Result of FASTA (ccds) for
pF1KE0570
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0570, 246 aa
1>>>pF1KE0570 246 - 246 aa - 246 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1424+/-0.000692; mu= 15.2806+/- 0.041
mean_var=66.9412+/-13.667, 0's: 0 Z-trim(109.9): 39 B-trim: 0 in 0/48
Lambda= 0.156757
statistics sampled from 11160 (11199) to 11160 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.735), E-opt: 0.2 (0.344), width: 16
Scan time: 2.200
The best scores are: opt bits E(32554)
CCDS5224.1 RAET1L gene_id:154064|Hs108|chr6 ( 246) 1701 393.1 9.2e-110
CCDS5222.1 ULBP2 gene_id:80328|Hs108|chr6 ( 246) 1593 368.7 2.1e-102
CCDS43514.1 RAET1G gene_id:353091|Hs108|chr6 ( 334) 1445 335.3 3.2e-92
CCDS5223.1 ULBP1 gene_id:80329|Hs108|chr6 ( 244) 1003 235.2 3e-62
CCDS5225.1 ULBP3 gene_id:79465|Hs108|chr6 ( 244) 823 194.5 5.4e-50
CCDS5221.1 RAET1E gene_id:135250|Hs108|chr6 ( 263) 438 107.5 9.4e-24
CCDS59042.1 RAET1E gene_id:135250|Hs108|chr6 ( 209) 433 106.3 1.7e-23
CCDS59043.1 RAET1E gene_id:135250|Hs108|chr6 ( 212) 433 106.3 1.7e-23
CCDS59044.1 RAET1E gene_id:135250|Hs108|chr6 ( 227) 337 84.6 6.2e-17
CCDS75412.1 HFE gene_id:3077|Hs108|chr6 ( 337) 253 65.7 4.5e-11
CCDS4578.1 HFE gene_id:3077|Hs108|chr6 ( 348) 253 65.7 4.6e-11
>>CCDS5224.1 RAET1L gene_id:154064|Hs108|chr6 (246 aa)
initn: 1701 init1: 1701 opt: 1701 Z-score: 2084.1 bits: 393.1 E(32554): 9.2e-110
Smith-Waterman score: 1701; 100.0% identity (100.0% similar) in 246 aa overlap (1-246:1-246)
10 20 30 40 50 60
pF1KE0 MAAAAIPALLLCLPLLFLLFGWSRARRDDPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 MAAAAIPALLLCLPLLFLLFGWSRARRDDPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FLHYDCGNKTVTPVSPLGKKLNVTMAWKAQNPVLREVVDILTEQLLDIQLENYTPKEPLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 FLHYDCGNKTVTPVSPLGKKLNVTMAWKAQNPVLREVVDILTEQLLDIQLENYTPKEPLT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LQARMSCEQKAEGHSSGSWQFSIDGQTFLLFDSEKRMWTTVHPGARKMKEKWENDKDVAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 LQARMSCEQKAEGHSSGSWQFSIDGQTFLLFDSEKRMWTTVHPGARKMKEKWENDKDVAM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 SFHYISMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 SFHYISMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILPC
190 200 210 220 230 240
pF1KE0 FILPGI
::::::
CCDS52 FILPGI
>>CCDS5222.1 ULBP2 gene_id:80328|Hs108|chr6 (246 aa)
initn: 1593 init1: 1593 opt: 1593 Z-score: 1952.1 bits: 368.7 E(32554): 2.1e-102
Smith-Waterman score: 1593; 94.3% identity (95.9% similar) in 246 aa overlap (1-246:1-246)
10 20 30 40 50 60
pF1KE0 MAAAAIPALLLCLPLLFLLFGWSRARRDDPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT
::::: .:::::::.:: ::::: : ::::::::::::::::::::::::::::::::
CCDS52 MAAAAATKILLCLPLLLLLSGWSRAGRADPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FLHYDCGNKTVTPVSPLGKKLNVTMAWKAQNPVLREVVDILTEQLLDIQLENYTPKEPLT
:::::::::::::::::::::::: :::::::::::::::::::: ::::::::::::::
CCDS52 FLHYDCGNKTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQLENYTPKEPLT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LQARMSCEQKAEGHSSGSWQFSIDGQTFLLFDSEKRMWTTVHPGARKMKEKWENDKDVAM
::::::::::::::::::::::.::: ::::::::::::::::::::::::::::: :::
CCDS52 LQARMSCEQKAEGHSSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVAM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 SFHYISMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILPC
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 SFHYFSMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILPC
190 200 210 220 230 240
pF1KE0 FILPGI
::::::
CCDS52 FILPGI
>>CCDS43514.1 RAET1G gene_id:353091|Hs108|chr6 (334 aa)
initn: 1463 init1: 1441 opt: 1445 Z-score: 1769.2 bits: 335.3 E(32554): 3.2e-92
Smith-Waterman score: 1445; 86.8% identity (93.8% similar) in 243 aa overlap (1-243:1-241)
10 20 30 40 50 60
pF1KE0 MAAAAIPALLLCLPLLFLLFGWSRARRDDPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT
::::: ::.:: ::::.:: .: :. ::::::::::::::::::::::::::::::::
CCDS43 MAAAASPAFLLRLPLLLLLSSWCRTGLADPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FLHYDCGNKTVTPVSPLGKKLNVTMAWKAQNPVLREVVDILTEQLLDIQLENYTPKEPLT
:::::::.:::::::::::::::: :::::::::::::::::::::::::::: ::::::
CCDS43 FLHYDCGSKTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLLDIQLENYIPKEPLT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LQARMSCEQKAEGHSSGSWQFSIDGQTFLLFDSEKRMWTTVHPGARKMKEKWENDKDVAM
::::::::::::::.:::::.:.::: :::::::.::::::::::::::::::::::..:
CCDS43 LQARMSCEQKAEGHGSGSWQLSFDGQIFLLFDSENRMWTTVHPGARKMKEKWENDKDMTM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 SFHYISMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILPC
:::::::::: ::::::::::::::::::::: .:::::.: ::::::::::::::. :
CCDS43 SFHYISMGDCTGWLEDFLMGMDSTLEPSAGAPPTMSSGTAQPRATATTLILCCLLIM--C
190 200 210 220 230
pF1KE0 FILPGI
...
CCDS43 LLICSRHSLTQSHGHHPQSLQPPPHPPLLHPTWLLRRVLWSDSYQIAKRPLSGGHVTRVT
240 250 260 270 280 290
>>CCDS5223.1 ULBP1 gene_id:80329|Hs108|chr6 (244 aa)
initn: 1027 init1: 927 opt: 1003 Z-score: 1231.0 bits: 235.2 E(32554): 3e-62
Smith-Waterman score: 1003; 60.4% identity (78.0% similar) in 245 aa overlap (1-245:1-243)
10 20 30 40 50 60
pF1KE0 MAAAAIPALLLCLPLLFLLFGWSRARRDDPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT
::::: ::.::::::: :: ::::: : : ::::. . :: :: :.:: ::: :::.
CCDS52 MAAAASPAFLLCLPLLHLLSGWSRAGWVDTHCLCYDFIITPKSRPEPQWCEVQGLVDERP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FLHYDCGNKTVTPVSPLGKKLNVTMAWKAQNPVLREVVDILTEQLLDIQLENYTPKEPLT
:::::: :. . . ::::.::: .:. :. .::.:::.: ::::::.:: : ::::
CCDS52 FLHYDCVNHKAKAFASLGKKVNVTKTWEEQTETLRDVVDFLKGQLLDIQVENLIPIEPLT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LQARMSCEQKAEGHSSGSWQFSIDGQTFLLFDSEKRMWTTVHPGARKMKEKWENDKDVAM
::::::::..:.::. ::::: ..:: ::::::..: ::..::::.:: ::::...::.:
CCDS52 LQARMSCEHEAHGHGRGSWQFLFNGQKFLLFDSNNRKWTALHPGAKKMTEKWEKNRDVTM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 SFHYISMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILPC
:. ::.::: :::.::: .. :.:. : ... :::: .: :::: ::::. :
CCDS52 FFQKISLGDCKMWLEEFLMYWEQMLDPT--KPPSLAPGTTQPKAMATTLSPWSLLIIFLC
190 200 210 220 230
pF1KE0 FILPGI
::: :
CCDS52 FILAGR
240
>>CCDS5225.1 ULBP3 gene_id:79465|Hs108|chr6 (244 aa)
initn: 753 init1: 707 opt: 823 Z-score: 1011.0 bits: 194.5 E(32554): 5.4e-50
Smith-Waterman score: 823; 53.8% identity (74.1% similar) in 247 aa overlap (1-246:1-244)
10 20 30 40 50
pF1KE0 MAAAAIPALLLCLPLL-FLLFGWSRARRDDPHSLCYDITVIPKFRPGPRWCAVQGQVDEK
::::: ::.: : .: .::: :: . : : ::: :..:.: : : .:: ::.:::.:
CCDS52 MAAAASPAILPRLAILPYLLFDWSGTGRADAHSLWYNFTIIHLPRHGQQWCEVQSQVDQK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 TFLHYDCGNKTVTPVSPLGKKLNVTMAWKAQNPVLREVVDILTEQLLDIQLENYTPKEPL
.:: ::::. : .. : ..: .: :: : .:::: . : .: : .::..::. ::
CCDS52 NFLSYDCGSDKVLSMGHLEEQLYATDAWGKQLEMLREVGQRLRLELADTELEDFTPSGPL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 TLQARMSCEQKAEGHSSGSWQFSIDGQTFLLFDSEKRMWTTVHPGARKMKEKWENDKDVA
:::.::::: .:.:. ::::::.::. ::::::..: ::.:: :::.::::::.:. ..
CCDS52 TLQVRMSCECEADGYIRGSWQFSFDGRKFLLFDSNNRKWTVVHAGARRMKEKWEKDSGLT
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 MSFHYISMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILP
:...:: :: .::.:::: . :::.: : .:. : .: .: :::: .::::
CCDS52 TFFKMVSMRDCKSWLRDFLMHRKKRLEPTA--PPTMAPGLAQPKAIATTLSPWSFLIIL-
190 200 210 220 230
240
pF1KE0 CFILPGI
:::::::
CCDS52 CFILPGI
240
>>CCDS5221.1 RAET1E gene_id:135250|Hs108|chr6 (263 aa)
initn: 433 init1: 263 opt: 438 Z-score: 540.0 bits: 107.5 E(32554): 9.4e-24
Smith-Waterman score: 438; 34.3% identity (63.4% similar) in 216 aa overlap (31-240:31-245)
10 20 30 40 50 60
pF1KE0 MAAAAIPALLLCLPLLFLLFGWSRARRDDPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT
::::...:. ::: :: .: ....
CCDS52 MRRISLTSSPVRLLLFLLLLLIALEIMVGGHSLCFNFTIKSLSRPGQPWCEAQVFLNKNL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FLHYDCGNKTVTPVSPLGKKLNVTMAWKAQNPVLREVVDILTEQLLDIQLENYTPKEPLT
::.:. :. : :.. ::::. .: .: . .: :: : : ::. . : ..: :
CCDS52 FLQYNSDNNMVKPLGLLGKKVYATSTWGELTQTLGEVGRDLRMLLCDIKPQIKT-SDPST
70 80 90 100 110
130 140 150 160 170 180
pF1KE0 LQARMSCEQKAEGHSSGSWQFSIDGQTFLLFDSEKRMWTTVHPGARKMKEKWENDKDVAM
::..: :...:: ...::::. .:. ::::. . ::... : :.:: :..:. .
CCDS52 LQVEMFCQREAERCTGASWQFATNGEKSLLFDAMNMTWTVINHEASKIKETWKKDRGLEK
120 130 140 150 160 170
190 200 210 220 230
pF1KE0 SFHYISMGDCIGWLEDFLMGMDSTLEPSAG----APLAMSSGTTQLR--ATATTLILCCL
:. .: ::: ::..:: .. ::... . . ::.. : .. ..: .
CCDS52 YFRKLSKGDCDHWLREFLGHWEAMPEPTVSPVNASDIHWSSSSLPDRWIILGAFILLVLM
180 190 200 210 220 230
240
pF1KE0 LIILPCFILPGI
:.: :
CCDS52 GIVLICVWWQNGEWQAGLWPLRTS
240 250 260
>>CCDS59042.1 RAET1E gene_id:135250|Hs108|chr6 (209 aa)
initn: 433 init1: 263 opt: 433 Z-score: 535.3 bits: 106.3 E(32554): 1.7e-23
Smith-Waterman score: 433; 37.6% identity (66.3% similar) in 178 aa overlap (31-208:31-207)
10 20 30 40 50 60
pF1KE0 MAAAAIPALLLCLPLLFLLFGWSRARRDDPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT
::::...:. ::: :: .: ....
CCDS59 MRRISLTSSPVRLLLFLLLLLIALEIMVGGHSLCFNFTIKSLSRPGQPWCEAQVFLNKNL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FLHYDCGNKTVTPVSPLGKKLNVTMAWKAQNPVLREVVDILTEQLLDIQLENYTPKEPLT
::.:. :. : :.. ::::. .: .: . .: :: : : ::. . : ..: :
CCDS59 FLQYNSDNNMVKPLGLLGKKVYATSTWGELTQTLGEVGRDLRMLLCDIKPQIKT-SDPST
70 80 90 100 110
130 140 150 160 170 180
pF1KE0 LQARMSCEQKAEGHSSGSWQFSIDGQTFLLFDSEKRMWTTVHPGARKMKEKWENDKDVAM
::..: :...:: ...::::. .:. ::::. . ::... : :.:: :..:. .
CCDS59 LQVEMFCQREAERCTGASWQFATNGEKSLLFDAMNMTWTVINHEASKIKETWKKDRGLEK
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE0 SFHYISMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILPC
:. .: ::: ::..:: .. ::.
CCDS59 YFRKLSKGDCDHWLREFLGHWEAMPEPTGN
180 190 200
>>CCDS59043.1 RAET1E gene_id:135250|Hs108|chr6 (212 aa)
initn: 433 init1: 263 opt: 433 Z-score: 535.2 bits: 106.3 E(32554): 1.7e-23
Smith-Waterman score: 433; 37.6% identity (66.3% similar) in 178 aa overlap (31-208:31-207)
10 20 30 40 50 60
pF1KE0 MAAAAIPALLLCLPLLFLLFGWSRARRDDPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT
::::...:. ::: :: .: ....
CCDS59 MRRISLTSSPVRLLLFLLLLLIALEIMVGGHSLCFNFTIKSLSRPGQPWCEAQVFLNKNL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FLHYDCGNKTVTPVSPLGKKLNVTMAWKAQNPVLREVVDILTEQLLDIQLENYTPKEPLT
::.:. :. : :.. ::::. .: .: . .: :: : : ::. . : ..: :
CCDS59 FLQYNSDNNMVKPLGLLGKKVYATSTWGELTQTLGEVGRDLRMLLCDIKPQIKT-SDPST
70 80 90 100 110
130 140 150 160 170 180
pF1KE0 LQARMSCEQKAEGHSSGSWQFSIDGQTFLLFDSEKRMWTTVHPGARKMKEKWENDKDVAM
::..: :...:: ...::::. .:. ::::. . ::... : :.:: :..:. .
CCDS59 LQVEMFCQREAERCTGASWQFATNGEKSLLFDAMNMTWTVINHEASKIKETWKKDRGLEK
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE0 SFHYISMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILPC
:. .: ::: ::..:: .. ::.
CCDS59 YFRKLSKGDCDHWLREFLGHWEAMPEPTGRRST
180 190 200 210
>>CCDS59044.1 RAET1E gene_id:135250|Hs108|chr6 (227 aa)
initn: 322 init1: 263 opt: 337 Z-score: 417.4 bits: 84.6 E(32554): 6.2e-17
Smith-Waterman score: 337; 33.0% identity (62.2% similar) in 185 aa overlap (62-240:26-209)
40 50 60 70 80 90
pF1KE0 SLCYDITVIPKFRPGPRWCAVQGQVDEKTFLHYDCGNKTVTPVSPLGKKLNVTMAWKAQN
. :. :. : :.. ::::. .: .: .
CCDS59 MRRISLTSSPVRLLLFLLLLLIALEIMYNSDNNMVKPLGLLGKKVYATSTWGELT
10 20 30 40 50
100 110 120 130 140 150
pF1KE0 PVLREVVDILTEQLLDIQLENYTPKEPLTLQARMSCEQKAEGHSSGSWQFSIDGQTFLLF
.: :: : : ::. . : ..: :::..: :...:: ...::::. .:. :::
CCDS59 QTLGEVGRDLRMLLCDIKPQIKT-SDPSTLQVEMFCQREAERCTGASWQFATNGEKSLLF
60 70 80 90 100 110
160 170 180 190 200 210
pF1KE0 DSEKRMWTTVHPGARKMKEKWENDKDVAMSFHYISMGDCIGWLEDFLMGMDSTLEPSAG-
:. . ::... : :.:: :..:. . :. .: ::: ::..:: .. ::...
CCDS59 DAMNMTWTVINHEASKIKETWKKDRGLEKYFRKLSKGDCDHWLREFLGHWEAMPEPTVSP
120 130 140 150 160 170
220 230 240
pF1KE0 ---APLAMSSGTTQLR--ATATTLILCCLLIILPCFILPGI
. . ::.. : .. ..: . :.: :
CCDS59 VNASDIHWSSSSLPDRWIILGAFILLVLMGIVLICVWWQNGEWQAGLWPLRTS
180 190 200 210 220
>>CCDS75412.1 HFE gene_id:3077|Hs108|chr6 (337 aa)
initn: 255 init1: 213 opt: 253 Z-score: 312.3 bits: 65.7 E(32554): 4.5e-11
Smith-Waterman score: 253; 27.7% identity (53.7% similar) in 231 aa overlap (1-226:1-227)
10 20 30 40 50 60
pF1KE0 MAAAAIPALLLCLPLLFLLFGWSRARRDDPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT
:. : ::::: :..: . ..: ::: : . . : . : ::..
CCDS75 MGPRARPALLL---LMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQL
10 20 30 40 50
70 80 90 100 110
pF1KE0 FLHYDCGNKTVTPVSPLGKKLNVTMAWKAQNPVLREVVDILTEQLLDIQLENYT-PKEPL
:. :: .. : : .: .. .. : . :. ..: .. : .::.. ::
CCDS75 FVFYDHESRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTI-MENHNHSKESH
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 TLQARMSCEQKAEGHSSGSWQFSIDGQTFLLFDSEKRMWTTVHPGARKMKEKWENDKDVA
:::. ..::.. .. . : :... ::: : : . : ...: : : .:: : :
CCDS75 TLQVILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRA
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 MSFHYISMGDCIGWLEDFL-MG---MDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLL
. . :: . :...: .: .:. . : . . ..:..: :: :
CCDS75 RQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTHHVTSSVTTLRCRALNYYPQNIT
180 190 200 210 220 230
240
pF1KE0 IILPCFILPGI
CCDS75 MKWLKDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVI
240 250 260 270 280 290
246 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 22:47:37 2016 done: Wed Nov 2 22:47:37 2016
Total Scan time: 2.200 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]