chr14       ( 145)  850 217.2 4.7e-57


>>CCDS9646.1 EGLN3 gene_id:112399|Hs108|chr14             (239 aa)
 initn: 1663 init1: 1663 opt: 1663  Z-score: 2215.9  bits: 417.4 E(32554): 4.2e-117
Smith-Waterman score: 1663; 100.0% identity (100.0% similar) in 239 aa overlap (1-239:1-239)

               10        20        30        40        50        60
pF1KE0 MPLGHIMRLDLEKIALEYIVPCLHEVGFCYLDNFLGEVVGDCVLERVKQLHCTGALRDGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 MPLGHIMRLDLEKIALEYIVPCLHEVGFCYLDNFLGEVVGDCVLERVKQLHCTGALRDGQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 LAGPRAGVSKRHLRGDQITWIGGNEEGCEAISFLLSLIDRLVLYCGSRLGKYYVKERSKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 LAGPRAGVSKRHLRGDQITWIGGNEEGCEAISFLLSLIDRLVLYCGSRLGKYYVKERSKA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 MVACYPGNGTGYVRHVDNPNGDGRCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 MVACYPGNGTGYVRHVDNPNGDGRCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEP
              130       140       150       160       170       180

              190       200       210       220       230         
pF1KE0 IFDRLLFFWSDRRNPHEVQPSYATRYAMTVWYFDAEERAEAKKKFRNLTRKTESALTED
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 IFDRLLFFWSDRRNPHEVQPSYATRYAMTVWYFDAEERAEAKKKFRNLTRKTESALTED
              190       200       210       220       230         

>>CCDS1595.1 EGLN1 gene_id:54583|Hs108|chr1               (426 aa)
 initn: 1032 init1: 854 opt: 1043  Z-score: 1386.9  bits: 264.8 E(32554): 6.3e-71
Smith-Waterman score: 1043; 64.3% identity (85.7% similar) in 224 aa overlap (2-225:181-403)

                                            10        20        30 
pF1KE0                              MPLGHIMRLDLEKIALEYIVPCLHEVGFCYL
                                     : :.   :   :.::::::::... :.: .
CCDS15 ARSSLFQEKANLYPPSNTPGDALSPGGGLRPNGQTKPLPALKLALEYIVPCMNKHGICVV
              160       170       180       190       200       210

              40        50        60        70        80        90 
pF1KE0 DNFLGEVVGDCVLERVKQLHCTGALRDGQLAGPRAGVSKRHLRGDQITWIGGNEEGCEAI
       :.:::. .:. . ..:. :: :: . ::::.. ..  ::  .:::.:::: :.: :::.:
CCDS15 DDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSK-DIRGDKITWIEGKEPGCETI
              220       230       240        250       260         

             100       110       120       130       140       150 
pF1KE0 SFLLSLIDRLVLYCGSRLGKYYVKERSKAMVACYPGNGTGYVRHVDNPNGDGRCITCIYY
       ..:.: .: :. .:...::.: .. :.:::::::::::::::::::::::::::.:::::
CCDS15 GLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYY
     270       280       290       300       310       320         

             160       170       180       190       200       210 
pF1KE0 LNKNWDAKLHGGILRIFPEGKSFIADVEPIFDRLLFFWSDRRNPHEVQPSYATRYAMTVW
       :::.::::. :::::::::::. .::.:: :::::::::::::::::::.::::::.:::
CCDS15 LNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVW
     330       340       350       360       370       380         

             220       230                  
pF1KE0 YFDAEERAEAKKKFRNLTRKTESALTED         
       ::::.:::.:: :.                       
CCDS15 YFDADERARAKVKYLTGEKGVRVELNKPSDSVGKDVF
     390       400       410       420      

>>CCDS12567.1 EGLN2 gene_id:112398|Hs108|chr19            (407 aa)
 initn: 1025 init1: 820 opt: 1002  Z-score: 1332.6  bits: 254.7 E(32554): 6.6e-68
Smith-Waterman score: 1002; 61.9% identity (86.0% similar) in 215 aa overlap (12-226:175-388)

                                  10        20        30        40 
pF1KE0                    MPLGHIMRLDLEKIALEYIVPCLHEVGFCYLDNFLGEVVGD
                                     :..::.:::::..  :.:  :.::: ..: 
CCDS12 EREGGMSCSCSSGSGEASAGLMEEALPSAPERLALDYIVPCMRYYGICVKDSFLGAALGG
          150       160       170       180       190       200    

              50        60        70        80        90       100 
pF1KE0 CVLERVKQLHCTGALRDGQLAGPRAGVSKRHLRGDQITWIGGNEEGCEAISFLLSLIDRL
        :: .:. :.  : ::::::.. :: .  : .:::::.:. :.: ::..:. :.. .: .
CCDS12 RVLAEVEALKRGGRLRDGQLVSQRA-IPPRSIRGDQIAWVEGHEPGCRSIGALMAHVDAV
          210       220        230       240       250       260   

             110       120       130       140       150       160 
pF1KE0 VLYCGSRLGKYYVKERSKAMVACYPGNGTGYVRHVDNPNGDGRCITCIYYLNKNWDAKLH
       . .:..:::.: .. :.::::::::::: :::::::::.:::::::::::::.:::.:.:
CCDS12 IRHCAGRLGSYVINGRTKAMVACYPGNGLGYVRHVDNPHGDGRCITCIYYLNQNWDVKVH
           270       280       290       300       310       320   

             170       180       190       200       210       220 
pF1KE0 GGILRIFPEGKSFIADVEPIFDRLLFFWSDRRNPHEVQPSYATRYAMTVWYFDAEERAEA
       ::.:.:::::.  .:..::.:::::.:::::::::::.:.::::::.:::::::.::: :
CCDS12 GGLLQIFPEGRPVVANIEPLFDRLLIFWSDRRNPHEVKPAYATRYAITVWYFDAKERAAA
           330       340       350       360       370       380   

             230               
pF1KE0 KKKFRNLTRKTESALTED      
       : :..                   
CCDS12 KDKYQLASGQKGVQVPVSQPPTPT
           390       400       

>>CCDS76671.1 EGLN3 gene_id:112399|Hs108|chr14            (145 aa)
 initn: 845 init1: 845 opt: 850  Z-score: 1137.8  bits: 217.2 E(32554): 4.7e-57
Smith-Waterman score: 850; 94.6% identity (96.1% similar) in 129 aa overlap (111-239:17-145)

               90       100       110       120       130       140
pF1KE0 IGGNEEGCEAISFLLSLIDRLVLYCGSRLGKYYVKERSKAMVACYPGNGTGYVRHVDNPN
                                     .: :    .:::::::::::::::::::::
CCDS76               MPLGHIMRLDLEKIALEYIVPCLHEAMVACYPGNGTGYVRHVDNPN
                             10        20        30        40      

              150       160       170       180       190       200
pF1KE0 GDGRCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEPIFDRLLFFWSDRRNPHEVQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 GDGRCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEPIFDRLLFFWSDRRNPHEVQP
         50        60        70        80        90       100      

              210       220       230         
pF1KE0 SYATRYAMTVWYFDAEERAEAKKKFRNLTRKTESALTED
       :::::::::::::::::::::::::::::::::::::::
CCDS76 SYATRYAMTVWYFDAEERAEAKKKFRNLTRKTESALTED
        110       120       130       140     




239 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 04:27:58 2016 done: Sat Nov  5 04:27:58 2016
 Total Scan time:  2.030 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]