Result of FASTA (ccds) for
pF1KE0538
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0538, 229 aa
1>>>pF1KE0538 229 - 229 aa - 229 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6844+/-0.000988; mu= 12.5682+/- 0.061
mean_var=81.2539+/-16.384, 0's: 0 Z-trim(105.6): 179 B-trim: 253 in 1/48
Lambda= 0.142283
statistics sampled from 8284 (8489) to 8284 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.633), E-opt: 0.2 (0.261), width: 16
Scan time: 2.060
The best scores are: opt bits E(32554)
CCDS77454.1 RABL2A gene_id:11159|Hs108|chr2 ( 229) 1507 318.9 1.7e-87
CCDS33683.1 RABL2B gene_id:11158|Hs108|chr22 ( 229) 1498 317.0 6.3e-87
CCDS2118.1 RABL2A gene_id:11159|Hs108|chr2 ( 228) 1490 315.4 2e-86
CCDS14102.1 RABL2B gene_id:11158|Hs108|chr22 ( 228) 1481 313.5 7e-86
CCDS77455.1 RABL2A gene_id:11159|Hs108|chr2 ( 238) 1112 237.8 4.6e-63
CCDS46738.1 RABL2B gene_id:11158|Hs108|chr22 ( 238) 1108 237.0 8.1e-63
CCDS77456.1 RABL2A gene_id:11159|Hs108|chr2 ( 165) 590 130.5 6.2e-31
CCDS14156.1 RAB9A gene_id:9367|Hs108|chrX ( 201) 347 80.7 7.5e-16
CCDS14515.1 RAB9B gene_id:51209|Hs108|chrX ( 201) 343 79.9 1.3e-15
CCDS76691.1 RAB15 gene_id:376267|Hs108|chr14 ( 212) 334 78.1 5e-15
CCDS12201.1 RAB11B gene_id:9230|Hs108|chr19 ( 218) 334 78.1 5.1e-15
CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12 ( 201) 331 77.4 7.3e-15
CCDS7155.1 RAB18 gene_id:22931|Hs108|chr10 ( 206) 331 77.4 7.5e-15
CCDS10212.1 RAB11A gene_id:8766|Hs108|chr15 ( 216) 331 77.5 7.8e-15
CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11 ( 201) 330 77.2 8.4e-15
CCDS8264.1 RAB30 gene_id:27314|Hs108|chr11 ( 203) 330 77.2 8.5e-15
CCDS3052.1 RAB7A gene_id:7879|Hs108|chr3 ( 207) 328 76.8 1.1e-14
CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2 ( 205) 323 75.8 2.3e-14
CCDS11703.1 RAB37 gene_id:326624|Hs108|chr17 ( 216) 323 75.8 2.4e-14
CCDS10460.1 RAB26 gene_id:25837|Hs108|chr16 ( 256) 323 75.9 2.8e-14
CCDS42410.1 RAB12 gene_id:201475|Hs108|chr18 ( 244) 319 75.0 4.7e-14
CCDS76806.1 RAB26 gene_id:25837|Hs108|chr16 ( 190) 308 72.7 1.8e-13
CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9 ( 215) 308 72.7 2e-13
CCDS3747.1 RAB33B gene_id:83452|Hs108|chr4 ( 229) 308 72.8 2.1e-13
CCDS14621.1 RAB33A gene_id:9363|Hs108|chrX ( 237) 303 71.7 4.5e-13
CCDS9271.1 RAN gene_id:5901|Hs108|chr12 ( 216) 298 70.7 8.5e-13
CCDS58373.1 RAB11A gene_id:8766|Hs108|chr15 ( 155) 296 70.2 8.6e-13
CCDS54161.1 RAB37 gene_id:326624|Hs108|chr17 ( 228) 298 70.7 8.9e-13
CCDS8900.1 RAB5B gene_id:5869|Hs108|chr12 ( 215) 296 70.3 1.1e-12
CCDS8223.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 294 69.9 1.5e-12
CCDS82198.1 RAB37 gene_id:326624|Hs108|chr17 ( 196) 293 69.6 1.6e-12
CCDS32722.1 RAB37 gene_id:326624|Hs108|chr17 ( 223) 293 69.7 1.8e-12
CCDS6175.1 RAB2A gene_id:5862|Hs108|chr8 ( 212) 292 69.4 2e-12
CCDS9570.1 RAB2B gene_id:84932|Hs108|chr14 ( 216) 291 69.2 2.3e-12
CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17 ( 216) 290 69.0 2.6e-12
CCDS4962.1 RAB23 gene_id:51715|Hs108|chr6 ( 237) 290 69.1 2.9e-12
CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17 ( 249) 290 69.1 3e-12
CCDS33030.1 RAB4B gene_id:53916|Hs108|chr19 ( 213) 289 68.8 3e-12
CCDS8224.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 288 68.6 3.4e-12
CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3 ( 215) 288 68.6 3.5e-12
CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2 ( 200) 287 68.4 3.8e-12
CCDS3082.1 RAB6B gene_id:51560|Hs108|chr3 ( 208) 287 68.4 3.9e-12
CCDS33497.1 RAB22A gene_id:57403|Hs108|chr20 ( 194) 286 68.2 4.3e-12
CCDS12339.1 RAB8A gene_id:4218|Hs108|chr19 ( 207) 286 68.2 4.5e-12
CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1 ( 203) 284 67.8 5.9e-12
CCDS9003.1 RAB21 gene_id:23011|Hs108|chr12 ( 225) 284 67.8 6.4e-12
CCDS1459.1 RAB29 gene_id:8934|Hs108|chr1 ( 203) 282 67.4 7.9e-12
CCDS34762.2 RAB19 gene_id:401409|Hs108|chr7 ( 217) 281 67.2 9.6e-12
CCDS12372.1 RAB3A gene_id:5864|Hs108|chr19 ( 220) 280 67.0 1.1e-11
CCDS14766.1 RAB39B gene_id:116442|Hs108|chrX ( 213) 279 66.8 1.3e-11
>>CCDS77454.1 RABL2A gene_id:11159|Hs108|chr2 (229 aa)
initn: 1507 init1: 1507 opt: 1507 Z-score: 1684.1 bits: 318.9 E(32554): 1.7e-87
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE0 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
190 200 210 220
>>CCDS33683.1 RABL2B gene_id:11158|Hs108|chr22 (229 aa)
initn: 1498 init1: 1498 opt: 1498 Z-score: 1674.1 bits: 317.0 E(32554): 6.3e-87
Smith-Waterman score: 1498; 98.7% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
:::::::.::::::::::::::::::::::::::::::::::.:::::::::::::::::
CCDS33 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE0 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
:::::::::::::::::::::::::::::::::::::::::::.:::::
CCDS33 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
190 200 210 220
>>CCDS2118.1 RABL2A gene_id:11159|Hs108|chr2 (228 aa)
initn: 1488 init1: 917 opt: 1490 Z-score: 1665.3 bits: 315.4 E(32554): 2e-86
Smith-Waterman score: 1490; 99.6% identity (99.6% similar) in 229 aa overlap (1-229:1-228)
10 20 30 40 50 60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
:::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::
CCDS21 EFRPEIPCIVVANKID-DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170
190 200 210 220
pF1KE0 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
180 190 200 210 220
>>CCDS14102.1 RABL2B gene_id:11158|Hs108|chr22 (228 aa)
initn: 1479 init1: 913 opt: 1481 Z-score: 1655.3 bits: 313.5 E(32554): 7e-86
Smith-Waterman score: 1481; 98.3% identity (99.6% similar) in 229 aa overlap (1-229:1-228)
10 20 30 40 50 60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
:::::::.::::::::::::::::::::::::::::::::::.:::::::::::::::::
CCDS14 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
:::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::
CCDS14 EFRPEIPCIVVANKID-DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170
190 200 210 220
pF1KE0 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
:::::::::::::::::::::::::::::::::::::::::::.:::::
CCDS14 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
180 190 200 210 220
>>CCDS77455.1 RABL2A gene_id:11159|Hs108|chr2 (238 aa)
initn: 1293 init1: 917 opt: 1112 Z-score: 1245.7 bits: 237.8 E(32554): 4.6e-63
Smith-Waterman score: 1460; 95.4% identity (95.4% similar) in 239 aa overlap (1-229:1-238)
10 20 30 40 50 60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVK----------L
:::::::::::::::: :::::::::::::::::::::::::::::::: :
CCDS77 EFRPEIPCIVVANKID-DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKVWLTAEVASKL
130 140 150 160 170
180 190 200 210 220
pF1KE0 FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
180 190 200 210 220 230
>>CCDS46738.1 RABL2B gene_id:11158|Hs108|chr22 (238 aa)
initn: 1284 init1: 913 opt: 1108 Z-score: 1241.2 bits: 237.0 E(32554): 8.1e-63
Smith-Waterman score: 1451; 94.1% identity (95.4% similar) in 239 aa overlap (1-229:1-238)
10 20 30 40 50 60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
:::::::.::::::::::::::::::::::::::::::::::.:::::::::::::::::
CCDS46 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVK----------L
:::::::::::::::: :::::::::::::::::::::::::::::::: :
CCDS46 EFRPEIPCIVVANKID-DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKVWLTAEVASKL
130 140 150 160 170
180 190 200 210 220
pF1KE0 FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
CCDS46 FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
180 190 200 210 220 230
>>CCDS77456.1 RABL2A gene_id:11159|Hs108|chr2 (165 aa)
initn: 1042 init1: 590 opt: 590 Z-score: 668.9 bits: 130.5 E(32554): 6.2e-31
Smith-Waterman score: 918; 72.1% identity (72.1% similar) in 229 aa overlap (1-229:1-165)
10 20 30 40 50 60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
::::::::::::
CCDS77 HTATVDGKTILV------------------------------------------------
70
130 140 150 160 170 180
pF1KE0 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::
CCDS77 ----------------ADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
80 90 100 110
190 200 210 220
pF1KE0 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
120 130 140 150 160
>>CCDS14156.1 RAB9A gene_id:9367|Hs108|chrX (201 aa)
initn: 349 init1: 257 opt: 347 Z-score: 398.0 bits: 80.7 E(32554): 7.5e-16
Smith-Waterman score: 347; 33.0% identity (69.2% similar) in 182 aa overlap (23-194:9-184)
10 20 30 40 50 60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
:.: :::..::::.::.:.. . :. : . : .. . .
CCDS14 MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLN
10 20 30 40
70 80 90 100 110 120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
. :::. . ...:::::::::.:... .:. . :...:... . ...:::.: :.
CCDS14 KDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFI
50 60 70 80 90 100
130 140 150 160 170
pF1KE0 EF----RPE-IPCIVVANKIDADINVTQKSFNFAKKF-----SLPLYFVSAADGTNVVKL
. .:: .: ....::: ::. : : . :. . . : . .:: :.:::.
CCDS14 YYADVKEPESFPFVILGNKI--DISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAA
110 120 130 140 150 160
180 190 200 210 220
pF1KE0 FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
:..:.: ... ..: :...:
CCDS14 FEEAVRRVLA----TEDRSDHLIQTDTVNLHRKPKPSSSCC
170 180 190 200
>>CCDS14515.1 RAB9B gene_id:51209|Hs108|chrX (201 aa)
initn: 283 init1: 264 opt: 343 Z-score: 393.6 bits: 79.9 E(32554): 1.3e-15
Smith-Waterman score: 343; 32.4% identity (68.8% similar) in 176 aa overlap (22-189:8-183)
10 20 30 40 50 60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
.:.: :::..::::.::.:.. . :. : . : .. . .
CCDS14 MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLN
10 20 30 40
70 80 90 100 110 120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
. :::. . ...:::::::::.:... .:. : :...:... . ...::..: :.
CCDS14 RDLEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFI
50 60 70 80 90 100
130 140 150 160 170
pF1KE0 EFR----PE-IPCIVVANKIDA-DINVTQKSFNF--AKKFSLPLYFVSAADGTNVVKLFN
. :: .: .:..::.: : .:: . . .. . : .:: : :::. :.
CCDS14 YYADVKDPEHFPFVVLGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFE
110 120 130 140 150 160
180 190 200 210 220
pF1KE0 DAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
.:.: ... ... . :
CCDS14 EAVRQVLAVEEQLEHCMLGHTIDLNSGSKAGSSCC
170 180 190 200
>>CCDS76691.1 RAB15 gene_id:376267|Hs108|chr14 (212 aa)
initn: 293 init1: 272 opt: 334 Z-score: 383.3 bits: 78.1 E(32554): 5e-15
Smith-Waterman score: 334; 29.1% identity (67.3% similar) in 199 aa overlap (23-216:10-207)
10 20 30 40 50 60
pF1KE0 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
... .:::.:::. :. :: . :. ...:: .. .
CCDS76 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKM
10 20 30 40
70 80 90 100 110 120
pF1KE0 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
.: ::: . ...::::::::.:.. .::..:.. ..:.::. . .:... : ...
CCDS76 KTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD
50 60 70 80 90 100
130 140 150 160 170
pF1KE0 EFRPE-IPCIVVANKIDADINVT---QKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIR
:. :: . :...:: : . . ... ..::.... .: .:: . :. . :. .
CCDS76 EYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTE
110 120 130 140 150 160
180 190 200 210 220
pF1KE0 LAV-SYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
:.. ..... . . . .:: :: ::: :. .::
CCDS76 LVLQAHRKELEGLRMRASNELALAELE-EEEGKPEGPANSSKTCWC
170 180 190 200 210
229 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 00:31:51 2016 done: Thu Nov 3 00:31:52 2016
Total Scan time: 2.060 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]