FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0613, 172 aa
  1>>>pF1KE0613 172 - 172 aa - 172 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.0239+/-0.00078; mu= 8.9421+/- 0.046
 mean_var=138.7271+/-35.021, 0's: 0 Z-trim(111.5): 401  B-trim: 526 in 1/51
 Lambda= 0.108891
 statistics sampled from 11905 (12418) to 11905 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.764), E-opt: 0.2 (0.381), width:  16
 Scan time:  1.720

The best scores are:                                      opt bits E(32554)
CCDS55694.1 ZNF695 gene_id:57116|Hs108|chr1        ( 172) 1158 192.7 9.3e-50
CCDS44344.1 ZNF695 gene_id:57116|Hs108|chr1        ( 515)  878 149.3 3.3e-36


>>CCDS55694.1 ZNF695 gene_id:57116|Hs108|chr1             (172 aa)
 initn: 1158 init1: 1158 opt: 1158  Z-score: 1006.8  bits: 192.7 E(32554): 9.3e-50
Smith-Waterman score: 1158; 100.0% identity (100.0% similar) in 172 aa overlap (1-172:1-172)

               10        20        30        40        50        60
pF1KE0 MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHSLAMS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHSLAMS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 KPELIICLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQGLQVSFQKVMLRRYERCCLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KPELIICLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQGLQVSFQKVMLRRYERCCLE
               70        80        90       100       110       120

              130       140       150       160       170  
pF1KE0 KLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL
              130       140       150       160       170  

>>CCDS44344.1 ZNF695 gene_id:57116|Hs108|chr1             (515 aa)
 initn: 878 init1: 878 opt: 878  Z-score: 763.4  bits: 149.3 E(32554): 3.3e-36
Smith-Waterman score: 878; 100.0% identity (100.0% similar) in 130 aa overlap (1-130:1-130)

               10        20        30        40        50        60
pF1KE0 MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHSLAMS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHSLAMS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 KPELIICLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQGLQVSFQKVMLRRYERCCLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KPELIICLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQGLQVSFQKVMLRRYERCCLE
               70        80        90       100       110       120

              130       140       150       160       170          
pF1KE0 KLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL        
       ::::::::::                                                  
CCDS44 KLRLRNDWEIVGEWKGQKASYNGLDLCSATTHSKNFQCNKCVKGFSKFANLNKCKISHTG
              130       140       150       160       170       180




172 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  2 20:24:29 2016 done: Wed Nov  2 20:24:29 2016
 Total Scan time:  1.720 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]