Result of FASTA (omim) for
pF1KE0543
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0543, 315 aa
1>>>pF1KE0543 315 - 315 aa - 315 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.3978+/-0.000398; mu= 21.0203+/- 0.025
mean_var=62.8292+/-13.018, 0's: 0 Z-trim(110.7): 259 B-trim: 51 in 1/50
Lambda= 0.161806
statistics sampled from 18895 (19172) to 18895 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.595), E-opt: 0.2 (0.225), width: 16
Scan time: 6.070
The best scores are: opt bits E(85289)
XP_016884457 (OMIM: 609303) PREDICTED: mitochondri ( 315) 2078 493.9 1.8e-139
NP_001290413 (OMIM: 609303) mitochondrial glutamat ( 315) 2078 493.9 1.8e-139
NP_113669 (OMIM: 609303) mitochondrial glutamate c ( 315) 2078 493.9 1.8e-139
XP_011544453 (OMIM: 609303) PREDICTED: mitochondri ( 315) 2078 493.9 1.8e-139
XP_011544455 (OMIM: 609303) PREDICTED: mitochondri ( 315) 2078 493.9 1.8e-139
XP_011544456 (OMIM: 609303) PREDICTED: mitochondri ( 315) 2078 493.9 1.8e-139
XP_011544454 (OMIM: 609303) PREDICTED: mitochondri ( 315) 2078 493.9 1.8e-139
XP_011544452 (OMIM: 609303) PREDICTED: mitochondri ( 366) 2078 493.9 2e-139
XP_011544451 (OMIM: 609303) PREDICTED: mitochondri ( 410) 2078 494.0 2.2e-139
XP_016884463 (OMIM: 609303) PREDICTED: mitochondri ( 272) 1799 428.7 6.7e-120
XP_016884460 (OMIM: 609303) PREDICTED: mitochondri ( 272) 1799 428.7 6.7e-120
XP_016884464 (OMIM: 609303) PREDICTED: mitochondri ( 272) 1799 428.7 6.7e-120
XP_016884462 (OMIM: 609303) PREDICTED: mitochondri ( 272) 1799 428.7 6.7e-120
XP_016884461 (OMIM: 609303) PREDICTED: mitochondri ( 272) 1799 428.7 6.7e-120
XP_016884458 (OMIM: 609303) PREDICTED: mitochondri ( 272) 1799 428.7 6.7e-120
XP_016884459 (OMIM: 609303) PREDICTED: mitochondri ( 272) 1799 428.7 6.7e-120
NP_001177989 (OMIM: 609302,609304) mitochondrial g ( 323) 1347 323.2 4.4e-88
NP_078974 (OMIM: 609302,609304) mitochondrial glut ( 323) 1347 323.2 4.4e-88
NP_001177990 (OMIM: 609302,609304) mitochondrial g ( 323) 1347 323.2 4.4e-88
XP_011518673 (OMIM: 609302,609304) PREDICTED: mito ( 323) 1347 323.2 4.4e-88
XP_011518672 (OMIM: 609302,609304) PREDICTED: mito ( 323) 1347 323.2 4.4e-88
XP_011518671 (OMIM: 609302,609304) PREDICTED: mito ( 323) 1347 323.2 4.4e-88
XP_016867153 (OMIM: 603471,603859,605814) PREDICTE ( 391) 391 100.1 7.5e-21
XP_016867154 (OMIM: 603471,603859,605814) PREDICTE ( 391) 391 100.1 7.5e-21
XP_016867152 (OMIM: 603471,603859,605814) PREDICTE ( 672) 391 100.4 1.1e-20
NP_055066 (OMIM: 603471,603859,605814) calcium-bin ( 675) 391 100.4 1.1e-20
NP_001153682 (OMIM: 603471,603859,605814) calcium- ( 676) 391 100.4 1.1e-20
XP_006715894 (OMIM: 603471,603859,605814) PREDICTE ( 686) 391 100.4 1.1e-20
XP_011510372 (OMIM: 603667,612949) PREDICTED: calc ( 587) 386 99.1 2.3e-20
NP_003696 (OMIM: 603667,612949) calcium-binding mi ( 678) 386 99.2 2.5e-20
XP_016864577 (OMIM: 616150) PREDICTED: solute carr ( 311) 358 92.3 1.3e-18
XP_016864576 (OMIM: 616150) PREDICTED: solute carr ( 311) 358 92.3 1.3e-18
XP_016864575 (OMIM: 616150) PREDICTED: solute carr ( 311) 358 92.3 1.3e-18
XP_006714609 (OMIM: 616150) PREDICTED: solute carr ( 311) 358 92.3 1.3e-18
NP_997000 (OMIM: 609911) solute carrier family 25 ( 308) 345 89.3 1.1e-17
XP_006714613 (OMIM: 616150) PREDICTED: solute carr ( 276) 339 87.9 2.7e-17
NP_001269126 (OMIM: 300242) brain mitochondrial ca ( 353) 339 88.0 3.2e-17
XP_011514029 (OMIM: 603471,603859,605814) PREDICTE ( 456) 311 81.5 3.5e-15
XP_016864579 (OMIM: 616150) PREDICTED: solute carr ( 257) 285 75.2 1.6e-13
XP_011508482 (OMIM: 610824) PREDICTED: solute carr ( 322) 267 71.1 3.4e-12
XP_011508483 (OMIM: 610824) PREDICTED: solute carr ( 322) 267 71.1 3.4e-12
NP_001273113 (OMIM: 610824) solute carrier family ( 322) 267 71.1 3.4e-12
XP_006711720 (OMIM: 610824) PREDICTED: solute carr ( 322) 267 71.1 3.4e-12
XP_011541501 (OMIM: 616150) PREDICTED: solute carr ( 271) 243 65.4 1.5e-10
XP_005271960 (OMIM: 616150) PREDICTED: solute carr ( 274) 243 65.4 1.5e-10
XP_011541498 (OMIM: 616150) PREDICTED: solute carr ( 275) 243 65.4 1.5e-10
XP_016864578 (OMIM: 616150) PREDICTED: solute carr ( 279) 243 65.4 1.5e-10
XP_006714607 (OMIM: 616150) PREDICTED: solute carr ( 320) 243 65.5 1.6e-10
NP_005975 (OMIM: 190315,615182) tricarboxylate tra ( 311) 240 64.8 2.6e-10
NP_001243463 (OMIM: 190315,615182) tricarboxylate ( 318) 235 63.6 6e-10
>>XP_016884457 (OMIM: 609303) PREDICTED: mitochondrial g (315 aa)
initn: 2078 init1: 2078 opt: 2078 Z-score: 2624.8 bits: 493.9 E(85289): 1.8e-139
Smith-Waterman score: 2078; 100.0% identity (100.0% similar) in 315 aa overlap (1-315:1-315)
10 20 30 40 50 60
pF1KE0 MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHGKAMYKGMIDCLMKTARAEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHGKAMYKGMIDCLMKTARAEG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 CPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 PLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQG
250 260 270 280 290 300
310
pF1KE0 VYFIGIGERILKCFD
:::::::::::::::
XP_016 VYFIGIGERILKCFD
310
>>NP_001290413 (OMIM: 609303) mitochondrial glutamate ca (315 aa)
initn: 2078 init1: 2078 opt: 2078 Z-score: 2624.8 bits: 493.9 E(85289): 1.8e-139
Smith-Waterman score: 2078; 100.0% identity (100.0% similar) in 315 aa overlap (1-315:1-315)
10 20 30 40 50 60
pF1KE0 MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHGKAMYKGMIDCLMKTARAEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHGKAMYKGMIDCLMKTARAEG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 CPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 PLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQG
250 260 270 280 290 300
310
pF1KE0 VYFIGIGERILKCFD
:::::::::::::::
NP_001 VYFIGIGERILKCFD
310
>>NP_113669 (OMIM: 609303) mitochondrial glutamate carri (315 aa)
initn: 2078 init1: 2078 opt: 2078 Z-score: 2624.8 bits: 493.9 E(85289): 1.8e-139
Smith-Waterman score: 2078; 100.0% identity (100.0% similar) in 315 aa overlap (1-315:1-315)
10 20 30 40 50 60
pF1KE0 MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHGKAMYKGMIDCLMKTARAEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHGKAMYKGMIDCLMKTARAEG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 FFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 CPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 CPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 GLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 PLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 PLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQG
250 260 270 280 290 300
310
pF1KE0 VYFIGIGERILKCFD
:::::::::::::::
NP_113 VYFIGIGERILKCFD
310
>>XP_011544453 (OMIM: 609303) PREDICTED: mitochondrial g (315 aa)
initn: 2078 init1: 2078 opt: 2078 Z-score: 2624.8 bits: 493.9 E(85289): 1.8e-139
Smith-Waterman score: 2078; 100.0% identity (100.0% similar) in 315 aa overlap (1-315:1-315)
10 20 30 40 50 60
pF1KE0 MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHGKAMYKGMIDCLMKTARAEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHGKAMYKGMIDCLMKTARAEG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 CPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 PLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQG
250 260 270 280 290 300
310
pF1KE0 VYFIGIGERILKCFD
:::::::::::::::
XP_011 VYFIGIGERILKCFD
310
>>XP_011544455 (OMIM: 609303) PREDICTED: mitochondrial g (315 aa)
initn: 2078 init1: 2078 opt: 2078 Z-score: 2624.8 bits: 493.9 E(85289): 1.8e-139
Smith-Waterman score: 2078; 100.0% identity (100.0% similar) in 315 aa overlap (1-315:1-315)
10 20 30 40 50 60
pF1KE0 MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHGKAMYKGMIDCLMKTARAEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHGKAMYKGMIDCLMKTARAEG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 CPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 PLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQG
250 260 270 280 290 300
310
pF1KE0 VYFIGIGERILKCFD
:::::::::::::::
XP_011 VYFIGIGERILKCFD
310
>>XP_011544456 (OMIM: 609303) PREDICTED: mitochondrial g (315 aa)
initn: 2078 init1: 2078 opt: 2078 Z-score: 2624.8 bits: 493.9 E(85289): 1.8e-139
Smith-Waterman score: 2078; 100.0% identity (100.0% similar) in 315 aa overlap (1-315:1-315)
10 20 30 40 50 60
pF1KE0 MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHGKAMYKGMIDCLMKTARAEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHGKAMYKGMIDCLMKTARAEG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 CPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 PLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQG
250 260 270 280 290 300
310
pF1KE0 VYFIGIGERILKCFD
:::::::::::::::
XP_011 VYFIGIGERILKCFD
310
>>XP_011544454 (OMIM: 609303) PREDICTED: mitochondrial g (315 aa)
initn: 2078 init1: 2078 opt: 2078 Z-score: 2624.8 bits: 493.9 E(85289): 1.8e-139
Smith-Waterman score: 2078; 100.0% identity (100.0% similar) in 315 aa overlap (1-315:1-315)
10 20 30 40 50 60
pF1KE0 MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHGKAMYKGMIDCLMKTARAEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHGKAMYKGMIDCLMKTARAEG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 CPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 PLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQG
250 260 270 280 290 300
310
pF1KE0 VYFIGIGERILKCFD
:::::::::::::::
XP_011 VYFIGIGERILKCFD
310
>>XP_011544452 (OMIM: 609303) PREDICTED: mitochondrial g (366 aa)
initn: 2078 init1: 2078 opt: 2078 Z-score: 2624.0 bits: 493.9 E(85289): 2e-139
Smith-Waterman score: 2078; 100.0% identity (100.0% similar) in 315 aa overlap (1-315:52-366)
10 20 30
pF1KE0 MTHQDLSITAKLINGGVAGLVGVTCVFPID
::::::::::::::::::::::::::::::
XP_011 QRFLPKADSPNSGYPKEPAALCPGIPSPCRMTHQDLSITAKLINGGVAGLVGVTCVFPID
30 40 50 60 70 80
40 50 60 70 80 90
pF1KE0 LAKTRLQNQHGKAMYKGMIDCLMKTARAEGFFGMYRGAAVNLTLVTPEKAIKLAANDFFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAKTRLQNQHGKAMYKGMIDCLMKTARAEGFFGMYRGAAVNLTLVTPEKAIKLAANDFFR
90 100 110 120 130 140
100 110 120 130 140 150
pF1KE0 RLLMEDGMQRNLKMEMLAGCGAGMCQVVVTCPMEMLKIQLQDAGRLAVHHQGSASAPSTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLLMEDGMQRNLKMEMLAGCGAGMCQVVVTCPMEMLKIQLQDAGRLAVHHQGSASAPSTS
150 160 170 180 190 200
160 170 180 190 200 210
pF1KE0 RSYTTGSASTHRRPSATLIAWELLRTQGLAGLYRGLGATLLRDIPFSIIYFPLFANLNNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSYTTGSASTHRRPSATLIAWELLRTQGLAGLYRGLGATLLRDIPFSIIYFPLFANLNNL
210 220 230 240 250 260
220 230 240 250 260 270
pF1KE0 GFNELAGKASFAHSFVSGCVAGSIAAVAVTPLDVLKTRIQTLKKGLGEDMYSGITDCARK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GFNELAGKASFAHSFVSGCVAGSIAAVAVTPLDVLKTRIQTLKKGLGEDMYSGITDCARK
270 280 290 300 310 320
280 290 300 310
pF1KE0 LWIQEGPSAFMKGAGCRALVIAPLFGIAQGVYFIGIGERILKCFD
:::::::::::::::::::::::::::::::::::::::::::::
XP_011 LWIQEGPSAFMKGAGCRALVIAPLFGIAQGVYFIGIGERILKCFD
330 340 350 360
>>XP_011544451 (OMIM: 609303) PREDICTED: mitochondrial g (410 aa)
initn: 2078 init1: 2078 opt: 2078 Z-score: 2623.3 bits: 494.0 E(85289): 2.2e-139
Smith-Waterman score: 2078; 100.0% identity (100.0% similar) in 315 aa overlap (1-315:96-410)
10 20 30
pF1KE0 MTHQDLSITAKLINGGVAGLVGVTCVFPID
::::::::::::::::::::::::::::::
XP_011 KLPLLPPDSPNSGYPKEPAALCPGIPSPCRMTHQDLSITAKLINGGVAGLVGVTCVFPID
70 80 90 100 110 120
40 50 60 70 80 90
pF1KE0 LAKTRLQNQHGKAMYKGMIDCLMKTARAEGFFGMYRGAAVNLTLVTPEKAIKLAANDFFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAKTRLQNQHGKAMYKGMIDCLMKTARAEGFFGMYRGAAVNLTLVTPEKAIKLAANDFFR
130 140 150 160 170 180
100 110 120 130 140 150
pF1KE0 RLLMEDGMQRNLKMEMLAGCGAGMCQVVVTCPMEMLKIQLQDAGRLAVHHQGSASAPSTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLLMEDGMQRNLKMEMLAGCGAGMCQVVVTCPMEMLKIQLQDAGRLAVHHQGSASAPSTS
190 200 210 220 230 240
160 170 180 190 200 210
pF1KE0 RSYTTGSASTHRRPSATLIAWELLRTQGLAGLYRGLGATLLRDIPFSIIYFPLFANLNNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSYTTGSASTHRRPSATLIAWELLRTQGLAGLYRGLGATLLRDIPFSIIYFPLFANLNNL
250 260 270 280 290 300
220 230 240 250 260 270
pF1KE0 GFNELAGKASFAHSFVSGCVAGSIAAVAVTPLDVLKTRIQTLKKGLGEDMYSGITDCARK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GFNELAGKASFAHSFVSGCVAGSIAAVAVTPLDVLKTRIQTLKKGLGEDMYSGITDCARK
310 320 330 340 350 360
280 290 300 310
pF1KE0 LWIQEGPSAFMKGAGCRALVIAPLFGIAQGVYFIGIGERILKCFD
:::::::::::::::::::::::::::::::::::::::::::::
XP_011 LWIQEGPSAFMKGAGCRALVIAPLFGIAQGVYFIGIGERILKCFD
370 380 390 400 410
>>XP_016884463 (OMIM: 609303) PREDICTED: mitochondrial g (272 aa)
initn: 1799 init1: 1799 opt: 1799 Z-score: 2273.6 bits: 428.7 E(85289): 6.7e-120
Smith-Waterman score: 1799; 100.0% identity (100.0% similar) in 272 aa overlap (44-315:1-272)
20 30 40 50 60 70
pF1KE0 NGGVAGLVGVTCVFPIDLAKTRLQNQHGKAMYKGMIDCLMKTARAEGFFGMYRGAAVNLT
::::::::::::::::::::::::::::::
XP_016 MYKGMIDCLMKTARAEGFFGMYRGAAVNLT
10 20 30
80 90 100 110 120 130
pF1KE0 LVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVVTCPMEMLKIQLQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVVTCPMEMLKIQLQDA
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE0 GRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLAGLYRGLGATLLRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLAGLYRGLGATLLRD
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE0 IPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVTPLDVLKTRIQTLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVTPLDVLKTRIQTLK
160 170 180 190 200 210
260 270 280 290 300 310
pF1KE0 KGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQGVYFIGIGERILKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQGVYFIGIGERILKC
220 230 240 250 260 270
pF1KE0 FD
::
XP_016 FD
315 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 00:09:32 2016 done: Thu Nov 3 00:09:33 2016
Total Scan time: 6.070 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]