Result of FASTA (omim) for
pF1KE0481
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0481, 419 aa
1>>>pF1KE0481 419 - 419 aa - 419 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8955+/-0.000464; mu= 9.5573+/- 0.029
mean_var=165.9794+/-36.055, 0's: 0 Z-trim(113.7): 302 B-trim: 541 in 1/58
Lambda= 0.099551
statistics sampled from 22709 (23130) to 22709 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.632), E-opt: 0.2 (0.271), width: 16
Scan time: 8.890
The best scores are: opt bits E(85289)
NP_001171754 (OMIM: 176390) pregnancy-specific bet ( 419) 2827 418.8 1.3e-116
NP_008836 (OMIM: 176390) pregnancy-specific beta-1 ( 426) 2791 413.6 4.6e-115
NP_001171755 (OMIM: 176390) pregnancy-specific bet ( 417) 2786 412.9 7.5e-115
NP_001284702 (OMIM: 176390) pregnancy-specific bet ( 428) 2786 412.9 7.6e-115
NP_001123639 (OMIM: 176397) pregnancy-specific bet ( 419) 2624 389.6 7.6e-108
NP_874366 (OMIM: 176397) pregnancy-specific beta-1 ( 426) 2594 385.3 1.5e-106
NP_002774 (OMIM: 176396) putative pregnancy-specif ( 419) 2546 378.4 1.8e-104
NP_066296 (OMIM: 176392) pregnancy-specific beta-1 ( 428) 2546 378.5 1.8e-104
NP_002771 (OMIM: 176393) pregnancy-specific beta-1 ( 419) 2489 370.3 5.2e-102
XP_016882486 (OMIM: 176393) PREDICTED: pregnancy-s ( 426) 2463 366.5 7e-101
NP_002773 (OMIM: 176395) pregnancy-specific beta-1 ( 435) 2435 362.5 1.2e-99
NP_001027020 (OMIM: 176395) pregnancy-specific bet ( 424) 2428 361.5 2.3e-99
XP_016882485 (OMIM: 176393) PREDICTED: pregnancy-s ( 435) 2359 351.6 2.2e-96
XP_016882496 (OMIM: 176398) PREDICTED: pregnancy-s ( 436) 2357 351.3 2.7e-96
XP_016882493 (OMIM: 176398) PREDICTED: pregnancy-s ( 495) 2357 351.4 3e-96
NP_002775 (OMIM: 176398) pregnancy-specific beta-1 ( 426) 2350 350.3 5.4e-96
XP_016882484 (OMIM: 176393) PREDICTED: pregnancy-s ( 442) 2333 347.9 3e-95
NP_001123640 (OMIM: 176397) pregnancy-specific bet ( 297) 1772 267.1 4.1e-71
XP_011525289 (OMIM: 176397) PREDICTED: pregnancy-s ( 306) 1772 267.1 4.2e-71
NP_001193579 (OMIM: 176396) putative pregnancy-spe ( 297) 1711 258.4 1.8e-68
XP_011525290 (OMIM: 176397) PREDICTED: pregnancy-s ( 258) 1671 252.6 8.7e-67
NP_001303268 (OMIM: 176393) pregnancy-specific bet ( 297) 1670 252.5 1.1e-66
XP_011525427 (OMIM: 176390) PREDICTED: pregnancy-s ( 333) 1605 243.2 7.4e-64
XP_016881635 (OMIM: 114890) PREDICTED: carcinoembr ( 617) 1520 231.3 5.3e-60
XP_011525288 (OMIM: 176397) PREDICTED: pregnancy-s ( 326) 1483 225.7 1.4e-58
XP_011525428 (OMIM: 176392) PREDICTED: pregnancy-s ( 357) 1483 225.7 1.5e-58
NP_001276971 (OMIM: 176396) putative pregnancy-spe ( 238) 1472 223.9 3.3e-58
NP_112536 (OMIM: 176391) pregnancy-specific beta-1 ( 335) 1463 222.8 1e-57
XP_011525429 (OMIM: 176392) PREDICTED: pregnancy-s ( 272) 1455 221.6 2e-57
NP_002776 (OMIM: 176401) pregnancy-specific beta-1 ( 335) 1455 221.7 2.3e-57
NP_998798 (OMIM: 176393) pregnancy-specific beta-1 ( 326) 1417 216.2 9.7e-56
XP_016882491 (OMIM: 176393) PREDICTED: pregnancy-s ( 333) 1417 216.2 9.9e-56
NP_001288637 (OMIM: 176398) pregnancy-specific bet ( 333) 1369 209.3 1.2e-53
XP_005259132 (OMIM: 176398) PREDICTED: pregnancy-s ( 402) 1369 209.4 1.3e-53
NP_001317453 (OMIM: 176390) pregnancy-specific bet ( 326) 1314 201.4 2.8e-51
XP_005259122 (OMIM: 176390) PREDICTED: pregnancy-s ( 333) 1314 201.4 2.8e-51
XP_016882489 (OMIM: 176393) PREDICTED: pregnancy-s ( 342) 1287 197.5 4.2e-50
XP_016882488 (OMIM: 176393) PREDICTED: pregnancy-s ( 349) 1287 197.5 4.3e-50
NP_002772 (OMIM: 176394) pregnancy-specific beta-1 ( 335) 1194 184.2 4.3e-46
NP_001123486 (OMIM: 176394) pregnancy-specific bet ( 335) 1194 184.2 4.3e-46
XP_016882492 (OMIM: 176394) PREDICTED: pregnancy-s ( 335) 1194 184.2 4.3e-46
NP_001263424 (OMIM: 176393) pregnancy-specific bet ( 326) 1181 182.3 1.6e-45
XP_016882490 (OMIM: 176393) PREDICTED: pregnancy-s ( 333) 1181 182.3 1.6e-45
NP_001288636 (OMIM: 176398) pregnancy-specific bet ( 333) 1132 175.3 2.1e-43
XP_016882494 (OMIM: 176398) PREDICTED: pregnancy-s ( 402) 1132 175.3 2.4e-43
XP_016882487 (OMIM: 176393) PREDICTED: pregnancy-s ( 349) 1129 174.9 2.9e-43
XP_016881687 (OMIM: 615747) PREDICTED: carcinoembr ( 255) 961 150.6 4.3e-36
XP_011524643 (OMIM: 615747) PREDICTED: carcinoembr ( 255) 961 150.6 4.3e-36
XP_011524644 (OMIM: 615747) PREDICTED: carcinoembr ( 255) 961 150.6 4.3e-36
NP_001288638 (OMIM: 176398) pregnancy-specific bet ( 240) 826 131.2 2.8e-30
>>NP_001171754 (OMIM: 176390) pregnancy-specific beta-1- (419 aa)
initn: 2827 init1: 2827 opt: 2827 Z-score: 2214.8 bits: 418.8 E(85289): 1.3e-116
Smith-Waterman score: 2827; 100.0% identity (100.0% similar) in 419 aa overlap (1-419:1-419)
10 20 30 40 50 60
pF1KE0 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
370 380 390 400 410
>>NP_008836 (OMIM: 176390) pregnancy-specific beta-1-gly (426 aa)
initn: 2784 init1: 2784 opt: 2791 Z-score: 2186.7 bits: 413.6 E(85289): 4.6e-115
Smith-Waterman score: 2791; 99.0% identity (99.3% similar) in 419 aa overlap (1-419:1-419)
10 20 30 40 50 60
pF1KE0 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
:::::::::::::::::::::::::::::::::::::::::::::::::::::: .:
NP_008 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSGKWIPA
370 380 390 400 410 420
NP_008 SLAIGF
>>NP_001171755 (OMIM: 176390) pregnancy-specific beta-1- (417 aa)
initn: 3105 init1: 2786 opt: 2786 Z-score: 2183.0 bits: 412.9 E(85289): 7.5e-115
Smith-Waterman score: 2786; 99.8% identity (100.0% similar) in 415 aa overlap (1-415:1-415)
10 20 30 40 50 60
pF1KE0 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::.
NP_001 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSEAL
370 380 390 400 410
>>NP_001284702 (OMIM: 176390) pregnancy-specific beta-1- (428 aa)
initn: 3105 init1: 2786 opt: 2786 Z-score: 2182.8 bits: 412.9 E(85289): 7.6e-115
Smith-Waterman score: 2786; 99.3% identity (99.8% similar) in 417 aa overlap (1-417:1-417)
10 20 30 40 50 60
pF1KE0 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
:::::::::::::::::::::::::::::::::::::::::::::::::::::: ..
NP_001 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSAYSSSI
370 380 390 400 410 420
NP_001 NYTSGNRN
>>NP_001123639 (OMIM: 176397) pregnancy-specific beta-1- (419 aa)
initn: 2948 init1: 2624 opt: 2624 Z-score: 2057.2 bits: 389.6 E(85289): 7.6e-108
Smith-Waterman score: 2624; 92.8% identity (96.9% similar) in 419 aa overlap (1-419:1-419)
10 20 30 40 50 60
pF1KE0 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
:: :::::::::: ::::::::::::::: ::::::::::.:::::::::::::::::::
NP_001 MGLLSAPPCTQRITWKGLLLTASLLNFWNPPTTAQVTIEAQPTKVSEGKDVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
:::::::::::.::::::::::::::.::::::::::::: ::::::::::::.::::::
NP_001 NLTGYIWYKGQIRDLYHYITSYVVDGQIIIYGPAYSGRETIYSNASLLIQNVTQEDAGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
::::: : : .:::::.:::::.:::::::::::.:::::.:::::::::::::::::::
NP_001 TLHIIMGGDENRGVTGHFTFTLYLETPKPSISSSKLNPREAMEAVSLTCDPETPDASYLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
:::::::::.: :.:::::::::::::::::::::::::::::::::::: :::::::::
NP_001 WMNGQSLPMSHRLQLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPFTLNLLPKLP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
:::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPYITINNLKPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
::::::::::::::.:::::: ::::::::::::::::::::::::::::::::::::::
NP_001 TRNETGPYQCEIRDQYGGIRSYPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
::::::::: :::: :::::: .:::::::::.::::::::::::::::::.:::::.:
NP_001 PAQYSWTINGKFQLSGQKLFIPQITTKHSGLYACSVRNSATGKESSKSMTVKVSDWTLP
370 380 390 400 410
>>NP_874366 (OMIM: 176397) pregnancy-specific beta-1-gly (426 aa)
initn: 2585 init1: 2585 opt: 2594 Z-score: 2033.8 bits: 385.3 E(85289): 1.5e-106
Smith-Waterman score: 2594; 92.1% identity (96.2% similar) in 419 aa overlap (1-419:1-419)
10 20 30 40 50 60
pF1KE0 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
:: :::::::::: ::::::::::::::: ::::::::::.:::::::::::::::::::
NP_874 MGLLSAPPCTQRITWKGLLLTASLLNFWNPPTTAQVTIEAQPTKVSEGKDVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
:::::::::::.::::::::::::::.::::::::::::: ::::::::::::.::::::
NP_874 NLTGYIWYKGQIRDLYHYITSYVVDGQIIIYGPAYSGRETIYSNASLLIQNVTQEDAGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
::::: : : .:::::.:::::.:::::::::::.:::::.:::::::::::::::::::
NP_874 TLHIIMGGDENRGVTGHFTFTLYLETPKPSISSSKLNPREAMEAVSLTCDPETPDASYLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
:::::::::.: :.:::::::::::::::::::::::::::::::::::: :::::::::
NP_874 WMNGQSLPMSHRLQLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPFTLNLLPKLP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
:::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::
NP_874 KPYITINNLKPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
::::::::::::::.:::::: ::::::::::::::::::::::::::::::::::::::
NP_874 TRNETGPYQCEIRDQYGGIRSYPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
::::::::: :::: :::::: .:::::::::.::::::::::::::::::.:: .:
NP_874 PAQYSWTINGKFQLSGQKLFIPQITTKHSGLYACSVRNSATGKESSKSMTVKVSGKRIPV
370 380 390 400 410 420
NP_874 SLAIGI
>>NP_002774 (OMIM: 176396) putative pregnancy-specific b (419 aa)
initn: 2871 init1: 2546 opt: 2546 Z-score: 1996.6 bits: 378.4 E(85289): 1.8e-104
Smith-Waterman score: 2546; 90.0% identity (95.7% similar) in 419 aa overlap (1-419:1-419)
10 20 30 40 50 60
pF1KE0 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
:: ::::::::.: ::::::::::::::: ::::::::::.: :::::::::::::::::
NP_002 MGPLSAPPCTQHITWKGLLLTASLLNFWNPPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
:::::::::::.::::::.:::.:::.:: ::::::::::.::::::::::::.::.:::
NP_002 NLTGYIWYKGQIRDLYHYVTSYIVDGQIIKYGPAYSGRETVYSNASLLIQNVTQEDTGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
:::::: ::: ::::::::::.::::::::::::.::::. ::: ::::::::::::::
NP_002 TLHIIKRGDGTGGVTGRFTFTLYLETPKPSISSSNFNPREATEAVILTCDPETPDASYLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
:::::::::::::.::::::::.:.:::.:::::::::::::::::::::::::::::::
NP_002 WMNGQSLPMTHSLQLSETNRTLYLFGVTNYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
::::::::::::::::: .::::::::::::::::::::::::::::: :::::::::::
NP_002 KPYITINNLNPRENKDVSTFTCEPKSENYTYIWWLNGQSLPVSPRVKRRIENRILILPSV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
::::::::::::::::::::::::::::::::::::::::::::.::. ::::: :::::
NP_002 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYHSGQNLYLSCFADSNP
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
::::::::: :::: :::: : .:::::::::.:::::::::::::::.::.:::::.:
NP_002 PAQYSWTINGKFQLSGQKLSIPQITTKHSGLYACSVRNSATGKESSKSVTVRVSDWTLP
370 380 390 400 410
>>NP_066296 (OMIM: 176392) pregnancy-specific beta-1-gly (428 aa)
initn: 2546 init1: 2546 opt: 2546 Z-score: 1996.5 bits: 378.5 E(85289): 1.8e-104
Smith-Waterman score: 2546; 91.5% identity (96.1% similar) in 414 aa overlap (1-414:1-414)
10 20 30 40 50 60
pF1KE0 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
:: :::::::::: :::::::: :::::::::::::::::::::::.:::::::::::::
NP_066 MGPLSAPPCTQRITWKGLLLTALLLNFWNLPTTAQVTIEAEPTKVSKGKDVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
::.:::::::::.:::::::::::::.:::::::::::::.:::::::::::::::::::
NP_066 NLAGYIWYKGQMKDLYHYITSYVVDGQIIIYGPAYSGRETVYSNASLLIQNVTREDAGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
::::.: ::::: ::.:::::.::::::::::::: ::: :::::::::::::::::::
NP_066 TLHIVKRGDGTRGETGHFTFTLYLETPKPSISSSNLYPREDMEAVSLTCDPETPDASYLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
:::::::::::::.::...:::::.:::::::::::::::::::::::::::::::::::
NP_066 WMNGQSLPMTHSLQLSKNKRTLFLFGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
:::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::
NP_066 KPYITINNLNPRENKDVLAFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
::::::::::::.:::::::: ::::::::::::::::::::::.::: ::::: :::::
NP_066 TRNETGPYQCEIQDRYGGIRSYPVTLNVLYGPDLPRIYPSFTYYHSGENLYLSCFADSNP
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
::.:::::: :::: :::::: .:::::::::.::::::::: ::::::::.::
NP_066 PAEYSWTINGKFQLSGQKLFIPQITTKHSGLYACSVRNSATGMESSKSMTVKVSAPSGTG
370 380 390 400 410 420
NP_066 HLPGLNPL
>>NP_002771 (OMIM: 176393) pregnancy-specific beta-1-gly (419 aa)
initn: 2813 init1: 2489 opt: 2489 Z-score: 1952.4 bits: 370.3 E(85289): 5.2e-102
Smith-Waterman score: 2489; 88.5% identity (93.6% similar) in 419 aa overlap (1-419:1-419)
10 20 30 40 50 60
pF1KE0 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
:: :::::::::: :::.::::::::::: ::::::::::.: :::::::::::::::::
NP_002 MGPLSAPPCTQRITWKGVLLTASLLNFWNPPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
::.::::::::: ::::::::::::. ::::::::::: .::::::::::::.::::::
NP_002 NLAGYIWYKGQMTYLYHYITSYVVDGQRIIYGPAYSGRERVYSNASLLIQNVTQEDAGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
:::::: ::: ::::.:::::::::::::::::::::::.:::: ::::: :: ::: :
NP_002 TLHIIKRRDGTGGVTGHFTFTLHLETPKPSISSSNLNPREAMEAVILTCDPATPAASYQW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
::::::::::: :.::.::::::..::::: ::::::::::::::::::::::::::::
NP_002 WMNGQSLPMTHRLQLSKTNRTLFIFGVTKYIAGPYECEIRNPVSASRSDPVTLNLLPKLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
::::::::::::::::::.:::::::.:::::::::::::::::::::::::::::::.:
NP_002 KPYITINNLNPRENKDVLTFTCEPKSKNYTYIWWLNGQSLPVSPRVKRPIENRILILPNV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
::::::::::::::::::::::::::::::::::: :::::::::::: ::::: :.:::
NP_002 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPSIYPSFTYYRSGENLYLSCFAESNP
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
:::::::: :::: :::: : .:::::::::.:::::::::::::::.::.:::: .:
NP_002 RAQYSWTINGKFQLSGQKLSIPQITTKHSGLYACSVRNSATGKESSKSITVKVSDWILP
370 380 390 400 410
>>XP_016882486 (OMIM: 176393) PREDICTED: pregnancy-speci (426 aa)
initn: 2456 init1: 2456 opt: 2463 Z-score: 1932.1 bits: 366.5 E(85289): 7e-101
Smith-Waterman score: 2463; 88.1% identity (93.1% similar) in 419 aa overlap (1-419:1-419)
10 20 30 40 50 60
pF1KE0 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
:: :::::::::: :::.::::::::::: ::::::::::.: :::::::::::::::::
XP_016 MGPLSAPPCTQRITWKGVLLTASLLNFWNPPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
::.::::::::: ::::::::::::. ::::::::::: .::::::::::::.::::::
XP_016 NLAGYIWYKGQMTYLYHYITSYVVDGQRIIYGPAYSGRERVYSNASLLIQNVTQEDAGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
:::::: ::: ::::.:::::::::::::::::::::::.:::: ::::: :: ::: :
XP_016 TLHIIKRRDGTGGVTGHFTFTLHLETPKPSISSSNLNPREAMEAVILTCDPATPAASYQW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
::::::::::: :.::.::::::..::::: ::::::::::::::::::::::::::::
XP_016 WMNGQSLPMTHRLQLSKTNRTLFIFGVTKYIAGPYECEIRNPVSASRSDPVTLNLLPKLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
::::::::::::::::::.:::::::.:::::::::::::::::::::::::::::::.:
XP_016 KPYITINNLNPRENKDVLTFTCEPKSKNYTYIWWLNGQSLPVSPRVKRPIENRILILPNV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
::::::::::::::::::::::::::::::::::: :::::::::::: ::::: :.:::
XP_016 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPSIYPSFTYYRSGENLYLSCFAESNP
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
:::::::: :::: :::: : .:::::::::.:::::::::::::::.::.:: .:
XP_016 RAQYSWTINGKFQLSGQKLSIPQITTKHSGLYACSVRNSATGKESSKSITVKVSGKWIPA
370 380 390 400 410 420
XP_016 SLAIGI
419 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 05:14:09 2016 done: Thu Nov 3 05:14:11 2016
Total Scan time: 8.890 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]