Result of FASTA (ccds) for
pF1KE0696
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0696, 404 aa
1>>>pF1KE0696 404 - 404 aa - 404 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.0274+/-0.000852; mu= 8.8987+/- 0.051
mean_var=98.8841+/-20.055, 0's: 0 Z-trim(109.4): 82 B-trim: 436 in 1/50
Lambda= 0.128977
statistics sampled from 10744 (10829) to 10744 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.697), E-opt: 0.2 (0.333), width: 16
Scan time: 2.720
The best scores are: opt bits E(32554)
CCDS7629.1 PLEKHA1 gene_id:59338|Hs108|chr10 ( 404) 2703 513.2 1.7e-145
CCDS55730.1 PLEKHA1 gene_id:59338|Hs108|chr10 ( 334) 2023 386.6 1.8e-107
CCDS81517.1 PLEKHA1 gene_id:59338|Hs108|chr10 ( 383) 2022 386.5 2.3e-107
CCDS75732.1 PLEKHA2 gene_id:59339|Hs108|chr8 ( 425) 883 174.5 1.6e-43
>>CCDS7629.1 PLEKHA1 gene_id:59338|Hs108|chr10 (404 aa)
initn: 2703 init1: 2703 opt: 2703 Z-score: 2725.4 bits: 513.2 E(32554): 1.7e-145
Smith-Waterman score: 2703; 100.0% identity (100.0% similar) in 404 aa overlap (1-404:1-404)
10 20 30 40 50 60
pF1KE0 MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 LTYISKVSDATKLRPKAEFCFVMNAGMRKYFLQANDQQDLVEWVNVLNKAIKITVPKQSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 LTYISKVSDATKLRPKAEFCFVMNAGMRKYFLQANDQQDLVEWVNVLNKAIKITVPKQSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 SQPNSDNLSRHGECGKKQVSYRTDIVGGVPIITPTQKEEVNECGESIDRNNLKRSQSHLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 SQPNSDNLSRHGECGKKQVSYRTDIVGGVPIITPTQKEEVNECGESIDRNNLKRSQSHLP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 YFTPKPPQDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 YFTPKPPQDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 HKVQECKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQRGPGRSASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 HKVQECKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQRGPGRSASS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 EHPPGPSESKHAFRPTNAATATSHSTASRSNSLVSTFTMEKRGFYESLAKVKPGNFKVQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 EHPPGPSESKHAFRPTNAATATSHSTASRSNSLVSTFTMEKRGFYESLAKVKPGNFKVQT
310 320 330 340 350 360
370 380 390 400
pF1KE0 VSPREPASKVTEQALLRPQSKNGPQEKDCDLVDLDDASLPVSDV
::::::::::::::::::::::::::::::::::::::::::::
CCDS76 VSPREPASKVTEQALLRPQSKNGPQEKDCDLVDLDDASLPVSDV
370 380 390 400
>>CCDS55730.1 PLEKHA1 gene_id:59338|Hs108|chr10 (334 aa)
initn: 2022 init1: 2022 opt: 2023 Z-score: 2042.9 bits: 386.6 E(32554): 1.8e-107
Smith-Waterman score: 2023; 92.4% identity (94.6% similar) in 331 aa overlap (1-331:1-331)
10 20 30 40 50 60
pF1KE0 MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 LTYISKVSDATKLRPKAEFCFVMNAGMRKYFLQANDQQDLVEWVNVLNKAIKITVPKQSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LTYISKVSDATKLRPKAEFCFVMNAGMRKYFLQANDQQDLVEWVNVLNKAIKITVPKQSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 SQPNSDNLSRHGECGKKQVSYRTDIVGGVPIITPTQKEEVNECGESIDRNNLKRSQSHLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SQPNSDNLSRHGECGKKQVSYRTDIVGGVPIITPTQKEEVNECGESIDRNNLKRSQSHLP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 YFTPKPPQDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 YFTPKPPQDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 HKVQECKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQRGPGRSASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 HKVQECKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQRGPGRSASS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 EHPPGPSESKHAFRPTNAATATSHSTASRSNSLVSTFTMEKRGFYESLAKVKPGNFKVQT
. . : :. : : ..:..:
CCDS55 MRQARRLSNPCIQRYTSRAGECSTYVGSHANVPS
310 320 330
370 380 390 400
pF1KE0 VSPREPASKVTEQALLRPQSKNGPQEKDCDLVDLDDASLPVSDV
>>CCDS81517.1 PLEKHA1 gene_id:59338|Hs108|chr10 (383 aa)
initn: 2022 init1: 2022 opt: 2022 Z-score: 2041.0 bits: 386.5 E(32554): 2.3e-107
Smith-Waterman score: 2022; 100.0% identity (100.0% similar) in 300 aa overlap (1-300:1-300)
10 20 30 40 50 60
pF1KE0 MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 LTYISKVSDATKLRPKAEFCFVMNAGMRKYFLQANDQQDLVEWVNVLNKAIKITVPKQSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 LTYISKVSDATKLRPKAEFCFVMNAGMRKYFLQANDQQDLVEWVNVLNKAIKITVPKQSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 SQPNSDNLSRHGECGKKQVSYRTDIVGGVPIITPTQKEEVNECGESIDRNNLKRSQSHLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 SQPNSDNLSRHGECGKKQVSYRTDIVGGVPIITPTQKEEVNECGESIDRNNLKRSQSHLP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 YFTPKPPQDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 YFTPKPPQDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 HKVQECKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQRGPGRSASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 HKVQECKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQRGPGRSASS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 EHPPGPSESKHAFRPTNAATATSHSTASRSNSLVSTFTMEKRGFYESLAKVKPGNFKVQT
CCDS81 MRQARRLSNPCIQRSIPPVLQNPNTLSVLPTQPPPPHIPQPLAATLWSQPLPWRSEDFTS
310 320 330 340 350 360
>>CCDS75732.1 PLEKHA2 gene_id:59339|Hs108|chr8 (425 aa)
initn: 1119 init1: 382 opt: 883 Z-score: 894.8 bits: 174.5 E(32554): 1.6e-43
Smith-Waterman score: 1124; 47.0% identity (69.5% similar) in 430 aa overlap (1-404:1-425)
10 20 30 40 50 60
pF1KE0 MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIK
::::::::::::::::::.:::::::::::::::. . ..::::::::: :.. :::..
CCDS75 MPYVDRQNRICGFLDIEEHENSGKFLRRYFILDTQANCLLWYMDNPQNLAMGAGAVGALQ
10 20 30 40 50 60
70 80 90 100 110
pF1KE0 LTYISKVSDAT-KLRPKAEFCFVMNAGMRKYFLQANDQQDLVEWVNVLNKAIKITVPKQS
:::::::: :: : .::. ::::.:: ..::::::::.:. .::..::.: :::::: .
CCDS75 LTYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDMKDWVEALNQASKITVPKGG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 DSQPNSDNLSRHGE----CGKKQVSYRTDIVGGVPIITPTQKE--EVNECGESIDRNNLK
... :. . : ::.:.:.:.::: . :: ... . .: .: ... :.
CCDS75 GLPMTTEVLKSLAAPPALEKKPQVAYKTEIIGGVVVHTPISQNGGDGQEGSEPGSHTILR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 RSQSHLPYFTPKPPQDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLR
::::..: . .::.::::::: : :.::::.: ::. :: ::: : ..::::
CCDS75 RSQSYIPTSGCRASTGPPLIKSGYCVKQGNVRKSWKRRFFALDDFTICYFKCEQDREPLR
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE0 VIPLKEVHKVQEC--KQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQ
.: ::.: :..:: :..:..::::::::.:.::::::::::::.:::::: ...:. :
CCDS75 TIFLKDVLKTHECLVKSGDLLMRDNLFEIITSSRTFYVQADSPEDMHSWIKEIGAAVQAL
250 260 270 280 290 300
300 310 320 330
pF1KE0 R-GP-----GRSASSEHP------PGPSESKHAFRPTNAATATSHSTASRSNSLVSTFTM
. : .:: : .: ::. :: . .. : ..: .
CCDS75 KCHPRETSFSRSISLTRPGSSSLSSGPNSILCRGRPPLEEKKALCKAPSVASSWQPWTPV
310 320 330 340 350 360
340 350 360 370 380 390
pF1KE0 EKRGFYESLAKVKPGNFKVQTV-SPRE---PASKVTEQALLRPQSK-NGPQEKDCDLVDL
. : :.: . ::. . ... .:: : : .. .: .:. . :.:: . .:
CCDS75 PQAG--EKL--LPPGDTSEDSLFTPRPGEGSAPGVLPSSRIRHRSEPQHPKEKPF-MFNL
370 380 390 400 410
400
pF1KE0 DDASLPVSDV
:: .. .:::
CCDS75 DDENIRTSDV
420
404 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 02:50:13 2016 done: Sat Nov 5 02:50:13 2016
Total Scan time: 2.720 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]