Result of FASTA (omim) for
pF1KE0513
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0513, 331 aa
1>>>pF1KE0513 331 - 331 aa - 331 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9828+/-0.000337; mu= 12.6181+/- 0.021
mean_var=77.1084+/-14.860, 0's: 0 Z-trim(115.4): 49 B-trim: 229 in 2/54
Lambda= 0.146057
statistics sampled from 25811 (25860) to 25811 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.678), E-opt: 0.2 (0.303), width: 16
Scan time: 6.140
The best scores are: opt bits E(85289)
NP_001131077 (OMIM: 608122) gamma-parvin [Homo sap ( 331) 2133 458.8 7.3e-129
XP_005261759 (OMIM: 608122) PREDICTED: gamma-parvi ( 331) 2133 458.8 7.3e-129
NP_071424 (OMIM: 608122) gamma-parvin [Homo sapien ( 331) 2133 458.8 7.3e-129
XP_011528604 (OMIM: 608122) PREDICTED: gamma-parvi ( 398) 2133 458.8 8.6e-129
XP_016884396 (OMIM: 608122) PREDICTED: gamma-parvi ( 317) 1816 392.0 9e-109
XP_016884397 (OMIM: 608122) PREDICTED: gamma-parvi ( 317) 1816 392.0 9e-109
XP_005261653 (OMIM: 608121) PREDICTED: beta-parvin ( 312) 863 191.2 2.5e-48
NP_001230314 (OMIM: 608121) beta-parvin isoform c ( 327) 863 191.2 2.6e-48
NP_037459 (OMIM: 608121) beta-parvin isoform b [Ho ( 364) 863 191.2 2.9e-48
NP_001003828 (OMIM: 608121) beta-parvin isoform a ( 397) 863 191.2 3.1e-48
XP_005253072 (OMIM: 608120) PREDICTED: alpha-parvi ( 328) 850 188.4 1.8e-47
NP_060692 (OMIM: 608120) alpha-parvin [Homo sapien ( 412) 850 188.5 2.1e-47
NP_001230315 (OMIM: 608121) beta-parvin isoform d ( 289) 513 117.4 3.7e-26
XP_016884281 (OMIM: 608121) PREDICTED: beta-parvin ( 341) 513 117.4 4.3e-26
>>NP_001131077 (OMIM: 608122) gamma-parvin [Homo sapiens (331 aa)
initn: 2133 init1: 2133 opt: 2133 Z-score: 2434.5 bits: 458.8 E(85289): 7.3e-129
Smith-Waterman score: 2133; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)
10 20 30 40 50 60
pF1KE0 MEPEFLYDLLQLPKGVEPPAEEELSKGGKKKYLPPTSRKDPKFEELQKVLMEWINATLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEPEFLYDLLQLPKGVEPPAEEELSKGGKKKYLPPTSRKDPKFEELQKVLMEWINATLLP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 EHIVVRSLEEDMFDGLILHHLFQRLAALKLEAEDIALTATSQKHKLTVVLEAVNRSLQLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EHIVVRSLEEDMFDGLILHHLFQRLAALKLEAEDIALTATSQKHKLTVVLEAVNRSLQLE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 EWQAKWSVESIFNKDLLSTLHLLVALAKRFQPDLSLPTNVQVEVITIESTKSGLKSEKLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EWQAKWSVESIFNKDLLSTLHLLVALAKRFQPDLSLPTNVQVEVITIESTKSGLKSEKLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 EQLTEYSTDKDEPPKDVFDELFKLAPEKVNAVKEAIVNFVNQKLDRLGLSVQNLDTQFAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQLTEYSTDKDEPPKDVFDELFKLAPEKVNAVKEAIVNFVNQKLDRLGLSVQNLDTQFAD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 GVILLLLIGQLEGFFLHLKEFYLTPNSPAEMLHNVTLALELLKDEGLLSCPVSPEDIVNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVILLLLIGQLEGFFLHLKEFYLTPNSPAEMLHNVTLALELLKDEGLLSCPVSPEDIVNK
250 260 270 280 290 300
310 320 330
pF1KE0 DAKSTLRVLYGLFCKHTQKAHRDRTPHGAPN
:::::::::::::::::::::::::::::::
NP_001 DAKSTLRVLYGLFCKHTQKAHRDRTPHGAPN
310 320 330
>>XP_005261759 (OMIM: 608122) PREDICTED: gamma-parvin is (331 aa)
initn: 2133 init1: 2133 opt: 2133 Z-score: 2434.5 bits: 458.8 E(85289): 7.3e-129
Smith-Waterman score: 2133; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)
10 20 30 40 50 60
pF1KE0 MEPEFLYDLLQLPKGVEPPAEEELSKGGKKKYLPPTSRKDPKFEELQKVLMEWINATLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEPEFLYDLLQLPKGVEPPAEEELSKGGKKKYLPPTSRKDPKFEELQKVLMEWINATLLP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 EHIVVRSLEEDMFDGLILHHLFQRLAALKLEAEDIALTATSQKHKLTVVLEAVNRSLQLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EHIVVRSLEEDMFDGLILHHLFQRLAALKLEAEDIALTATSQKHKLTVVLEAVNRSLQLE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 EWQAKWSVESIFNKDLLSTLHLLVALAKRFQPDLSLPTNVQVEVITIESTKSGLKSEKLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EWQAKWSVESIFNKDLLSTLHLLVALAKRFQPDLSLPTNVQVEVITIESTKSGLKSEKLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 EQLTEYSTDKDEPPKDVFDELFKLAPEKVNAVKEAIVNFVNQKLDRLGLSVQNLDTQFAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EQLTEYSTDKDEPPKDVFDELFKLAPEKVNAVKEAIVNFVNQKLDRLGLSVQNLDTQFAD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 GVILLLLIGQLEGFFLHLKEFYLTPNSPAEMLHNVTLALELLKDEGLLSCPVSPEDIVNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GVILLLLIGQLEGFFLHLKEFYLTPNSPAEMLHNVTLALELLKDEGLLSCPVSPEDIVNK
250 260 270 280 290 300
310 320 330
pF1KE0 DAKSTLRVLYGLFCKHTQKAHRDRTPHGAPN
:::::::::::::::::::::::::::::::
XP_005 DAKSTLRVLYGLFCKHTQKAHRDRTPHGAPN
310 320 330
>>NP_071424 (OMIM: 608122) gamma-parvin [Homo sapiens] (331 aa)
initn: 2133 init1: 2133 opt: 2133 Z-score: 2434.5 bits: 458.8 E(85289): 7.3e-129
Smith-Waterman score: 2133; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)
10 20 30 40 50 60
pF1KE0 MEPEFLYDLLQLPKGVEPPAEEELSKGGKKKYLPPTSRKDPKFEELQKVLMEWINATLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 MEPEFLYDLLQLPKGVEPPAEEELSKGGKKKYLPPTSRKDPKFEELQKVLMEWINATLLP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 EHIVVRSLEEDMFDGLILHHLFQRLAALKLEAEDIALTATSQKHKLTVVLEAVNRSLQLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 EHIVVRSLEEDMFDGLILHHLFQRLAALKLEAEDIALTATSQKHKLTVVLEAVNRSLQLE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 EWQAKWSVESIFNKDLLSTLHLLVALAKRFQPDLSLPTNVQVEVITIESTKSGLKSEKLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 EWQAKWSVESIFNKDLLSTLHLLVALAKRFQPDLSLPTNVQVEVITIESTKSGLKSEKLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 EQLTEYSTDKDEPPKDVFDELFKLAPEKVNAVKEAIVNFVNQKLDRLGLSVQNLDTQFAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 EQLTEYSTDKDEPPKDVFDELFKLAPEKVNAVKEAIVNFVNQKLDRLGLSVQNLDTQFAD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 GVILLLLIGQLEGFFLHLKEFYLTPNSPAEMLHNVTLALELLKDEGLLSCPVSPEDIVNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 GVILLLLIGQLEGFFLHLKEFYLTPNSPAEMLHNVTLALELLKDEGLLSCPVSPEDIVNK
250 260 270 280 290 300
310 320 330
pF1KE0 DAKSTLRVLYGLFCKHTQKAHRDRTPHGAPN
:::::::::::::::::::::::::::::::
NP_071 DAKSTLRVLYGLFCKHTQKAHRDRTPHGAPN
310 320 330
>>XP_011528604 (OMIM: 608122) PREDICTED: gamma-parvin is (398 aa)
initn: 2133 init1: 2133 opt: 2133 Z-score: 2433.2 bits: 458.8 E(85289): 8.6e-129
Smith-Waterman score: 2133; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:68-398)
10 20 30
pF1KE0 MEPEFLYDLLQLPKGVEPPAEEELSKGGKK
::::::::::::::::::::::::::::::
XP_011 VGDGTLGTPNFCWDHKEKRAAESQLQAWEAMEPEFLYDLLQLPKGVEPPAEEELSKGGKK
40 50 60 70 80 90
40 50 60 70 80 90
pF1KE0 KYLPPTSRKDPKFEELQKVLMEWINATLLPEHIVVRSLEEDMFDGLILHHLFQRLAALKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KYLPPTSRKDPKFEELQKVLMEWINATLLPEHIVVRSLEEDMFDGLILHHLFQRLAALKL
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE0 EAEDIALTATSQKHKLTVVLEAVNRSLQLEEWQAKWSVESIFNKDLLSTLHLLVALAKRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EAEDIALTATSQKHKLTVVLEAVNRSLQLEEWQAKWSVESIFNKDLLSTLHLLVALAKRF
160 170 180 190 200 210
160 170 180 190 200 210
pF1KE0 QPDLSLPTNVQVEVITIESTKSGLKSEKLVEQLTEYSTDKDEPPKDVFDELFKLAPEKVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QPDLSLPTNVQVEVITIESTKSGLKSEKLVEQLTEYSTDKDEPPKDVFDELFKLAPEKVN
220 230 240 250 260 270
220 230 240 250 260 270
pF1KE0 AVKEAIVNFVNQKLDRLGLSVQNLDTQFADGVILLLLIGQLEGFFLHLKEFYLTPNSPAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVKEAIVNFVNQKLDRLGLSVQNLDTQFADGVILLLLIGQLEGFFLHLKEFYLTPNSPAE
280 290 300 310 320 330
280 290 300 310 320 330
pF1KE0 MLHNVTLALELLKDEGLLSCPVSPEDIVNKDAKSTLRVLYGLFCKHTQKAHRDRTPHGAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLHNVTLALELLKDEGLLSCPVSPEDIVNKDAKSTLRVLYGLFCKHTQKAHRDRTPHGAP
340 350 360 370 380 390
pF1KE0 N
:
XP_011 N
>>XP_016884396 (OMIM: 608122) PREDICTED: gamma-parvin is (317 aa)
initn: 1809 init1: 1809 opt: 1816 Z-score: 2073.8 bits: 392.0 E(85289): 9e-109
Smith-Waterman score: 1816; 94.8% identity (96.1% similar) in 305 aa overlap (27-331:16-317)
10 20 30 40 50 60
pF1KE0 MEPEFLYDLLQLPKGVEPPAEEELSKGGKKKYLPPTSRKDPKFEELQKVLMEWINATLLP
:: . : .. .: :: ::::::::::::
XP_016 MGRSWQARGRHSEPGGGPGEKSPSPQKLSPW--SLQ-VLMEWINATLLP
10 20 30 40
70 80 90 100 110 120
pF1KE0 EHIVVRSLEEDMFDGLILHHLFQRLAALKLEAEDIALTATSQKHKLTVVLEAVNRSLQLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EHIVVRSLEEDMFDGLILHHLFQRLAALKLEAEDIALTATSQKHKLTVVLEAVNRSLQLE
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE0 EWQAKWSVESIFNKDLLSTLHLLVALAKRFQPDLSLPTNVQVEVITIESTKSGLKSEKLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EWQAKWSVESIFNKDLLSTLHLLVALAKRFQPDLSLPTNVQVEVITIESTKSGLKSEKLV
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE0 EQLTEYSTDKDEPPKDVFDELFKLAPEKVNAVKEAIVNFVNQKLDRLGLSVQNLDTQFAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EQLTEYSTDKDEPPKDVFDELFKLAPEKVNAVKEAIVNFVNQKLDRLGLSVQNLDTQFAD
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE0 GVILLLLIGQLEGFFLHLKEFYLTPNSPAEMLHNVTLALELLKDEGLLSCPVSPEDIVNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVILLLLIGQLEGFFLHLKEFYLTPNSPAEMLHNVTLALELLKDEGLLSCPVSPEDIVNK
230 240 250 260 270 280
310 320 330
pF1KE0 DAKSTLRVLYGLFCKHTQKAHRDRTPHGAPN
:::::::::::::::::::::::::::::::
XP_016 DAKSTLRVLYGLFCKHTQKAHRDRTPHGAPN
290 300 310
>>XP_016884397 (OMIM: 608122) PREDICTED: gamma-parvin is (317 aa)
initn: 1809 init1: 1809 opt: 1816 Z-score: 2073.8 bits: 392.0 E(85289): 9e-109
Smith-Waterman score: 1816; 94.8% identity (96.1% similar) in 305 aa overlap (27-331:16-317)
10 20 30 40 50 60
pF1KE0 MEPEFLYDLLQLPKGVEPPAEEELSKGGKKKYLPPTSRKDPKFEELQKVLMEWINATLLP
:: . : .. .: :: ::::::::::::
XP_016 MGRSWQARGRHSEPGGGPGEKSPSPQKLSPW--SLQ-VLMEWINATLLP
10 20 30 40
70 80 90 100 110 120
pF1KE0 EHIVVRSLEEDMFDGLILHHLFQRLAALKLEAEDIALTATSQKHKLTVVLEAVNRSLQLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EHIVVRSLEEDMFDGLILHHLFQRLAALKLEAEDIALTATSQKHKLTVVLEAVNRSLQLE
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE0 EWQAKWSVESIFNKDLLSTLHLLVALAKRFQPDLSLPTNVQVEVITIESTKSGLKSEKLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EWQAKWSVESIFNKDLLSTLHLLVALAKRFQPDLSLPTNVQVEVITIESTKSGLKSEKLV
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE0 EQLTEYSTDKDEPPKDVFDELFKLAPEKVNAVKEAIVNFVNQKLDRLGLSVQNLDTQFAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EQLTEYSTDKDEPPKDVFDELFKLAPEKVNAVKEAIVNFVNQKLDRLGLSVQNLDTQFAD
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE0 GVILLLLIGQLEGFFLHLKEFYLTPNSPAEMLHNVTLALELLKDEGLLSCPVSPEDIVNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVILLLLIGQLEGFFLHLKEFYLTPNSPAEMLHNVTLALELLKDEGLLSCPVSPEDIVNK
230 240 250 260 270 280
310 320 330
pF1KE0 DAKSTLRVLYGLFCKHTQKAHRDRTPHGAPN
:::::::::::::::::::::::::::::::
XP_016 DAKSTLRVLYGLFCKHTQKAHRDRTPHGAPN
290 300 310
>>XP_005261653 (OMIM: 608121) PREDICTED: beta-parvin iso (312 aa)
initn: 862 init1: 465 opt: 863 Z-score: 988.6 bits: 191.2 E(85289): 2.5e-48
Smith-Waterman score: 863; 45.2% identity (78.7% similar) in 301 aa overlap (19-316:10-308)
10 20 30 40 50 60
pF1KE0 MEPEFLYDLLQLPKGVEPPAEEELSKGGKKKYLPPTSRKDPKFEELQKVLMEWINATLLP
: . .: .. .. .. :::..::::.:: :::..::: .:.
XP_005 MSPALVDVHPEDTQLEENEERTMIDPTSKEDPKFKELVKVLLDWINDVLVE
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 EHIVVRSLEEDMFDGLILHHLFQRLAALKLEAEDIALTATSQKHKLTVVLEAVNRSLQLE
:.:.:..::::..:: .:..:...::. ::.. ... . .::.:: .:::::. :. .
XP_005 ERIIVKQLEEDLYDGQVLQKLLEKLAGCKLNVAEVTQSEIGQKQKLQTVLEAVHDLLRPR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 EWQAKWSVESIFNKDLLSTLHLLVALAKRFQPDLSLPTNVQVEVITIESTKSGLKSEKLV
: .:::.:: .:.:.. :::::.:: .:. . :: .: :.:..... .. :.: ..
XP_005 GWALRWSVDSIHGKNLVAILHLLVSLAMHFRAPIRLPEHVTVQVVVVRKREGLLHSSHIS
120 130 140 150 160 170
190 200 210 220 230
pF1KE0 EQLT---EYSTDKDEPPKDVFDELFKLAPEKVNAVKEAIVNFVNQKLDRLGLSVQNLDTQ
:.:: :. . : .:.:: :: ::.:...::.....:::..:..:.: : .:.::
XP_005 EELTTTTEMMMGRFE--RDAFDTLFDHAPDKLSVVKKSLITFVNKHLNKLNLEVTELETQ
180 190 200 210 220
240 250 260 270 280 290
pF1KE0 FADGVILLLLIGQLEGFFLHLKEFYLTPNSPAEMLHNVTLALELLKDEGLLSCPVSPEDI
::::: :.::.: :: .:. :..:::::.: . .:::..:.::. : :: . . :::.
XP_005 FADGVYLVLLMGLLEDYFVPLHHFYLTPESFDQKVHNVSFAFELMLDGGLKKPKARPEDV
230 240 250 260 270 280
300 310 320 330
pF1KE0 VNKDAKSTLRVLYGLFCKHTQKAHRDRTPHGAPN
:: : ::::::::.:: :.
XP_005 VNLDLKSTLRVLYNLFTKYKNVE
290 300 310
>>NP_001230314 (OMIM: 608121) beta-parvin isoform c [Hom (327 aa)
initn: 862 init1: 465 opt: 863 Z-score: 988.3 bits: 191.2 E(85289): 2.6e-48
Smith-Waterman score: 863; 45.2% identity (78.7% similar) in 301 aa overlap (19-316:25-323)
10 20 30 40 50
pF1KE0 MEPEFLYDLLQLPKGVEPPAEEELSKGGKKKYLPPTSRKDPKFEELQKVLMEWI
: . .: .. .. .. :::..::::.:: :::..::
NP_001 MSDLQEEGKNAINSPMSPALVDVHPEDTQLEENEERTMIDPTSKEDPKFKELVKVLLDWI
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 NATLLPEHIVVRSLEEDMFDGLILHHLFQRLAALKLEAEDIALTATSQKHKLTVVLEAVN
: .:. :.:.:..::::..:: .:..:...::. ::.. ... . .::.:: .:::::.
NP_001 NDVLVEERIIVKQLEEDLYDGQVLQKLLEKLAGCKLNVAEVTQSEIGQKQKLQTVLEAVH
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 RSLQLEEWQAKWSVESIFNKDLLSTLHLLVALAKRFQPDLSLPTNVQVEVITIESTKSGL
:. . : .:::.:: .:.:.. :::::.:: .:. . :: .: :.:..... .. :
NP_001 DLLRPRGWALRWSVDSIHGKNLVAILHLLVSLAMHFRAPIRLPEHVTVQVVVVRKREGLL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 KSEKLVEQLT---EYSTDKDEPPKDVFDELFKLAPEKVNAVKEAIVNFVNQKLDRLGLSV
.: .. :.:: :. . : .:.:: :: ::.:...::.....:::..:..:.: :
NP_001 HSSHISEELTTTTEMMMGRFE--RDAFDTLFDHAPDKLSVVKKSLITFVNKHLNKLNLEV
190 200 210 220 230
240 250 260 270 280 290
pF1KE0 QNLDTQFADGVILLLLIGQLEGFFLHLKEFYLTPNSPAEMLHNVTLALELLKDEGLLSCP
.:.::::::: :.::.: :: .:. :..:::::.: . .:::..:.::. : :: .
NP_001 TELETQFADGVYLVLLMGLLEDYFVPLHHFYLTPESFDQKVHNVSFAFELMLDGGLKKPK
240 250 260 270 280 290
300 310 320 330
pF1KE0 VSPEDIVNKDAKSTLRVLYGLFCKHTQKAHRDRTPHGAPN
. :::.:: : ::::::::.:: :.
NP_001 ARPEDVVNLDLKSTLRVLYNLFTKYKNVE
300 310 320
>>NP_037459 (OMIM: 608121) beta-parvin isoform b [Homo s (364 aa)
initn: 862 init1: 465 opt: 863 Z-score: 987.5 bits: 191.2 E(85289): 2.9e-48
Smith-Waterman score: 863; 45.2% identity (78.7% similar) in 301 aa overlap (19-316:62-360)
10 20 30 40
pF1KE0 MEPEFLYDLLQLPKGVEPPAEEELSKGGKKKYLPPTSRKDPKFEELQK
: . .: .. .. .. :::..::::.:: :
NP_037 KRRAREVSDLQEEGKNAINSPMSPALVDVHPEDTQLEENEERTMIDPTSKEDPKFKELVK
40 50 60 70 80 90
50 60 70 80 90 100
pF1KE0 VLMEWINATLLPEHIVVRSLEEDMFDGLILHHLFQRLAALKLEAEDIALTATSQKHKLTV
::..::: .:. :.:.:..::::..:: .:..:...::. ::.. ... . .::.:: .
NP_037 VLLDWINDVLVEERIIVKQLEEDLYDGQVLQKLLEKLAGCKLNVAEVTQSEIGQKQKLQT
100 110 120 130 140 150
110 120 130 140 150 160
pF1KE0 VLEAVNRSLQLEEWQAKWSVESIFNKDLLSTLHLLVALAKRFQPDLSLPTNVQVEVITIE
:::::. :. . : .:::.:: .:.:.. :::::.:: .:. . :: .: :.:....
NP_037 VLEAVHDLLRPRGWALRWSVDSIHGKNLVAILHLLVSLAMHFRAPIRLPEHVTVQVVVVR
160 170 180 190 200 210
170 180 190 200 210 220
pF1KE0 STKSGLKSEKLVEQLT---EYSTDKDEPPKDVFDELFKLAPEKVNAVKEAIVNFVNQKLD
. .. :.: .. :.:: :. . : .:.:: :: ::.:...::.....:::..:.
NP_037 KREGLLHSSHISEELTTTTEMMMGRFE--RDAFDTLFDHAPDKLSVVKKSLITFVNKHLN
220 230 240 250 260
230 240 250 260 270 280
pF1KE0 RLGLSVQNLDTQFADGVILLLLIGQLEGFFLHLKEFYLTPNSPAEMLHNVTLALELLKDE
.:.: : .:.::::::: :.::.: :: .:. :..:::::.: . .:::..:.::. :
NP_037 KLNLEVTELETQFADGVYLVLLMGLLEDYFVPLHHFYLTPESFDQKVHNVSFAFELMLDG
270 280 290 300 310 320
290 300 310 320 330
pF1KE0 GLLSCPVSPEDIVNKDAKSTLRVLYGLFCKHTQKAHRDRTPHGAPN
:: . . :::.:: : ::::::::.:: :.
NP_037 GLKKPKARPEDVVNLDLKSTLRVLYNLFTKYKNVE
330 340 350 360
>>NP_001003828 (OMIM: 608121) beta-parvin isoform a [Hom (397 aa)
initn: 862 init1: 465 opt: 863 Z-score: 987.0 bits: 191.2 E(85289): 3.1e-48
Smith-Waterman score: 863; 45.2% identity (78.7% similar) in 301 aa overlap (19-316:95-393)
10 20 30 40
pF1KE0 MEPEFLYDLLQLPKGVEPPAEEELSKGGKKKYLPPTSRKDPKFEELQK
: . .: .. .. .. :::..::::.:: :
NP_001 EYAQGGVSDLQEEGKNAINSPMSPALVDVHPEDTQLEENEERTMIDPTSKEDPKFKELVK
70 80 90 100 110 120
50 60 70 80 90 100
pF1KE0 VLMEWINATLLPEHIVVRSLEEDMFDGLILHHLFQRLAALKLEAEDIALTATSQKHKLTV
::..::: .:. :.:.:..::::..:: .:..:...::. ::.. ... . .::.:: .
NP_001 VLLDWINDVLVEERIIVKQLEEDLYDGQVLQKLLEKLAGCKLNVAEVTQSEIGQKQKLQT
130 140 150 160 170 180
110 120 130 140 150 160
pF1KE0 VLEAVNRSLQLEEWQAKWSVESIFNKDLLSTLHLLVALAKRFQPDLSLPTNVQVEVITIE
:::::. :. . : .:::.:: .:.:.. :::::.:: .:. . :: .: :.:....
NP_001 VLEAVHDLLRPRGWALRWSVDSIHGKNLVAILHLLVSLAMHFRAPIRLPEHVTVQVVVVR
190 200 210 220 230 240
170 180 190 200 210 220
pF1KE0 STKSGLKSEKLVEQLT---EYSTDKDEPPKDVFDELFKLAPEKVNAVKEAIVNFVNQKLD
. .. :.: .. :.:: :. . : .:.:: :: ::.:...::.....:::..:.
NP_001 KREGLLHSSHISEELTTTTEMMMGRFE--RDAFDTLFDHAPDKLSVVKKSLITFVNKHLN
250 260 270 280 290 300
230 240 250 260 270 280
pF1KE0 RLGLSVQNLDTQFADGVILLLLIGQLEGFFLHLKEFYLTPNSPAEMLHNVTLALELLKDE
.:.: : .:.::::::: :.::.: :: .:. :..:::::.: . .:::..:.::. :
NP_001 KLNLEVTELETQFADGVYLVLLMGLLEDYFVPLHHFYLTPESFDQKVHNVSFAFELMLDG
310 320 330 340 350 360
290 300 310 320 330
pF1KE0 GLLSCPVSPEDIVNKDAKSTLRVLYGLFCKHTQKAHRDRTPHGAPN
:: . . :::.:: : ::::::::.:: :.
NP_001 GLKKPKARPEDVVNLDLKSTLRVLYNLFTKYKNVE
370 380 390
331 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 03:00:50 2016 done: Thu Nov 3 03:00:51 2016
Total Scan time: 6.140 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]