Result of FASTA (omim) for
pF1KE0626
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0626, 372 aa
1>>>pF1KE0626 372 - 372 aa - 372 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.0858+/-0.000465; mu= 7.6606+/- 0.029
mean_var=140.1823+/-28.942, 0's: 0 Z-trim(113.7): 145 B-trim: 945 in 2/53
Lambda= 0.108325
statistics sampled from 23020 (23209) to 23020 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.628), E-opt: 0.2 (0.272), width: 16
Scan time: 7.650
The best scores are: opt bits E(85289)
NP_115910 (OMIM: 608975) partitioning defective 6 ( 372) 2421 390.4 3.6e-108
NP_115899 (OMIM: 608976) partitioning defective 6 ( 376) 1331 220.0 6.8e-57
NP_058644 (OMIM: 607484) partitioning defective 6 ( 346) 1096 183.3 7.3e-46
NP_001032358 (OMIM: 607484) partitioning defective ( 345) 1085 181.6 2.4e-45
XP_016878750 (OMIM: 607484) PREDICTED: partitionin ( 341) 1053 176.6 7.6e-44
XP_011521398 (OMIM: 607484) PREDICTED: partitionin ( 353) 773 132.8 1.2e-30
XP_011521397 (OMIM: 607484) PREDICTED: partitionin ( 356) 773 132.8 1.2e-30
XP_005256034 (OMIM: 607484) PREDICTED: partitionin ( 357) 773 132.8 1.2e-30
>>NP_115910 (OMIM: 608975) partitioning defective 6 homo (372 aa)
initn: 2421 init1: 2421 opt: 2421 Z-score: 2063.0 bits: 390.4 E(85289): 3.6e-108
Smith-Waterman score: 2421; 100.0% identity (100.0% similar) in 372 aa overlap (1-372:1-372)
10 20 30 40 50 60
pF1KE0 MNRSHRHGAGSGCLGTMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 MNRSHRHGAGSGCLGTMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 GYADIHGDLLPINNDDNYHKAVSTANPLLRIFIQKKEEADYSAFGTDTLIKKKNVLTNVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 GYADIHGDLLPINNDDNYHKAVSTANPLLRIFIQKKEEADYSAFGTDTLIKKKNVLTNVL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 RPDNHRKKPHIVISMPQDFRPVSSIIDVDILPETHRRVRLYKYGTEKPLGFYIRDGSSVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 RPDNHRKKPHIVISMPQDFRPVSSIIDVDILPETHRRVRLYKYGTEKPLGFYIRDGSSVR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 VTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 VTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 NLIITVRPANQRNNVVRNSRTSGSSGQSTDNSLLGYPQQIEPSFEPEDEDSEEDDIIIED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 NLIITVRPANQRNNVVRNSRTSGSSGQSTDNSLLGYPQQIEPSFEPEDEDSEEDDIIIED
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 NGVPQQIPKAVPNTESLESLTQIELSFESGQNGFIPSNEVSLAAIASSSNTEFETHAPDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 NGVPQQIPKAVPNTESLESLTQIELSFESGQNGFIPSNEVSLAAIASSSNTEFETHAPDQ
310 320 330 340 350 360
370
pF1KE0 KLLEEDGTIITL
::::::::::::
NP_115 KLLEEDGTIITL
370
>>NP_115899 (OMIM: 608976) partitioning defective 6 homo (376 aa)
initn: 1306 init1: 802 opt: 1331 Z-score: 1142.4 bits: 220.0 E(85289): 6.8e-57
Smith-Waterman score: 1331; 64.2% identity (86.4% similar) in 316 aa overlap (1-309:1-314)
10 20 30 40 50
pF1KE0 MNRS-HRHGAGS--GCLGTMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVD
:::: :. . : ...:::::::::::::::.: ::::::.:: :. :.:.: : :
NP_115 MNRSFHKSQTLRFYDC-SAVEVKSKFGAEFRRFSLDRHKPGKFEDFYKLVVHTHHISNSD
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 VLVGYADIHGDLLPINNDDNYHKAVSTANPLLRIFIQKKEEADYSAFGTDTLIKKKNVLT
: .::::.::::::::::::. ::::.::::::.::::.:::. ...:. .: ... .:
NP_115 VTIGYADVHGDLLPINNDDNFCKAVSSANPLLRVFIQKREEAERGSLGAGSLCRRRRAL-
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 NVLRPDNHRKKPHIVISMPQDFRPVSSIIDVDILPETHRRVRLYKYGTEKPLGFYIRDGS
..:: .. :.. :. :..:.::::::::::::..:::::::::...: :::::::::::.
NP_115 GALRDEGPRRRAHLDIGLPRDFRPVSSIIDVDLVPETHRRVRLHRHGCEKPLGFYIRDGA
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 SVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIA
:::::::::::::::::::.::::::.:::::::::::::::::::.::.::::::::::
NP_115 SVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE0 NSRNLIITVRPANQRNNVVRNSRTSGSSGQSTDNS--LLGYPQ-QIEPSFEPEDEDSEED
::.:::.::.::::::::::..:. :::: .:.. ..: : .. .:.:.. .:.::
NP_115 NSHNLIVTVKPANQRNNVVRGGRALGSSGPPSDGTAGFVGPPAPRVLQNFHPDEAESDED
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE0 -DIIIEDNGVPQQIPKAVPNTESLESLTQIELSFESGQNGFIPSNEVSLAAIASSSNTEF
:..:: . : . :.
NP_115 NDVVIEGTLEPARPPQTPGAPAGSLSRVNGAGLAQRLQRDLALDGGLQRLLSSLRADPRH
300 310 320 330 340 350
>>NP_058644 (OMIM: 607484) partitioning defective 6 homo (346 aa)
initn: 1046 init1: 715 opt: 1096 Z-score: 944.4 bits: 183.3 E(85289): 7.3e-46
Smith-Waterman score: 1111; 57.7% identity (78.5% similar) in 317 aa overlap (1-308:1-303)
10 20 30 40 50 60
pF1KE0 MNRSHRHGAGSGCLGTMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLV
: : .: : : . .:::::: ::::::.: :.. . :.:: ::. ::.::..:::.
NP_058 MARPQRTPARSPD-SIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLL
10 20 30 40 50
70 80 90 100 110
pF1KE0 GYADIHGDLLPINNDDNYHKAVSTANPLLRIFIQKKEEADYS--AFGTDTLIKKKNVLTN
::.: ::::::..:::. :.:.... : ::...::. ::: : ::....: ..:. :
NP_058 GYTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKRAEADSSGLAFASNSLQRRKKGL--
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 VLRPDNH-RKKPHIVISMPQDFRPVSSIIDVDILPETHRRVRLYKYGTEKPLGFYIRDGS
.::: : .: ..::.::::: :::.::::.::::::::::.:.:...:::::::::
NP_058 LLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGM
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 SVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIA
::::.:.:::.:::::::::: ::::.:::::::.::.::::::::.::.::::::::.:
NP_058 SVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE0 NSRNLIITVRPANQRNNVVRNSRTSGSSGQSTDNSLLGYPQQIEPSFEPEDEDSEEDDII
::.:::.::.:::::::::: :.::. : : : :: : :.. .:..
NP_058 NSHNLIVTVKPANQRNNVVR-----GASGRLTGPPSAG-PGPAEP-----DSDDDSSDLV
240 250 260 270 280
300 310 320 330 340 350
pF1KE0 IED------NGVPQQIPKAVPNTESLESLTQIELSFESGQNGFIPSNEVSLAAIASSSNT
::. ::. : :
NP_058 IENRQPPSSNGLSQGPPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGSRIRGDGSGFSL
290 300 310 320 330 340
>>NP_001032358 (OMIM: 607484) partitioning defective 6 h (345 aa)
initn: 1007 init1: 1007 opt: 1085 Z-score: 935.1 bits: 181.6 E(85289): 2.4e-45
Smith-Waterman score: 1100; 57.7% identity (78.5% similar) in 317 aa overlap (1-308:1-302)
10 20 30 40 50 60
pF1KE0 MNRSHRHGAGSGCLGTMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLV
: : .: : : . .:::::: ::::::.: :.. . :.:: ::. ::.::..:::.
NP_001 MARPQRTPARSPD-SIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLL
10 20 30 40 50
70 80 90 100 110
pF1KE0 GYADIHGDLLPINNDDNYHKAVSTANPLLRIFIQKKEEADYS--AFGTDTLIKKKNVLTN
::.: ::::::..:::. :.:.... : ::...::.: :: : ::....: ..:. :
NP_001 GYTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKRE-ADSSGLAFASNSLQRRKKGL--
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 VLRPDNH-RKKPHIVISMPQDFRPVSSIIDVDILPETHRRVRLYKYGTEKPLGFYIRDGS
.::: : .: ..::.::::: :::.::::.::::::::::.:.:...:::::::::
NP_001 LLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGM
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 SVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIA
::::.:.:::.:::::::::: ::::.:::::::.::.::::::::.::.::::::::.:
NP_001 SVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE0 NSRNLIITVRPANQRNNVVRNSRTSGSSGQSTDNSLLGYPQQIEPSFEPEDEDSEEDDII
::.:::.::.:::::::::: :.::. : : : :: : :.. .:..
NP_001 NSHNLIVTVKPANQRNNVVR-----GASGRLTGPPSAG-PGPAEP-----DSDDDSSDLV
240 250 260 270 280
300 310 320 330 340 350
pF1KE0 IED------NGVPQQIPKAVPNTESLESLTQIELSFESGQNGFIPSNEVSLAAIASSSNT
::. ::. : :
NP_001 IENRQPPSSNGLSQGPPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGSRIRGDGSGFSL
290 300 310 320 330 340
>>XP_016878750 (OMIM: 607484) PREDICTED: partitioning de (341 aa)
initn: 979 init1: 979 opt: 1053 Z-score: 908.1 bits: 176.6 E(85289): 7.6e-44
Smith-Waterman score: 1068; 58.4% identity (80.4% similar) in 296 aa overlap (22-308:17-298)
10 20 30 40 50 60
pF1KE0 MNRSHRHGAGSGCLGTMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLV
.: ::::::.: :.. . :.:: ::. ::.::..:::.
XP_016 MARPQRTPARSPDSIVEFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLL
10 20 30 40 50
70 80 90 100 110
pF1KE0 GYADIHGDLLPINNDDNYHKAVSTANPLLRIFIQKKEEADYS--AFGTDTLIKKKNVLTN
::.: ::::::..:::. :.:.... : ::...::.: :: : ::....: ..:. :
XP_016 GYTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKRE-ADSSGLAFASNSLQRRKKGL--
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 VLRPDNH-RKKPHIVISMPQDFRPVSSIIDVDILPETHRRVRLYKYGTEKPLGFYIRDGS
.::: : .: ..::.::::: :::.::::.::::::::::.:.:...:::::::::
XP_016 LLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGM
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 SVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIA
::::.:.:::.:::::::::: ::::.:::::::.::.::::::::.::.::::::::.:
XP_016 SVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE0 NSRNLIITVRPANQRNNVVRNSRTSGSSGQSTDNSLLGYPQQIEPSFEPEDEDSEEDDII
::.:::.::.:::::::::: :.::. : : :. :: : :.. .:..
XP_016 NSHNLIVTVKPANQRNNVVR-----GASGR-----LTGPPSAGPGPAEP-DSDDDSSDLV
240 250 260 270 280
300 310 320 330 340 350
pF1KE0 IED------NGVPQQIPKAVPNTESLESLTQIELSFESGQNGFIPSNEVSLAAIASSSNT
::. ::. : :
XP_016 IENRQPPSSNGLSQGPPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGSRIRGDGSGFSL
290 300 310 320 330 340
>>XP_011521398 (OMIM: 607484) PREDICTED: partitioning de (353 aa)
initn: 1007 init1: 715 opt: 773 Z-score: 671.4 bits: 132.8 E(85289): 1.2e-30
Smith-Waterman score: 1050; 56.0% identity (77.2% similar) in 307 aa overlap (22-308:17-310)
10 20 30 40 50 60
pF1KE0 MNRSHRHGAGSGCLGTMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLV
.: ::::::.: :.. . :.:: ::. ::.::..:::.
XP_011 MARPQRTPARSPDSIVEFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLL
10 20 30 40 50
70 80 90 100
pF1KE0 GYADIHGDLLPINNDDNYHKAVSTANPLLRIFIQKKEEADYS-------------AFGTD
::.: ::::::..:::. :.:.... : ::...::. : :: ::...
XP_011 GYTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKRGEEGYSGQPLWAEADSSGLAFASN
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE0 TLIKKKNVLTNVLRPDNH-RKKPHIVISMPQDFRPVSSIIDVDILPETHRRVRLYKYGTE
.: ..:. : .::: : .: ..::.::::: :::.::::.::::::::::.:.:..
XP_011 SLQRRKKGL--LLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSD
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE0 KPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGK
.::::::::: ::::.:.:::.:::::::::: ::::.:::::::.::.::::::::.::
XP_011 RPLGFYIRDGMSVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGK
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE0 SLDQVTDMMIANSRNLIITVRPANQRNNVVRNSRTSGSSGQSTDNSLLGYPQQIEPSFEP
.::::::::.:::.:::.::.:::::::::: :.::. : : :. ::
XP_011 TLDQVTDMMVANSHNLIVTVKPANQRNNVVR-----GASGR-----LTGPPSAGPGPAEP
240 250 260 270 280
290 300 310 320 330 340
pF1KE0 EDEDSEEDDIIIED------NGVPQQIPKAVPNTESLESLTQIELSFESGQNGFIPSNEV
: :.. .:..::. ::. : :
XP_011 -DSDDDSSDLVIENRQPPSSNGLSQGPPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGS
290 300 310 320 330 340
>>XP_011521397 (OMIM: 607484) PREDICTED: partitioning de (356 aa)
initn: 1035 init1: 715 opt: 773 Z-score: 671.4 bits: 132.8 E(85289): 1.2e-30
Smith-Waterman score: 1084; 55.7% identity (75.8% similar) in 327 aa overlap (1-308:1-313)
10 20 30 40 50 60
pF1KE0 MNRSHRHGAGSGCLGTMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLV
: : .: : : . .:::::: ::::::.: :.. . :.:: ::. ::.::..:::.
XP_011 MARPQRTPARSPD-SIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLL
10 20 30 40 50
70 80 90 100
pF1KE0 GYADIHGDLLPINNDDNYHKAVSTANPLLRIFIQKKEEADYS------------AFGTDT
::.: ::::::..:::. :.:.... : ::...::. : :: ::....
XP_011 GYTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKRGEEGYSGQPLWEADSSGLAFASNS
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE0 LIKKKNVLTNVLRPDNH-RKKPHIVISMPQDFRPVSSIIDVDILPETHRRVRLYKYGTEK
: ..:. : .::: : .: ..::.::::: :::.::::.::::::::::.:.:...
XP_011 LQRRKKGL--LLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDR
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE0 PLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKS
::::::::: ::::.:.:::.:::::::::: ::::.:::::::.::.::::::::.::.
XP_011 PLGFYIRDGMSVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKT
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE0 LDQVTDMMIANSRNLIITVRPANQRNNVVRNSRTSGSSGQSTDNSLLGYPQQIEPSFEPE
::::::::.:::.:::.::.:::::::::: :.::. : : : ::
XP_011 LDQVTDMMVANSHNLIVTVKPANQRNNVVR-----GASGRLTGPPSAG-PGPAEP-----
240 250 260 270 280
290 300 310 320 330 340
pF1KE0 DEDSEEDDIIIED------NGVPQQIPKAVPNTESLESLTQIELSFESGQNGFIPSNEVS
: :.. .:..::. ::. : :
XP_011 DSDDDSSDLVIENRQPPSSNGLSQGPPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGSR
290 300 310 320 330 340
>>XP_005256034 (OMIM: 607484) PREDICTED: partitioning de (357 aa)
initn: 1035 init1: 715 opt: 773 Z-score: 671.4 bits: 132.8 E(85289): 1.2e-30
Smith-Waterman score: 1082; 55.5% identity (75.6% similar) in 328 aa overlap (1-308:1-314)
10 20 30 40 50 60
pF1KE0 MNRSHRHGAGSGCLGTMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLV
: : .: : : . .:::::: ::::::.: :.. . :.:: ::. ::.::..:::.
XP_005 MARPQRTPARSPD-SIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLL
10 20 30 40 50
70 80 90 100
pF1KE0 GYADIHGDLLPINNDDNYHKAVSTANPLLRIFIQKKEEADYS-------------AFGTD
::.: ::::::..:::. :.:.... : ::...::. : :: ::...
XP_005 GYTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKRGEEGYSGQPLWAEADSSGLAFASN
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE0 TLIKKKNVLTNVLRPDNH-RKKPHIVISMPQDFRPVSSIIDVDILPETHRRVRLYKYGTE
.: ..:. : .::: : .: ..::.::::: :::.::::.::::::::::.:.:..
XP_005 SLQRRKKGL--LLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSD
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE0 KPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGK
.::::::::: ::::.:.:::.:::::::::: ::::.:::::::.::.::::::::.::
XP_005 RPLGFYIRDGMSVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGK
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE0 SLDQVTDMMIANSRNLIITVRPANQRNNVVRNSRTSGSSGQSTDNSLLGYPQQIEPSFEP
.::::::::.:::.:::.::.:::::::::: :.::. : : : ::
XP_005 TLDQVTDMMVANSHNLIVTVKPANQRNNVVR-----GASGRLTGPPSAG-PGPAEP----
240 250 260 270 280
290 300 310 320 330 340
pF1KE0 EDEDSEEDDIIIED------NGVPQQIPKAVPNTESLESLTQIELSFESGQNGFIPSNEV
: :.. .:..::. ::. : :
XP_005 -DSDDDSSDLVIENRQPPSSNGLSQGPPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGS
290 300 310 320 330 340
372 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 20:17:37 2016 done: Sat Nov 5 20:17:38 2016
Total Scan time: 7.650 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]