Result of FASTA (ccds) for
pF1KE0524
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0524, 239 aa
1>>>pF1KE0524 239 - 239 aa - 239 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1397+/-0.000799; mu= 15.8978+/- 0.048
mean_var=77.2567+/-15.998, 0's: 0 Z-trim(108.9): 18 B-trim: 82 in 1/49
Lambda= 0.145917
statistics sampled from 10522 (10532) to 10522 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.691), E-opt: 0.2 (0.324), width: 16
Scan time: 2.230
The best scores are: opt bits E(32554)
CCDS46672.1 DERL3 gene_id:91319|Hs108|chr22 ( 239) 1609 347.7 4e-96
CCDS33615.1 DERL3 gene_id:91319|Hs108|chr22 ( 235) 1402 304.1 5.1e-83
CCDS42986.1 DERL3 gene_id:91319|Hs108|chr22 ( 205) 1386 300.7 4.8e-82
CCDS11073.1 DERL2 gene_id:51009|Hs108|chr17 ( 239) 1158 252.8 1.5e-67
CCDS6337.1 DERL1 gene_id:79139|Hs108|chr8 ( 251) 493 112.8 2.2e-25
CCDS47915.1 DERL1 gene_id:79139|Hs108|chr8 ( 231) 415 96.3 1.8e-20
CCDS76927.1 DERL2 gene_id:51009|Hs108|chr17 ( 74) 280 67.5 2.7e-12
>>CCDS46672.1 DERL3 gene_id:91319|Hs108|chr22 (239 aa)
initn: 1609 init1: 1609 opt: 1609 Z-score: 1839.3 bits: 347.7 E(32554): 4e-96
Smith-Waterman score: 1609; 100.0% identity (100.0% similar) in 239 aa overlap (1-239:1-239)
10 20 30 40 50 60
pF1KE0 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 GQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGH
130 140 150 160 170 180
190 200 210 220 230
pF1KE0 IYYFLEDVFPNQPGGKRLLQTPGFLGLQSSKAPAGSSLTIWTQQSQGGPGTAGELAAPS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 IYYFLEDVFPNQPGGKRLLQTPGFLGLQSSKAPAGSSLTIWTQQSQGGPGTAGELAAPS
190 200 210 220 230
>>CCDS33615.1 DERL3 gene_id:91319|Hs108|chr22 (235 aa)
initn: 1453 init1: 1389 opt: 1402 Z-score: 1603.9 bits: 304.1 E(32554): 5.1e-83
Smith-Waterman score: 1402; 92.6% identity (94.3% similar) in 229 aa overlap (1-229:1-228)
10 20 30 40 50 60
pF1KE0 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 GQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 GQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGH
130 140 150 160 170 180
190 200 210 220 230
pF1KE0 IYYFLEDVFPNQPGGKRLLQTPGFLGLQSSKAPAGSSLTIWTQQSQGGPGTAGELAAPS
::::::::::::::::::::::::: : . ::: . . . : ::
CCDS33 IYYFLEDVFPNQPGGKRLLQTPGFLKLLLD-APAEDPNYLPLPEEQPGPHLPPPQQ
190 200 210 220 230
>>CCDS42986.1 DERL3 gene_id:91319|Hs108|chr22 (205 aa)
initn: 1386 init1: 1386 opt: 1386 Z-score: 1586.5 bits: 300.7 E(32554): 4.8e-82
Smith-Waterman score: 1386; 100.0% identity (100.0% similar) in 205 aa overlap (1-205:1-205)
10 20 30 40 50 60
pF1KE0 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 GQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGH
130 140 150 160 170 180
190 200 210 220 230
pF1KE0 IYYFLEDVFPNQPGGKRLLQTPGFLGLQSSKAPAGSSLTIWTQQSQGGPGTAGELAAPS
:::::::::::::::::::::::::
CCDS42 IYYFLEDVFPNQPGGKRLLQTPGFL
190 200
>>CCDS11073.1 DERL2 gene_id:51009|Hs108|chr17 (239 aa)
initn: 1158 init1: 1158 opt: 1158 Z-score: 1326.2 bits: 252.8 E(32554): 1.5e-67
Smith-Waterman score: 1158; 79.0% identity (95.1% similar) in 205 aa overlap (1-205:1-205)
10 20 30 40 50 60
pF1KE0 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
::.:.: :.::.: :.::::.:::::::::::::..::::::::.:.:..::.:::.::
CCDS11 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
::::::.::.:.:::.:..:::::::::::::::::::::::::: ::::.::. :: ::
CCDS11 FLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 GQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGH
:::. :::::::::.: ::.::::::.::::::::.::::::::::::.::::::::::
CCDS11 GQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGH
130 140 150 160 170 180
190 200 210 220 230
pF1KE0 IYYFLEDVFPNQPGGKRLLQTPGFLGLQSSKAPAGSSLTIWTQQSQGGPGTAGELAAPS
::.:::::::::::: :.:.::..:
CCDS11 IYFFLEDVFPNQPGGIRILKTPSILKAIFDTPDEDPNYNPLPEERPGGFAWGEGQRLGG
190 200 210 220 230
>>CCDS6337.1 DERL1 gene_id:79139|Hs108|chr8 (251 aa)
initn: 479 init1: 365 opt: 493 Z-score: 569.3 bits: 112.8 E(32554): 2.2e-25
Smith-Waterman score: 495; 33.8% identity (64.6% similar) in 237 aa overlap (10-234:8-244)
10 20 30 40 50 60
pF1KE0 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
: ..::.:: . :: : . . .: :.:: :.. :. . .::.:: .:
CCDS63 MSDIGDWFRSIPAITRYWFAATVAVPLVGKLGLISPAYLFLWPEAFLYRFQIWRPITA
10 20 30 40 50
70 80 90 100 110
pF1KE0 FLFF--GP-LGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSL
..: :: :: .. :. :...: :: :.: :: ::..::.::. . ... :: ..
CCDS63 TFYFPVGPGTGFLYLVNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDM
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 FFLGQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIA
.: :. ..:::.. . . :.:. :.: .:::...::. ..:.:.. .:.:
CCDS63 QLLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGNL
120 130 140 150 160 170
180 190 200 210 220
pF1KE0 VGHIYYFLEDVFPNQPGGKRLLQTPGFL---------GLQSSKAPAGSSLTIWTQQSQGG
:::.:.:: .: . ::. .:.:: :: :... .: .: :.. ::
CCDS63 VGHLYFFLMFRYPMDLGGRNFLSTPQFLYRWLPSRRGGVSGFGVPPASMRRAADQNGGGG
180 190 200 210 220 230
230
pF1KE0 PGTAGELAAPS
. :.
CCDS63 RHNWGQGFRLGDQ
240 250
>>CCDS47915.1 DERL1 gene_id:79139|Hs108|chr8 (231 aa)
initn: 395 init1: 281 opt: 415 Z-score: 481.0 bits: 96.3 E(32554): 1.8e-20
Smith-Waterman score: 415; 31.8% identity (61.8% similar) in 217 aa overlap (10-223:8-224)
10 20 30 40 50 60
pF1KE0 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
: ..::.:: . :: : . . .: :.:: :.. :. . .::.:: .:
CCDS47 MSDIGDWFRSIPAITRYWFAATVAVPLVGKLGLISPAYLFLWPEAFLYRFQIWRPITA
10 20 30 40 50
70 80 90 100 110
pF1KE0 FLFF--GP-LGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSL
..: :: :: .. :. :...: :: :.: :: ::..::.::. . ... :: ..
CCDS47 TFYFPVGPGTGFLYLVNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDM
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 FFLGQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIA
.: :. ..:::.. . . :.:. :.: .:::...::. ..:.: .:: :
CCDS47 QLLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSYPMDLGGRN
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 VGHIYYFLEDVFPNQPGGKRLLQTPGFLGLQSSKAPAGSSLTIWTQQSQGGPGTAGELAA
:: .:.. :: . .: ... .:.. : :
CCDS47 FLSTPQFLYRWLPSRRGGVSGFGVPPASMRRAADQNGGGGRHNWGQGFRLGDQ
180 190 200 210 220 230
pF1KE0 PS
>>CCDS76927.1 DERL2 gene_id:51009|Hs108|chr17 (74 aa)
initn: 277 init1: 277 opt: 280 Z-score: 334.1 bits: 67.5 E(32554): 2.7e-12
Smith-Waterman score: 280; 62.3% identity (85.5% similar) in 69 aa overlap (1-69:1-68)
10 20 30 40 50 60
pF1KE0 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
::.:.: :.::.: :.::::.:::::::::::::..::::::::.:.:..::: .: :
CCDS76 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQVLQLDT-
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
..: . :
CCDS76 YIFSWKMYFPINLVE
60 70
239 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 01:56:09 2016 done: Thu Nov 3 01:56:10 2016
Total Scan time: 2.230 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]