Result of FASTA (ccds) for
pF1KE0521
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0521, 276 aa
1>>>pF1KE0521 276 - 276 aa - 276 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4522+/-0.000796; mu= 13.7305+/- 0.048
mean_var=61.2129+/-12.210, 0's: 0 Z-trim(107.0): 17 B-trim: 0 in 0/50
Lambda= 0.163928
statistics sampled from 9276 (9286) to 9276 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.668), E-opt: 0.2 (0.285), width: 16
Scan time: 2.330
The best scores are: opt bits E(32554)
CCDS13772.1 TANGO2 gene_id:128989|Hs108|chr22 ( 276) 1859 448.0 3.4e-126
CCDS63405.1 TANGO2 gene_id:128989|Hs108|chr22 ( 317) 1734 418.5 3e-117
CCDS63407.1 TANGO2 gene_id:128989|Hs108|chr22 ( 178) 1012 247.6 4.6e-66
CCDS63406.1 TANGO2 gene_id:128989|Hs108|chr22 ( 198) 892 219.3 1.8e-57
CCDS74821.1 TANGO2 gene_id:128989|Hs108|chr22 ( 201) 847 208.6 2.8e-54
CCDS63404.1 TANGO2 gene_id:128989|Hs108|chr22 ( 214) 842 207.5 6.8e-54
CCDS74822.1 TANGO2 gene_id:128989|Hs108|chr22 ( 107) 618 154.4 3.2e-38
>>CCDS13772.1 TANGO2 gene_id:128989|Hs108|chr22 (276 aa)
initn: 1859 init1: 1859 opt: 1859 Z-score: 2379.1 bits: 448.0 E(32554): 3.4e-126
Smith-Waterman score: 1859; 100.0% identity (100.0% similar) in 276 aa overlap (1-276:1-276)
10 20 30 40 50 60
pF1KE0 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNT
190 200 210 220 230 240
250 260 270
pF1KE0 IILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
::::::::::::::::::::::::::::::::::::
CCDS13 IILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
250 260 270
>>CCDS63405.1 TANGO2 gene_id:128989|Hs108|chr22 (317 aa)
initn: 1734 init1: 1734 opt: 1734 Z-score: 2218.4 bits: 418.5 E(32554): 3e-117
Smith-Waterman score: 1734; 98.1% identity (100.0% similar) in 263 aa overlap (14-276:55-317)
10 20 30 40
pF1KE0 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNN
.....:::::::::::::::::::::::::
CCDS63 PGQGHSVWDAVRMPLGAGTPVNVQRREDSATEGSHRLILAANRDEFYSRPSKLADFWGNN
30 40 50 60 70 80
50 60 70 80 90 100
pF1KE0 NEILSGLDMEEGKEGGTWLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 NEILSGLDMEEGKEGGTWLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSL
90 100 110 120 130 140
110 120 130 140 150 160
pF1KE0 SYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 SYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETP
150 160 170 180 190 200
170 180 190 200 210 220
pF1KE0 WRKLCFGKQLFLEAVERSQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 WRKLCFGKQLFLEAVERSQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSK
210 220 230 240 250 260
230 240 250 260 270
pF1KE0 YAAVCVRCPGYGTRTNTIILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 YAAVCVRCPGYGTRTNTIILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
270 280 290 300 310
>>CCDS63407.1 TANGO2 gene_id:128989|Hs108|chr22 (178 aa)
initn: 1028 init1: 1012 opt: 1012 Z-score: 1299.6 bits: 247.6 E(32554): 4.6e-66
Smith-Waterman score: 1012; 100.0% identity (100.0% similar) in 150 aa overlap (127-276:29-178)
100 110 120 130 140 150
pF1KE0 TTDVDSLSYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLS
::::::::::::::::::::::::::::::
CCDS63 MAGHQHTWQAGSTHQLPAAAAGLAGPRASTAKGDVICYYGNRGEPDPIVLTPGTYGLS
10 20 30 40 50
160 170 180 190 200 210
pF1KE0 NALLETPWRKLCFGKQLFLEAVERSQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 NALLETPWRKLCFGKQLFLEAVERSQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEY
60 70 80 90 100 110
220 230 240 250 260 270
pF1KE0 VQPMLSKYAAVCVRCPGYGTRTNTIILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 VQPMLSKYAAVCVRCPGYGTRTNTIILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
120 130 140 150 160 170
>>CCDS63406.1 TANGO2 gene_id:128989|Hs108|chr22 (198 aa)
initn: 892 init1: 892 opt: 892 Z-score: 1145.5 bits: 219.3 E(32554): 1.8e-57
Smith-Waterman score: 892; 96.4% identity (100.0% similar) in 137 aa overlap (14-150:55-191)
10 20 30 40
pF1KE0 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNN
.....:::::::::::::::::::::::::
CCDS63 PGQGHSVWDAVRMPLGAGTPVNVQRREDSATEGSHRLILAANRDEFYSRPSKLADFWGNN
30 40 50 60 70 80
50 60 70 80 90 100
pF1KE0 NEILSGLDMEEGKEGGTWLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 NEILSGLDMEEGKEGGTWLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSL
90 100 110 120 130 140
110 120 130 140 150 160
pF1KE0 SYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETP
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 SYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGEPDPIVLTPEPTLSSW
150 160 170 180 190
170 180 190 200 210 220
pF1KE0 WRKLCFGKQLFLEAVERSQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSK
>>CCDS74821.1 TANGO2 gene_id:128989|Hs108|chr22 (201 aa)
initn: 1341 init1: 847 opt: 847 Z-score: 1087.9 bits: 208.6 E(32554): 2.8e-54
Smith-Waterman score: 1194; 72.5% identity (72.5% similar) in 276 aa overlap (1-276:1-201)
10 20 30 40 50 60
pF1KE0 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
::::::
CCDS74 LIAADLR-----------------------------------------------------
190 200 210 220 230 240
pF1KE0 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNT
::::::::::::::::::::::::::::::::::::::
CCDS74 ----------------------QLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNT
130 140 150 160
250 260 270
pF1KE0 IILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
::::::::::::::::::::::::::::::::::::
CCDS74 IILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
170 180 190 200
>>CCDS63404.1 TANGO2 gene_id:128989|Hs108|chr22 (214 aa)
initn: 842 init1: 842 opt: 842 Z-score: 1081.0 bits: 207.5 E(32554): 6.8e-54
Smith-Waterman score: 1315; 77.5% identity (77.5% similar) in 276 aa overlap (1-276:1-214)
10 20 30 40 50 60
pF1KE0 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
:::::::::::::::::::::::::::::
CCDS63 WLGISTRGKLAALTNYLQPQLDWQARGRG-------------------------------
70 80
130 140 150 160 170 180
pF1KE0 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
:::::::::::::::::::::::::::::
CCDS63 -------------------------------TYGLSNALLETPWRKLCFGKQLFLEAVER
90 100 110
190 200 210 220 230 240
pF1KE0 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 SQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNT
120 130 140 150 160 170
250 260 270
pF1KE0 IILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
::::::::::::::::::::::::::::::::::::
CCDS63 IILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS
180 190 200 210
>>CCDS74822.1 TANGO2 gene_id:128989|Hs108|chr22 (107 aa)
initn: 615 init1: 615 opt: 618 Z-score: 799.6 bits: 154.4 E(32554): 3.2e-38
Smith-Waterman score: 618; 91.2% identity (92.2% similar) in 102 aa overlap (1-102:1-102)
10 20 30 40 50 60
pF1KE0 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN
::::::::::::::::::::::::::::: :. : : :
CCDS74 WLGISTRGKLAALTNYLQPQLDWQARGRGSCQTRPSRTRVGSTCSPC
70 80 90 100
130 140 150 160 170 180
pF1KE0 LIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVER
276 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 02:02:29 2016 done: Thu Nov 3 02:02:29 2016
Total Scan time: 2.330 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]