Result of FASTA (ccds) for
pF1KE0900
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0900, 3418 aa
1>>>pF1KE0900 3418 - 3418 aa - 3418 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5637+/-0.00141; mu= 21.4922+/- 0.085
mean_var=91.3063+/-17.756, 0's: 0 Z-trim(100.1): 45 B-trim: 0 in 0/50
Lambda= 0.134222
statistics sampled from 5995 (6002) to 5995 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.494), E-opt: 0.2 (0.184), width: 16
Scan time: 10.400
The best scores are: opt bits E(32554)
CCDS9344.1 BRCA2 gene_id:675|Hs108|chr13 (3418) 22270 4324.6 0
>>CCDS9344.1 BRCA2 gene_id:675|Hs108|chr13 (3418 aa)
initn: 22270 init1: 22270 opt: 22270 Z-score: 23290.9 bits: 4324.6 E(32554): 0
Smith-Waterman score: 22270; 100.0% identity (100.0% similar) in 3418 aa overlap (1-3418:1-3418)
10 20 30 40 50 60
pF1KE0 MPIGSKERPTFFEIFKTRCNKADLGPISLNWFEELSSEAPPYNSEPAEESEHKNNNYEPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 MPIGSKERPTFFEIFKTRCNKADLGPISLNWFEELSSEAPPYNSEPAEESEHKNNNYEPN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 LFKTPQRKPSYNQLASTPIIFKEQGLTLPLYQSPVKELDKFKLDLGRNVPNSRHKSLRTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 LFKTPQRKPSYNQLASTPIIFKEQGLTLPLYQSPVKELDKFKLDLGRNVPNSRHKSLRTV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 KTKMDQADDVSCPLLNSCLSESPVVLQCTHVTPQRDKSVVCGSLFHTPKFVKGRQTPKHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 KTKMDQADDVSCPLLNSCLSESPVVLQCTHVTPQRDKSVVCGSLFHTPKFVKGRQTPKHI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 SESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETVFPHDTTANVKSYFSNHDESL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 SESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETVFPHDTTANVKSYFSNHDESL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KKNDRFIASVTDSENTNQREAASHGFGKTSGNSFKVNSCKDHIGKSMPNVLEDEVYETVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 KKNDRFIASVTDSENTNQREAASHGFGKTSGNSFKVNSCKDHIGKSMPNVLEDEVYETVV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 DTSEEDSFSLCFSKCRTKNLQKVRTSKTRKKIFHEANADECEKSKNQVKEKYSFVSEVEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 DTSEEDSFSLCFSKCRTKNLQKVRTSKTRKKIFHEANADECEKSKNQVKEKYSFVSEVEP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 NDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGAQMEKIPLLHISSCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 NDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLTLSGLNGAQMEKIPLLHISSCD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 QNISEKDLLDTENKRKKDFLTSENSLPRISSLPKSEKPLNEETVVNKRDEEQHLESHTDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 QNISEKDLLDTENKRKKDFLTSENSLPRISSLPKSEKPLNEETVVNKRDEEQHLESHTDC
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 ILAVKQAISGTSPVASSFQGIKKSIFRIRESPKETFNASFSGHMTDPNFKKETEASESGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 ILAVKQAISGTSPVASSFQGIKKSIFRIRESPKETFNASFSGHMTDPNFKKETEASESGL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 EIHTVCSQKEDSLCPNLIDNGSWPATTTQNSVALKNAGLISTLKKKTNKFIYAIHDETSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 EIHTVCSQKEDSLCPNLIDNGSWPATTTQNSVALKNAGLISTLKKKTNKFIYAIHDETSY
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE0 KGKKIPKDQKSELINCSAQFEANAFEAPLTFANADSGLLHSSVKRSCSQNDSEEPTLSLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 KGKKIPKDQKSELINCSAQFEANAFEAPLTFANADSGLLHSSVKRSCSQNDSEEPTLSLT
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE0 SSFGTILRKCSRNETCSNNTVISQDLDYKEAKCNKEKLQLFITPEADSLSCLQEGQCEND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 SSFGTILRKCSRNETCSNNTVISQDLDYKEAKCNKEKLQLFITPEADSLSCLQEGQCEND
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE0 PKSKKVSDIKEEVLAAACHPVQHSKVEYSDTDFQSQKSLLYDHENASTLILTPTSKDVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 PKSKKVSDIKEEVLAAACHPVQHSKVEYSDTDFQSQKSLLYDHENASTLILTPTSKDVLS
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE0 NLVMISRGKESYKMSDKLKGNNYESDVELTKNIPMEKNQDVCALNENYKNVELLPPEKYM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 NLVMISRGKESYKMSDKLKGNNYESDVELTKNIPMEKNQDVCALNENYKNVELLPPEKYM
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE0 RVASPSRKVQFNQNTNLRVIQKNQEETTSISKITVNPDSEELFSDNENNFVFQVANERNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 RVASPSRKVQFNQNTNLRVIQKNQEETTSISKITVNPDSEELFSDNENNFVFQVANERNN
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE0 LALGNTKELHETDLTCVNEPIFKNSTMVLYGDTGDKQATQVSIKKDLVYVLAEENKNSVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 LALGNTKELHETDLTCVNEPIFKNSTMVLYGDTGDKQATQVSIKKDLVYVLAEENKNSVK
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE0 QHIKMTLGQDLKSDISLNIDKIPEKNNDYMNKWAGLLGPISNHSFGGSFRTASNKEIKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 QHIKMTLGQDLKSDISLNIDKIPEKNNDYMNKWAGLLGPISNHSFGGSFRTASNKEIKLS
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE0 EHNIKKSKMFFKDIEEQYPTSLACVEIVNTLALDNQKKLSKPQSINTVSAHLQSSVVVSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 EHNIKKSKMFFKDIEEQYPTSLACVEIVNTLALDNQKKLSKPQSINTVSAHLQSSVVVSD
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE0 CKNSHITPQMLFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 CKNSHITPQMLFSKQDFNSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSYILQKS
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE0 TFEVPENQMTILKTTSEECRDADLHVIMNAPSIGQVDSSKQFEGTVEIKRKFAGLLKNDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 TFEVPENQMTILKTTSEECRDADLHVIMNAPSIGQVDSSKQFEGTVEIKRKFAGLLKNDC
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE0 NKSASGYLTDENEVGFRGFYSAHGTKLNVSTEALQKAVKLFSDIENISEETSAEVHPISL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 NKSASGYLTDENEVGFRGFYSAHGTKLNVSTEALQKAVKLFSDIENISEETSAEVHPISL
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE0 SSSKCHDSVVSMFKIENHNDKTVSEKNNKCQLILQNNIEMTTGTFVEEITENYKRNTENE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 SSSKCHDSVVSMFKIENHNDKTVSEKNNKCQLILQNNIEMTTGTFVEEITENYKRNTENE
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KE0 DNKYTAASRNSHNLEFDGSDSSKNDTVCIHKDETDLLFTDQHNICLKLSGQFMKEGNTQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 DNKYTAASRNSHNLEFDGSDSSKNDTVCIHKDETDLLFTDQHNICLKLSGQFMKEGNTQI
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KE0 KEDLSDLTFLEVAKAQEACHGNTSNKEQLTATKTEQNIKDFETSDTFFQTASGKNISVAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 KEDLSDLTFLEVAKAQEACHGNTSNKEQLTATKTEQNIKDFETSDTFFQTASGKNISVAK
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KE0 ESFNKIVNFFDQKPEELHNFSLNSELHSDIRKNKMDILSYEETDIVKHKILKESVPVGTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 ESFNKIVNFFDQKPEELHNFSLNSELHSDIRKNKMDILSYEETDIVKHKILKESVPVGTG
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KE0 NQLVTFQGQPERDEKIKEPTLLGFHTASGKKVKIAKESLDKVKNLFDEKEQGTSEITSFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 NQLVTFQGQPERDEKIKEPTLLGFHTASGKKVKIAKESLDKVKNLFDEKEQGTSEITSFS
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KE0 HQWAKTLKYREACKDLELACETIEITAAPKCKEMQNSLNNDKNLVSIETVVPPKLLSDNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 HQWAKTLKYREACKDLELACETIEITAAPKCKEMQNSLNNDKNLVSIETVVPPKLLSDNL
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KE0 CRQTENLKTSKSIFLKVKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 CRQTENLKTSKSIFLKVKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKTS
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KE0 VSQTSLLEAKKWLREGIFDGQPERINTADYVGNYLYENNSNSTIAENDKNHLSEKQDTYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 VSQTSLLEAKKWLREGIFDGQPERINTADYVGNYLYENNSNSTIAENDKNHLSEKQDTYL
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KE0 SNSSMSNSYSYHSDEVYNDSGYLSKNKLDSGIEPVLKNVEDQKNTSFSKVISNVKDANAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 SNSSMSNSYSYHSDEVYNDSGYLSKNKLDSGIEPVLKNVEDQKNTSFSKVISNVKDANAY
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KE0 PQTVNEDICVEELVTSSSPCKNKNAAIKLSISNSNNFEVGPPAFRIASGKIVCVSHETIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 PQTVNEDICVEELVTSSSPCKNKNAAIKLSISNSNNFEVGPPAFRIASGKIVCVSHETIK
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910 1920
pF1KE0 KVKDIFTDSFSKVIKENNENKSKICQTKIMAGCYEALDDSEDILHNSLDNDECSTHSHKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 KVKDIFTDSFSKVIKENNENKSKICQTKIMAGCYEALDDSEDILHNSLDNDECSTHSHKV
1870 1880 1890 1900 1910 1920
1930 1940 1950 1960 1970 1980
pF1KE0 FADIQSEEILQHNQNMSGLEKVSKISPCDVSLETSDICKCSIGKLHKSVSSANTCGIFST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 FADIQSEEILQHNQNMSGLEKVSKISPCDVSLETSDICKCSIGKLHKSVSSANTCGIFST
1930 1940 1950 1960 1970 1980
1990 2000 2010 2020 2030 2040
pF1KE0 ASGKSVQVSDASLQNARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTAIRTPEHLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 ASGKSVQVSDASLQNARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTAIRTPEHLI
1990 2000 2010 2020 2030 2040
2050 2060 2070 2080 2090 2100
pF1KE0 SQKGFSYNVVNSSAFSGFSTASGKQVSILESSLHKVKGVLEEFDLIRTEHSLHYSPTSRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 SQKGFSYNVVNSSAFSGFSTASGKQVSILESSLHKVKGVLEEFDLIRTEHSLHYSPTSRQ
2050 2060 2070 2080 2090 2100
2110 2120 2130 2140 2150 2160
pF1KE0 NVSKILPRVDKRNPEHCVNSEMEKTCSKEFKLSNNLNVEGGSSENNHSIKVSPYLSQFQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 NVSKILPRVDKRNPEHCVNSEMEKTCSKEFKLSNNLNVEGGSSENNHSIKVSPYLSQFQQ
2110 2120 2130 2140 2150 2160
2170 2180 2190 2200 2210 2220
pF1KE0 DKQQLVLGTKVSLVENIHVLGKEQASPKNVKMEIGKTETFSDVPVKTNIEVCSTYSKDSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 DKQQLVLGTKVSLVENIHVLGKEQASPKNVKMEIGKTETFSDVPVKTNIEVCSTYSKDSE
2170 2180 2190 2200 2210 2220
2230 2240 2250 2260 2270 2280
pF1KE0 NYFETEAVEIAKAFMEDDELTDSKLPSHATHSLFTCPENEEMVLSNSRIGKRRGEPLILV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 NYFETEAVEIAKAFMEDDELTDSKLPSHATHSLFTCPENEEMVLSNSRIGKRRGEPLILV
2230 2240 2250 2260 2270 2280
2290 2300 2310 2320 2330 2340
pF1KE0 GEPSIKRNLLNEFDRIIENQEKSLKASKSTPDGTIKDRRLFMHHVSLEPITCVPFRTTKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 GEPSIKRNLLNEFDRIIENQEKSLKASKSTPDGTIKDRRLFMHHVSLEPITCVPFRTTKE
2290 2300 2310 2320 2330 2340
2350 2360 2370 2380 2390 2400
pF1KE0 RQEIQNPNFTAPGQEFLSKSHLYEHLTLEKSSSNLAVSGHPFYQVSATRNEKMRHLITTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 RQEIQNPNFTAPGQEFLSKSHLYEHLTLEKSSSNLAVSGHPFYQVSATRNEKMRHLITTG
2350 2360 2370 2380 2390 2400
2410 2420 2430 2440 2450 2460
pF1KE0 RPTKVFVPPFKTKSHFHRVEQCVRNINLEENRQKQNIDGHGSDDSKNKINDNEIHQFNKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 RPTKVFVPPFKTKSHFHRVEQCVRNINLEENRQKQNIDGHGSDDSKNKINDNEIHQFNKN
2410 2420 2430 2440 2450 2460
2470 2480 2490 2500 2510 2520
pF1KE0 NSNQAAAVTFTKCEEEPLDLITSLQNARDIQDMRIKKKQRQRVFPQPGSLYLAKTSTLPR
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 NSNQAVAVTFTKCEEEPLDLITSLQNARDIQDMRIKKKQRQRVFPQPGSLYLAKTSTLPR
2470 2480 2490 2500 2510 2520
2530 2540 2550 2560 2570 2580
pF1KE0 ISLKAAVGGQVPSACSHKQLYTYGVSKHCIKINSKNAESFQFHTEDYFGKESLWTGKGIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 ISLKAAVGGQVPSACSHKQLYTYGVSKHCIKINSKNAESFQFHTEDYFGKESLWTGKGIQ
2530 2540 2550 2560 2570 2580
2590 2600 2610 2620 2630 2640
pF1KE0 LADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 LADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPK
2590 2600 2610 2620 2630 2640
2650 2660 2670 2680 2690 2700
pF1KE0 EFANRCLSPERVLLQLKYRYDTEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 EFANRCLSPERVLLQLKYRYDTEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANI
2650 2660 2670 2680 2690 2700
2710 2720 2730 2740 2750 2760
pF1KE0 SETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 SETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVG
2710 2720 2730 2740 2750 2760
2770 2780 2790 2800 2810 2820
pF1KE0 SPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 SPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDV
2770 2780 2790 2800 2810 2820
2830 2840 2850 2860 2870 2880
pF1KE0 IIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEHEENT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 IIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEHEENT
2830 2840 2850 2860 2870 2880
2890 2900 2910 2920 2930 2940
pF1KE0 TKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAYLEGYFSEEQLRALNNHRQMLNDKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 TKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAYLEGYFSEEQLRALNNHRQMLNDKK
2890 2900 2910 2920 2930 2940
2950 2960 2970 2980 2990 3000
pF1KE0 QAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 QAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSDLYSLL
2950 2960 2970 2980 2990 3000
3010 3020 3030 3040 3050 3060
pF1KE0 TEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQIYQPREPLHFSKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 TEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQIYQPREPLHFSKF
3010 3020 3030 3040 3050 3060
3070 3080 3090 3100 3110 3120
pF1KE0 LDPDFQPSCSEVDLIGFVVSVVKKTGLAPFVYLSDECYNLLAIKFWIDLNEDIIKPHMLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 LDPDFQPSCSEVDLIGFVVSVVKKTGLAPFVYLSDECYNLLAIKFWIDLNEDIIKPHMLI
3070 3080 3090 3100 3110 3120
3130 3140 3150 3160 3170 3180
pF1KE0 AASNLQWRPESKSGLLTLFAGDFSVFSASPKEGHFQETFNKMKNTVENIDILCNEAENKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 AASNLQWRPESKSGLLTLFAGDFSVFSASPKEGHFQETFNKMKNTVENIDILCNEAENKL
3130 3140 3150 3160 3170 3180
3190 3200 3210 3220 3230 3240
pF1KE0 MHILHANDPKWSTPTKDCTSGPYTAQIIPGTGNKLLMSSPNCEIYYQSPLSLCMAKRKSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 MHILHANDPKWSTPTKDCTSGPYTAQIIPGTGNKLLMSSPNCEIYYQSPLSLCMAKRKSV
3190 3200 3210 3220 3230 3240
3250 3260 3270 3280 3290 3300
pF1KE0 STPVSAQMTSKSCKGEKEIDDQKNCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 STPVSAQMTSKSCKGEKEIDDQKNCKKRRALDFLSRLPLPPPVSPICTFVSPAAQKAFQP
3250 3260 3270 3280 3290 3300
3310 3320 3330 3340 3350 3360
pF1KE0 PRSCGTKYETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINTQALLSGSTGEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 PRSCGTKYETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINTQALLSGSTGEK
3310 3320 3330 3340 3350 3360
3370 3380 3390 3400 3410
pF1KE0 QFISVSESTRTAPTSSEDYLRLKRRCTTSLIKEQESSQASTEECEKNKQDTITTKKYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 QFISVSESTRTAPTSSEDYLRLKRRCTTSLIKEQESSQASTEECEKNKQDTITTKKYI
3370 3380 3390 3400 3410
3418 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Dec 21 11:15:14 2016 done: Wed Dec 21 11:15:16 2016
Total Scan time: 10.400 Total Display time: 0.650
Function used was FASTA [36.3.4 Apr, 2011]