Result of FASTA (ccds) for
pF1KE0630
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0630, 371 aa
1>>>pF1KE0630 371 - 371 aa - 371 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3236+/-0.000717; mu= 9.6551+/- 0.043
mean_var=155.0021+/-31.120, 0's: 0 Z-trim(115.5): 26 B-trim: 3 in 1/52
Lambda= 0.103016
statistics sampled from 16004 (16025) to 16004 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.803), E-opt: 0.2 (0.492), width: 16
Scan time: 2.740
The best scores are: opt bits E(32554)
CCDS10455.1 NOXO1 gene_id:124056|Hs108|chr16 ( 371) 2548 389.7 2.1e-108
CCDS10454.1 NOXO1 gene_id:124056|Hs108|chr16 ( 370) 2530 387.1 1.4e-107
CCDS42101.1 NOXO1 gene_id:124056|Hs108|chr16 ( 376) 2528 386.8 1.7e-107
CCDS58406.1 NOXO1 gene_id:124056|Hs108|chr16 ( 375) 2510 384.1 1.1e-106
>>CCDS10455.1 NOXO1 gene_id:124056|Hs108|chr16 (371 aa)
initn: 2548 init1: 2548 opt: 2548 Z-score: 2059.6 bits: 389.7 E(32554): 2.1e-108
Smith-Waterman score: 2548; 100.0% identity (100.0% similar) in 371 aa overlap (1-371:1-371)
10 20 30 40 50 60
pF1KE0 MAGPRYPVSVQGAALVQIKRLQTFAFSVRWSDGSDTFVRRSWDEFRQLKKTLKETFPVEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MAGPRYPVSVQGAALVQIKRLQTFAFSVRWSDGSDTFVRRSWDEFRQLKKTLKETFPVEA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 GLLRRSDRVLPKLLDAPLLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTITGFFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GLLRRSDRVLPKLLDAPLLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTITGFFA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 PQPLDLEPALPPGSRVILPTPEEQPLSRAAGRLSIHSLEAQSLRCLQPFCTQDTRDRPFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PQPLDLEPALPPGSRVILPTPEEQPLSRAAGRLSIHSLEAQSLRCLQPFCTQDTRDRPFQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 AQAQESLDVLLRHPSGWWLVENEDRQTAWFPAPYLEEAAPGQGREGGPSLGSSGPQFCAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AQAQESLDVLLRHPSGWWLVENEDRQTAWFPAPYLEEAAPGQGREGGPSLGSSGPQFCAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 RAYESSRADELSVPAGARVRVLETSDRGWWLCRYGDRAGLLPAVLLRPEGLGALLSGTGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RAYESSRADELSVPAGARVRVLETSDRGWWLCRYGDRAGLLPAVLLRPEGLGALLSGTGF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 RGGDDPAGEARGFPEPSQATAPPPTVPTRPSPGAIQSRCCTVTRRALERRPRRQGRPRGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RGGDDPAGEARGFPEPSQATAPPPTVPTRPSPGAIQSRCCTVTRRALERRPRRQGRPRGC
310 320 330 340 350 360
370
pF1KE0 VDSVPHPTTEQ
:::::::::::
CCDS10 VDSVPHPTTEQ
370
>>CCDS10454.1 NOXO1 gene_id:124056|Hs108|chr16 (370 aa)
initn: 2215 init1: 2215 opt: 2530 Z-score: 2045.1 bits: 387.1 E(32554): 1.4e-107
Smith-Waterman score: 2530; 99.7% identity (99.7% similar) in 371 aa overlap (1-371:1-370)
10 20 30 40 50 60
pF1KE0 MAGPRYPVSVQGAALVQIKRLQTFAFSVRWSDGSDTFVRRSWDEFRQLKKTLKETFPVEA
::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
CCDS10 MAGPRYPVSVQGAALVQIKRLQTFAFSVRWSDGSDTFVRRSWDEFRQLK-TLKETFPVEA
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 GLLRRSDRVLPKLLDAPLLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTITGFFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GLLRRSDRVLPKLLDAPLLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTITGFFA
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 PQPLDLEPALPPGSRVILPTPEEQPLSRAAGRLSIHSLEAQSLRCLQPFCTQDTRDRPFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PQPLDLEPALPPGSRVILPTPEEQPLSRAAGRLSIHSLEAQSLRCLQPFCTQDTRDRPFQ
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE0 AQAQESLDVLLRHPSGWWLVENEDRQTAWFPAPYLEEAAPGQGREGGPSLGSSGPQFCAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AQAQESLDVLLRHPSGWWLVENEDRQTAWFPAPYLEEAAPGQGREGGPSLGSSGPQFCAS
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE0 RAYESSRADELSVPAGARVRVLETSDRGWWLCRYGDRAGLLPAVLLRPEGLGALLSGTGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RAYESSRADELSVPAGARVRVLETSDRGWWLCRYGDRAGLLPAVLLRPEGLGALLSGTGF
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE0 RGGDDPAGEARGFPEPSQATAPPPTVPTRPSPGAIQSRCCTVTRRALERRPRRQGRPRGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RGGDDPAGEARGFPEPSQATAPPPTVPTRPSPGAIQSRCCTVTRRALERRPRRQGRPRGC
300 310 320 330 340 350
370
pF1KE0 VDSVPHPTTEQ
:::::::::::
CCDS10 VDSVPHPTTEQ
360 370
>>CCDS42101.1 NOXO1 gene_id:124056|Hs108|chr16 (376 aa)
initn: 2065 init1: 2065 opt: 2528 Z-score: 2043.4 bits: 386.8 E(32554): 1.7e-107
Smith-Waterman score: 2528; 98.7% identity (98.7% similar) in 376 aa overlap (1-371:1-376)
10 20 30 40 50 60
pF1KE0 MAGPRYPVSVQGAALVQIKRLQTFAFSVRWSDGSDTFVRRSWDEFRQLKKTLKETFPVEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MAGPRYPVSVQGAALVQIKRLQTFAFSVRWSDGSDTFVRRSWDEFRQLKKTLKETFPVEA
10 20 30 40 50 60
70 80 90 100 110
pF1KE0 GLLRRSDRVLPKLL-----DAPLLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTI
:::::::::::::: :::::::::::::::::::::::::::::::::::::::::
CCDS42 GLLRRSDRVLPKLLGQASLDAPLLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTI
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 TGFFAPQPLDLEPALPPGSRVILPTPEEQPLSRAAGRLSIHSLEAQSLRCLQPFCTQDTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TGFFAPQPLDLEPALPPGSRVILPTPEEQPLSRAAGRLSIHSLEAQSLRCLQPFCTQDTR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 DRPFQAQAQESLDVLLRHPSGWWLVENEDRQTAWFPAPYLEEAAPGQGREGGPSLGSSGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 DRPFQAQAQESLDVLLRHPSGWWLVENEDRQTAWFPAPYLEEAAPGQGREGGPSLGSSGP
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE0 QFCASRAYESSRADELSVPAGARVRVLETSDRGWWLCRYGDRAGLLPAVLLRPEGLGALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 QFCASRAYESSRADELSVPAGARVRVLETSDRGWWLCRYGDRAGLLPAVLLRPEGLGALL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE0 SGTGFRGGDDPAGEARGFPEPSQATAPPPTVPTRPSPGAIQSRCCTVTRRALERRPRRQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SGTGFRGGDDPAGEARGFPEPSQATAPPPTVPTRPSPGAIQSRCCTVTRRALERRPRRQG
310 320 330 340 350 360
360 370
pF1KE0 RPRGCVDSVPHPTTEQ
::::::::::::::::
CCDS42 RPRGCVDSVPHPTTEQ
370
>>CCDS58406.1 NOXO1 gene_id:124056|Hs108|chr16 (375 aa)
initn: 2384 init1: 2065 opt: 2510 Z-score: 2029.0 bits: 384.1 E(32554): 1.1e-106
Smith-Waterman score: 2510; 98.4% identity (98.4% similar) in 376 aa overlap (1-371:1-375)
10 20 30 40 50 60
pF1KE0 MAGPRYPVSVQGAALVQIKRLQTFAFSVRWSDGSDTFVRRSWDEFRQLKKTLKETFPVEA
::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
CCDS58 MAGPRYPVSVQGAALVQIKRLQTFAFSVRWSDGSDTFVRRSWDEFRQLK-TLKETFPVEA
10 20 30 40 50
70 80 90 100 110
pF1KE0 GLLRRSDRVLPKLL-----DAPLLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTI
:::::::::::::: :::::::::::::::::::::::::::::::::::::::::
CCDS58 GLLRRSDRVLPKLLGQASLDAPLLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTI
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 TGFFAPQPLDLEPALPPGSRVILPTPEEQPLSRAAGRLSIHSLEAQSLRCLQPFCTQDTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TGFFAPQPLDLEPALPPGSRVILPTPEEQPLSRAAGRLSIHSLEAQSLRCLQPFCTQDTR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 DRPFQAQAQESLDVLLRHPSGWWLVENEDRQTAWFPAPYLEEAAPGQGREGGPSLGSSGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DRPFQAQAQESLDVLLRHPSGWWLVENEDRQTAWFPAPYLEEAAPGQGREGGPSLGSSGP
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE0 QFCASRAYESSRADELSVPAGARVRVLETSDRGWWLCRYGDRAGLLPAVLLRPEGLGALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QFCASRAYESSRADELSVPAGARVRVLETSDRGWWLCRYGDRAGLLPAVLLRPEGLGALL
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE0 SGTGFRGGDDPAGEARGFPEPSQATAPPPTVPTRPSPGAIQSRCCTVTRRALERRPRRQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SGTGFRGGDDPAGEARGFPEPSQATAPPPTVPTRPSPGAIQSRCCTVTRRALERRPRRQG
300 310 320 330 340 350
360 370
pF1KE0 RPRGCVDSVPHPTTEQ
::::::::::::::::
CCDS58 RPRGCVDSVPHPTTEQ
360 370
371 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 19:35:31 2016 done: Wed Nov 2 19:35:31 2016
Total Scan time: 2.740 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]