Result of FASTA (ccds) for
pF1KE0479
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0479, 315 aa
1>>>pF1KE0479 315 - 315 aa - 315 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6877+/-0.00109; mu= 14.9102+/- 0.066
mean_var=98.5859+/-19.273, 0's: 0 Z-trim(105.7): 44 B-trim: 6 in 1/50
Lambda= 0.129172
statistics sampled from 8539 (8565) to 8539 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.627), E-opt: 0.2 (0.263), width: 16
Scan time: 2.250
The best scores are: opt bits E(32554)
CCDS5805.1 CALU gene_id:813|Hs108|chr7 ( 315) 2155 412.1 2.9e-115
CCDS56506.1 CALU gene_id:813|Hs108|chr7 ( 323) 2155 412.1 2.9e-115
CCDS47703.1 CALU gene_id:813|Hs108|chr7 ( 315) 2004 383.9 8.6e-107
CCDS56507.1 CALU gene_id:813|Hs108|chr7 ( 323) 2004 383.9 8.7e-107
CCDS56508.1 CALU gene_id:813|Hs108|chr7 ( 224) 1470 284.3 6e-77
CCDS7876.1 RCN1 gene_id:5954|Hs108|chr11 ( 331) 1318 256.1 2.7e-68
CCDS12771.1 RCN3 gene_id:57333|Hs108|chr19 ( 328) 1089 213.4 1.9e-55
CCDS10291.1 RCN2 gene_id:5955|Hs108|chr15 ( 317) 735 147.5 1.3e-35
CCDS61719.1 RCN2 gene_id:5955|Hs108|chr15 ( 335) 510 105.5 5.8e-23
CCDS30553.1 SDF4 gene_id:51150|Hs108|chr1 ( 362) 316 69.4 4.7e-12
>>CCDS5805.1 CALU gene_id:813|Hs108|chr7 (315 aa)
initn: 2155 init1: 2155 opt: 2155 Z-score: 2182.8 bits: 412.1 E(32554): 2.9e-115
Smith-Waterman score: 2155; 99.7% identity (99.7% similar) in 315 aa overlap (1-315:1-315)
10 20 30 40 50 60
pF1KE0 MDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYGHDAFLGAEEAKT
::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
CCDS58 MDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYDHDAFLGAEEAKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQWKGHDLNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQWKGHDLNE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DGLVSWEEYKNATYGYVLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIATKEEFTAFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DGLVSWEEYKNATYGYVLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIATKEEFTAFL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 HPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKTEREQFVEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 HPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKTEREQFVEF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 RDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGS
250 260 270 280 290 300
310
pF1KE0 QATDFGEALVRHDEF
:::::::::::::::
CCDS58 QATDFGEALVRHDEF
310
>>CCDS56506.1 CALU gene_id:813|Hs108|chr7 (323 aa)
initn: 2155 init1: 2155 opt: 2155 Z-score: 2182.7 bits: 412.1 E(32554): 2.9e-115
Smith-Waterman score: 2155; 99.7% identity (99.7% similar) in 315 aa overlap (1-315:9-323)
10 20 30 40 50
pF1KE0 MDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYGHDAF
::::::::::::::::::::::::::::::::::::::::::::::: ::::
CCDS56 MKETDLIIMDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYDHDAF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LGAEEAKTFDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LGAEEAKTFDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 WKGHDLNEDGLVSWEEYKNATYGYVLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 WKGHDLNEDGLVSWEEYKNATYGYVLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIAT
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 KEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKT
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE0 EREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 EREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVD
250 260 270 280 290 300
300 310
pF1KE0 KYDLFVGSQATDFGEALVRHDEF
:::::::::::::::::::::::
CCDS56 KYDLFVGSQATDFGEALVRHDEF
310 320
>>CCDS47703.1 CALU gene_id:813|Hs108|chr7 (315 aa)
initn: 2004 init1: 2004 opt: 2004 Z-score: 2030.8 bits: 383.9 E(32554): 8.6e-107
Smith-Waterman score: 2004; 92.4% identity (96.8% similar) in 315 aa overlap (1-315:1-315)
10 20 30 40 50 60
pF1KE0 MDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYGHDAFLGAEEAKT
::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
CCDS47 MDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYDHDAFLGAEEAKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQWKGHDLNE
:::::::::::::: ::.:::.::::::: :::.::: :::..::..:: ::. :.:.
CCDS47 FDQLTPEESKERLGMIVDKIDADKDGFVTEGELKSWIKHAQKKYIYDNVENQWQEFDMNQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DGLVSWEEYKNATYGYVLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIATKEEFTAFL
:::.::.::.:.::: :::::::::::::::::::::::::::::::::::::::::::
CCDS47 DGLISWDEYRNVTYGTYLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIATKEEFTAFL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 HPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKTEREQFVEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 HPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKTEREQFVEF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 RDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 RDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGS
250 260 270 280 290 300
310
pF1KE0 QATDFGEALVRHDEF
:::::::::::::::
CCDS47 QATDFGEALVRHDEF
310
>>CCDS56507.1 CALU gene_id:813|Hs108|chr7 (323 aa)
initn: 2004 init1: 2004 opt: 2004 Z-score: 2030.6 bits: 383.9 E(32554): 8.7e-107
Smith-Waterman score: 2004; 92.4% identity (96.8% similar) in 315 aa overlap (1-315:9-323)
10 20 30 40 50
pF1KE0 MDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYGHDAF
::::::::::::::::::::::::::::::::::::::::::::::: ::::
CCDS56 MKETDLIIMDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYDHDAF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LGAEEAKTFDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQ
:::::::::::::::::::::: ::.:::.::::::: :::.::: :::..::..:: :
CCDS56 LGAEEAKTFDQLTPEESKERLGMIVDKIDADKDGFVTEGELKSWIKHAQKKYIYDNVENQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 WKGHDLNEDGLVSWEEYKNATYGYVLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIAT
:. :.:.:::.::.::.:.::: :::::::::::::::::::::::::::::::::::
CCDS56 WQEFDMNQDGLISWDEYRNVTYGTYLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIAT
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 KEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKT
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE0 EREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 EREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVD
250 260 270 280 290 300
300 310
pF1KE0 KYDLFVGSQATDFGEALVRHDEF
:::::::::::::::::::::::
CCDS56 KYDLFVGSQATDFGEALVRHDEF
310 320
>>CCDS56508.1 CALU gene_id:813|Hs108|chr7 (224 aa)
initn: 1469 init1: 1469 opt: 1470 Z-score: 1494.9 bits: 284.3 E(32554): 6e-77
Smith-Waterman score: 1470; 96.4% identity (97.8% similar) in 223 aa overlap (1-223:1-223)
10 20 30 40 50 60
pF1KE0 MDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYGHDAFLGAEEAKT
::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
CCDS56 MDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYDHDAFLGAEEAKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQWKGHDLNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 FDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQWKGHDLNE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DGLVSWEEYKNATYGYVLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIATKEEFTAFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 DGLVSWEEYKNATYGYVLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIATKEEFTAFL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 HPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKTEREQFVEF
::::::::::::::::::::::::::::::::::: . . :.
CCDS56 HPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGWQAYQGGDR
190 200 210 220
250 260 270 280 290 300
pF1KE0 RDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGS
>>CCDS7876.1 RCN1 gene_id:5954|Hs108|chr11 (331 aa)
initn: 1323 init1: 788 opt: 1318 Z-score: 1339.6 bits: 256.1 E(32554): 2.7e-68
Smith-Waterman score: 1318; 60.8% identity (83.5% similar) in 316 aa overlap (6-315:16-331)
10 20 30 40
pF1KE0 MDLRQFLMCLSLCTAFALSKPTEKKDRV-HHEPQLSDKVHNDAQSFDYGH
.:. : : .::: .:.:: . . .:... .: :::.: :
CCDS78 MARGGRGRRLGLALGLLLALVLAPRVLRAKPTVRKERVVRPDSELGERPPEDNQSFQYDH
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE0 DAFLGAEEAKTFDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDV
.:::: :..::::::::.::::::::::..::.: :::::..::: ::: .:::.:...:
CCDS78 EAFLGKEDSKTFDQLTPDESKERLGKIVDRIDNDGDGFVTTEELKTWIKRVQKRYIFDNV
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE0 ERQWKGHDLNEDGLVSWEEYKNATYGYVLDDP----DPDDGFNYKQMMVRDERRFKMADK
. :: .: ..: .::::::.::::: : .: : .: ..:.:. ::::::: ::
CCDS78 AKVWKDYDRDKDDKISWEEYKQATYGYYLGNPAEFHDSSDHHTFKKMLPRDERRFKAADL
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE0 DGDLIATKEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTD
.::: ::.:::::::::::...::.::: ::.::::::.:::.: .:::.::.::. :
CCDS78 NGDLTATREEFTAFLHPEEFEHMKEIVVLETLEDIDKNGDGFVDQDEYIADMFSHEENGP
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE0 EPEWVKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKL
::.:: .::::: :::: :.:::.::.: . ::::.:::::.:::::::::::.::: ::
CCDS78 EPDWVLSEREQFNEFRDLNKDGKLDKDEIRHWILPQDYDHAQAEARHLVYESDKNKDEKL
250 260 270 280 290 300
290 300 310
pF1KE0 TKEEIVDKYDLFVGSQATDFGEALVR-HDEF
:::::......:::::::..:: :.. :::.
CCDS78 TKEEILENWNMFVGSQATNYGEDLTKNHDEL
310 320 330
>>CCDS12771.1 RCN3 gene_id:57333|Hs108|chr19 (328 aa)
initn: 986 init1: 698 opt: 1089 Z-score: 1109.0 bits: 213.4 E(32554): 1.9e-55
Smith-Waterman score: 1092; 50.5% identity (75.7% similar) in 321 aa overlap (7-315:8-328)
10 20 30 40 50
pF1KE0 MDLRQFLMCLSLCTAFALSKPTEK-----KDRVHHEPQLSDKVHNDAQ-SFDYGHDAFL
:. : : : .::. . :::. ::: :.::. .:.: :.:::
CCDS12 MMWRPSVLLLLLLLRHGAQGKPSPDAGPHGQGRVHQAAPLSDAPHDDAHGNFQYDHEAFL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 GAEEAKTFDQLTPEESKERLGKIVSKID--GDKDGFVTVDELKDWIKFAQKRWIYEDVER
: : :: :::::::::. :::.::...: :: ::.:.. ::. :: .:.: : ..:
CCDS12 GREVAKEFDQLTPEESQARLGRIVDRMDRAGDGDGWVSLAELRAWIAHTQQRHIRDSVSA
70 80 90 100 110 120
120 130 140 150 160
pF1KE0 QWKGHDLNEDGLVSWEEYKNATYGYVLDDP---DPDDGFNYKQMMVRDERRFKMADKDGD
: .: ..:: :.::: .:::::. : .:. .::.:..::::::..::.:::
CCDS12 AWDTYDTDRDGRVGWEELRNATYGHYAPGEEFHDVEDAETYKKMLARDERRFRVADQDGD
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE0 LIATKEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPE
.::.::.::::::::. .:.:::. ::.::.:.: ::....::::.:.:: . . .::
CCDS12 SMATREELTAFLHPEEFPHMRDIVIAETLEDLDRNKDGYVQVEEYIADLYSAEPGEEEPA
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE0 WVKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKE
::.:::.:: .::: :.::..: :. :.:: :. .:: ::..::: .:::.:.:
CCDS12 WVQTERQQFRDFRDLNKDGHLDGSEVGHWVLPPAQDQPLVEANHLLHESDTDKDGRLSKA
250 260 270 280 290 300
290 300 310
pF1KE0 EIVDKYDLFVGSQATDFGEALVRH-DEF
::. ....:::::::..:: :.:: ::.
CCDS12 EILGNWNMFVGSQATNYGEDLTRHHDEL
310 320
>>CCDS10291.1 RCN2 gene_id:5955|Hs108|chr15 (317 aa)
initn: 695 init1: 482 opt: 735 Z-score: 752.7 bits: 147.5 E(32554): 1.3e-35
Smith-Waterman score: 735; 40.8% identity (74.0% similar) in 277 aa overlap (46-315:38-311)
20 30 40 50 60 70
pF1KE0 FALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYGHDAFLGAEE-AKTFDQLTPEESKERLG
:: ..:.::..: . . .: ::...::
CCDS10 AALGLLLLCAAAAGAGKAEELHYPLGERRSDYDREALLGVQEDVDEYVKLGHEEQQKRLQ
10 20 30 40 50 60
80 90 100 110 120 130
pF1KE0 KIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQWKGHDLNEDGLVSWEEYKNATY
:..::: :.:::.: .::..::... :.. ......:. .: : : :.:.::. :
CCDS10 AIIKKIDLDSDGFLTESELSSWIQMSFKHYAMQEAKQQFVEYDKNSDDTVTWDEYNIQMY
70 80 90 100 110 120
140 150 160 170 180
pF1KE0 GYVLD-DPDP--DDGF--NYKQMMVRDERRFKMADKDGDLIATKEEFTAFLHPEEYDYMK
:.: : . ::. ..... ..:..::. :..:. . ::: :: :::: :::
CCDS10 DRVIDFDENTALDDAEEESFRKLHLKDKKRFEKANQDSGPGLSLEEFIAFEHPEEVDYMT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 DIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDE-PEWVKTEREQFVEFRDKNRDGK
..:.::..:. :::.:::..:::..:: : : ...: :::. .:...::. ::. ::.
CCDS10 EFVIQEALEEHDKNGDGFVSLEEFLGD-YRWDPTANEDPEWILVEKDRFVNDYDKDNDGR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 MDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEA
.: .: :..:.. :. :: ::. : : : : ::..:::... :::. :.:::.:.
CCDS10 LDPQELLPWVVPNNQGIAQEEALHLIDEMDLNGDKKLSEEEILENPDLFLTSEATDYGRQ
250 260 270 280 290 300
310
pF1KE0 LVRHDEF
: ::..
CCDS10 L--HDDYFYHDEL
310
>>CCDS61719.1 RCN2 gene_id:5955|Hs108|chr15 (335 aa)
initn: 695 init1: 482 opt: 510 Z-score: 525.7 bits: 105.5 E(32554): 5.8e-23
Smith-Waterman score: 694; 38.6% identity (68.8% similar) in 295 aa overlap (46-315:38-329)
20 30 40 50 60 70
pF1KE0 FALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYGHDAFLGAEE-AKTFDQLTPEESKERLG
:: ..:.::..: . . .: ::...::
CCDS61 AALGLLLLCAAAAGAGKAEELHYPLGERRSDYDREALLGVQEDVDEYVKLGHEEQQKRLQ
10 20 30 40 50 60
80 90 100 110 120 130
pF1KE0 KIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQWKGHDLNEDGLVSWEEYKNATY
:..::: :.:::.: .::..::... :.. ......:. .: : : :.:.::. :
CCDS61 AIIKKIDLDSDGFLTESELSSWIQMSFKHYAMQEAKQQFVEYDKNSDDTVTWDEYNIQMY
70 80 90 100 110 120
140 150 160 170
pF1KE0 GYVLD-------DPDPDDGFNY------KQ----------MMVRDERRFKMADKDGDLIA
:.: : ...: :: . ..:..::. :..:.
CCDS61 DRVIDFDENTALDDAEEESFRKEFAICKKQSFCFWLLRFNLHLKDKKRFEKANQDSGPGL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 TKEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDE-PEWV
. ::: :: :::: ::: ..:.::..:. :::.:::..:::..:: : : ...: :::.
CCDS61 SLEEFIAFEHPEEVDYMTEFVIQEALEEHDKNGDGFVSLEEFLGD-YRWDPTANEDPEWI
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE0 KTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEI
.:...::. ::. ::..: .: :..:.. :. :: ::. : : : : ::..:::
CCDS61 LVEKDRFVNDYDKDNDGRLDPQELLPWVVPNNQGIAQEEALHLIDEMDLNGDKKLSEEEI
250 260 270 280 290 300
300 310
pF1KE0 VDKYDLFVGSQATDFGEALVRHDEF
... :::. :.:::.:. : ::..
CCDS61 LENPDLFLTSEATDYGRQL--HDDYFYHDEL
310 320 330
>>CCDS30553.1 SDF4 gene_id:51150|Hs108|chr1 (362 aa)
initn: 340 init1: 191 opt: 316 Z-score: 329.9 bits: 69.4 E(32554): 4.7e-12
Smith-Waterman score: 427; 28.9% identity (65.3% similar) in 291 aa overlap (47-315:77-362)
20 30 40 50 60 70
pF1KE0 ALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYGHDAFLGAEEAKTFDQ-LTPEESKERLGK
. ...::: .. ::. :..:...:
CCDS30 RVANREENEILPPDHLNGVKLEMDGHLNRGFHQEVFLG-KDLGGFDEDAEPRRSRRKLMV
50 60 70 80 90 100
80 90 100 110 120 130
pF1KE0 IVSKIDGDKDGFVTVDELKDWI--KFAQK-RWIYEDVERQWKGHDLNEDGLVSWEEYKN-
: ::.: . : ... :.. :: : :.. . .:. . .... : . :: :::.:::
CCDS30 IFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVK
110 120 130 140 150 160
140 150 160 170
pF1KE0 --ATYGYVLDDPDPDDGFNYKQMMVRDER----------RFKMADKD-GDLIATKEEFTA
:. :. .. . :.. .. . ::. :. .::. .::. :.::: .
CCDS30 FLASKGH--SEKEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLS
170 180 190 200 210 220
180 190 200 210 220 230
pF1KE0 FLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYI----GDMYSHDGNTDEPEWVKTER
:::::. : ..:.: ..:.:...: ... :.: : . ...:. . .::: ..
CCDS30 FLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRK
230 240 250 260 270 280
240 250 260 270 280 290
pF1KE0 EQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKY
..: :. :.:.:: . :: .... : . .: ::.... .:.:.. .: ::..
CCDS30 KEFEELIDSNHDGIVTAEELESYMDPMNEYNALNEAKQMIAVADENQNHHLEPEEVLKYS
290 300 310 320 330 340
300 310
pF1KE0 DLFVGSQATDFGEALVRHDEF
..:.::. .:..... :.::
CCDS30 EFFTGSKLVDYARSV--HEEF
350 360
315 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 05:15:21 2016 done: Thu Nov 3 05:15:21 2016
Total Scan time: 2.250 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]