Result of FASTA (omim) for
pF1KE0461
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0461, 215 aa
1>>>pF1KE0461 215 - 215 aa - 215 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1270+/-0.000392; mu= 15.4543+/- 0.025
mean_var=87.9283+/-17.264, 0's: 0 Z-trim(114.8): 435 B-trim: 1696 in 2/52
Lambda= 0.136776
statistics sampled from 24369 (24879) to 24369 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.672), E-opt: 0.2 (0.292), width: 16
Scan time: 6.100
The best scores are: opt bits E(85289)
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 1422 290.2 1.7e-78
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218) 835 174.4 1.3e-43
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 825 172.4 4.9e-43
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213) 821 171.6 8.5e-43
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216) 803 168.1 1e-41
NP_001229573 (OMIM: 179509) ras-related protein Ra ( 188) 665 140.8 1.4e-33
NP_001156852 (OMIM: 607466) ras-related protein Ra ( 170) 601 128.1 8.5e-30
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216) 601 128.2 1e-29
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218) 590 126.1 4.5e-29
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 575 123.1 3.4e-28
NP_065120 (OMIM: 612942) ras-related protein Rab-2 ( 213) 562 120.5 2.1e-27
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 555 119.1 5.2e-27
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 553 118.7 6.8e-27
NP_741995 (OMIM: 300774) ras-related protein Rab-3 ( 213) 550 118.1 1.1e-26
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 539 116.0 4.7e-26
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 527 113.6 2.4e-25
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215) 526 113.4 2.8e-25
XP_016877199 (OMIM: 607466) PREDICTED: ras-related ( 171) 523 112.7 3.6e-25
NP_001193765 (OMIM: 605570) ras-related protein Ra ( 155) 522 112.5 3.9e-25
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216) 522 112.6 4.9e-25
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223) 521 112.4 5.8e-25
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203) 520 112.2 6.2e-25
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203) 520 112.2 6.2e-25
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203) 520 112.2 6.2e-25
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203) 520 112.2 6.2e-25
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196) 518 111.8 8e-25
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228) 518 111.9 8.8e-25
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200) 517 111.6 9.3e-25
NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256) 513 110.9 1.9e-24
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220) 512 110.7 2e-24
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220) 512 110.7 2e-24
NP_067075 (OMIM: 602207,614222) ras-related protei ( 206) 509 110.0 2.8e-24
NP_001020471 (OMIM: 616448) ras-related protein Ra ( 244) 507 109.7 4.2e-24
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225) 498 107.9 1.4e-23
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227) 498 107.9 1.4e-23
NP_001294982 (OMIM: 605455) ras-related protein Ra ( 190) 494 107.0 2.1e-23
XP_016857447 (OMIM: 179510) PREDICTED: ras-related ( 219) 494 107.1 2.3e-23
NP_002858 (OMIM: 179510) ras-related protein Rab-3 ( 219) 494 107.1 2.3e-23
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 489 106.1 4.5e-23
NP_004574 (OMIM: 604037) ras-related protein Rab-5 ( 216) 479 104.1 1.8e-22
NP_958842 (OMIM: 604037) ras-related protein Rab-5 ( 216) 479 104.1 1.8e-22
XP_011523393 (OMIM: 604037) PREDICTED: ras-related ( 216) 479 104.1 1.8e-22
XP_011523392 (OMIM: 604037) PREDICTED: ras-related ( 216) 479 104.1 1.8e-22
NP_001238968 (OMIM: 604037) ras-related protein Ra ( 249) 479 104.2 2e-22
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201) 471 102.5 5e-22
NP_001238965 (OMIM: 179514) ras-related protein Ra ( 215) 471 102.6 5.3e-22
NP_002859 (OMIM: 179514) ras-related protein Rab-5 ( 215) 471 102.6 5.3e-22
XP_005269109 (OMIM: 179514) PREDICTED: ras-related ( 215) 471 102.6 5.3e-22
XP_005269108 (OMIM: 179514) PREDICTED: ras-related ( 215) 471 102.6 5.3e-22
NP_004153 (OMIM: 179512) ras-related protein Rab-5 ( 215) 468 102.0 7.9e-22
>>NP_057406 (OMIM: 612673) ras-related protein Rab-14 [H (215 aa)
initn: 1422 init1: 1422 opt: 1422 Z-score: 1530.2 bits: 290.2 E(85289): 1.7e-78
Smith-Waterman score: 1422; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KE0 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 LIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGS
130 140 150 160 170 180
190 200 210
pF1KE0 LDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC
:::::::::::::::::::::::::::::::::::
NP_057 LDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC
190 200 210
>>NP_004569 (OMIM: 179511) ras-related protein Rab-4A is (218 aa)
initn: 840 init1: 793 opt: 835 Z-score: 904.2 bits: 174.4 E(85289): 1.3e-43
Smith-Waterman score: 835; 60.8% identity (82.3% similar) in 209 aa overlap (8-215:10-218)
10 20 30 40 50
pF1KE0 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQ
:...::...::. :.::::::::: :::: : ::::::::..::.:.:.
NP_004 MSQTAMSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 KIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTV
.::::::::::::::.:::::::::::::.::::: : ::: :..:::::: :.. : :
NP_004 YVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIV
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 IILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQD
::: ::: ::.:.:.::. ::..::.:: :.:::.:: ::::::.::.. :.:: ..:..
NP_004 IILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIES
130 140 150 160 170 180
180 190 200 210
pF1KE0 GSLDLNAAESGVQHKPSAPQGGRLTSEPQ-PQREGCGC
: :: . ::.:. .: . : . : :. . :::
NP_004 GELDPERMGSGIQYGDAALRQLRSPRRAQAPNAQECGC
190 200 210
>>NP_002856 (OMIM: 179509) ras-related protein Rab-2A is (212 aa)
initn: 806 init1: 787 opt: 825 Z-score: 893.6 bits: 172.4 E(85289): 4.9e-43
Smith-Waterman score: 825; 58.9% identity (84.2% similar) in 209 aa overlap (8-215:3-211)
10 20 30 40 50 60
pF1KE0 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI
:.:.:::::::: :::::::: :::.:.:. :::::::.:.: ..:..:
NP_002 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQI
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII
::::::::::: ::..::::::::::::.:::::::.:.:::..:: :::. .: : ::.
NP_002 KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIM
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 LIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGS
:::::.:::..:.: ::.. ::.:.::.:.:.::::. :::.::...::.::..::.:
NP_002 LIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGV
120 130 140 150 160 170
190 200 210
pF1KE0 LDLNAAESGVQHKPS-APQGGRLTSEPQPQREGCGC
.:.: .:.. :. : .. ... :. : ::
NP_002 FDINNEANGIKIGPQHAATNATHAGNQGGQQAGGGCC
180 190 200 210
>>NP_057238 (OMIM: 612945) ras-related protein Rab-4B [H (213 aa)
initn: 834 init1: 788 opt: 821 Z-score: 889.4 bits: 171.6 E(85289): 8.5e-43
Smith-Waterman score: 821; 57.9% identity (81.8% similar) in 214 aa overlap (8-215:5-213)
10 20 30 40 50 60
pF1KE0 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI
:...::...::. :.::::::::: :.:: : ::::::::.:...:.:. .
NP_057 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTV
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII
::::::::::::::.:::::::::::::.::::: : ::: :..::::::.:..:: :.:
NP_057 KLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVI
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 LIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGS
: ::: ::. .:.::. ::..::.:: :.:::.:: ::::::.:::. :. : ..:..:
NP_057 LCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGE
120 130 140 150 160 170
190 200 210
pF1KE0 LDLNAAESGVQHKPSA------PQGGRLTSEPQPQREGCGC
:: . ::.:. .. :.... .. ::: :::
NP_057 LDPERMGSGIQYGDASLRQLRQPRSAQAVA-PQP----CGC
180 190 200 210
>>NP_116235 (OMIM: 607466) ras-related protein Rab-2B is (216 aa)
initn: 777 init1: 777 opt: 803 Z-score: 870.1 bits: 168.1 E(85289): 1e-41
Smith-Waterman score: 803; 56.7% identity (82.8% similar) in 215 aa overlap (8-215:3-216)
10 20 30 40 50 60
pF1KE0 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI
:.:.:::::::: :::::::: :::.:.:. :::::::.:.....:..:
NP_116 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQI
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII
::::::::::: ::..::::::::::::.::::::: :.:::.::: :::. .. : ::.
NP_116 KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIM
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 LIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGS
:::::.:::..::: ::.. ::.:.::.:.:.::::. :::.::...::.::..::.:
NP_116 LIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGL
120 130 140 150 160 170
190 200 210
pF1KE0 LDLNAAESGVQHKPS-------APQGGRLTSEPQPQREGCGC
.:.. .:.. :. .:.... .:. . :: :
NP_116 FDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGC-C
180 190 200 210
>>NP_001229573 (OMIM: 179509) ras-related protein Rab-2A (188 aa)
initn: 735 init1: 646 opt: 665 Z-score: 723.7 bits: 140.8 E(85289): 1.4e-33
Smith-Waterman score: 678; 51.7% identity (75.6% similar) in 209 aa overlap (8-215:3-187)
10 20 30 40 50 60
pF1KE0 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI
:.:.:::::::: :: :::.:.: ..:..:
NP_001 MAYAYLFKYIIIGDTGV------------------------EFGARMITIDGKQI
10 20 30
70 80 90 100 110 120
pF1KE0 KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII
::::::::::: ::..::::::::::::.:::::::.:.:::..:: :::. .: : ::.
NP_001 KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIM
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE0 LIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGS
:::::.:::..:.: ::.. ::.:.::.:.:.::::. :::.::...::.::..::.:
NP_001 LIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGV
100 110 120 130 140 150
190 200 210
pF1KE0 LDLNAAESGVQHKPS-APQGGRLTSEPQPQREGCGC
.:.: .:.. :. : .. ... :. : ::
NP_001 FDINNEANGIKIGPQHAATNATHAGNQGGQQAGGGCC
160 170 180
>>NP_001156852 (OMIM: 607466) ras-related protein Rab-2B (170 aa)
initn: 572 init1: 572 opt: 601 Z-score: 656.0 bits: 128.1 E(85289): 8.5e-30
Smith-Waterman score: 601; 53.2% identity (82.5% similar) in 171 aa overlap (52-215:1-170)
30 40 50 60 70 80
pF1KE0 VGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYY
.....:..:::::::::::: ::..:::::
NP_001 MVNIDGKQIKLQIWDTAGQESFRSITRSYY
10 20 30
90 100 110 120 130 140
pF1KE0 RGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQ
:::::::.::::::: :.:::.::: :::. .. : ::.:::::.:::..::: ::..
NP_001 RGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEA
40 50 60 70 80 90
150 160 170 180 190
pF1KE0 FAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPS------
::.:.::.:.:.::::. :::.::...::.::..::.: .:.. .:.. :.
NP_001 FAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGIKIGPQQSISTS
100 110 120 130 140 150
200 210
pF1KE0 -APQGGRLTSEPQPQREGCGC
.:.... .:. . :: :
NP_001 VGPSASQRNSRDIGSNSGC-C
160 170
>>NP_004654 (OMIM: 605570) ras-related protein Rab-11A i (216 aa)
initn: 603 init1: 568 opt: 601 Z-score: 654.7 bits: 128.2 E(85289): 1e-29
Smith-Waterman score: 601; 45.5% identity (71.8% similar) in 213 aa overlap (1-213:1-213)
10 20 30 40 50 60
pF1KE0 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI
:.: .:.:.:: ..::: ::::: :: .::...: . ::::::.:: :.:.:. :
NP_004 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII
: ::::::::::.::.: .:::::.:::.::::... ::... :: . :. .. : ::.
NP_004 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGS
:.:::.::. : : .::. :::.::: :.:.:: . ::: :: .::. ... .
NP_004 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
130 140 150 160 170 180
190 200 210
pF1KE0 LDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC
.. .. . .: :.: .:. . :
NP_004 MSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI
190 200 210
>>NP_004209 (OMIM: 604198) ras-related protein Rab-11B [ (218 aa)
initn: 584 init1: 584 opt: 590 Z-score: 642.9 bits: 126.1 E(85289): 4.5e-29
Smith-Waterman score: 590; 50.0% identity (76.9% similar) in 186 aa overlap (1-186:1-186)
10 20 30 40 50 60
pF1KE0 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI
:.: .:.:.:: ..::: ::::: :: .::...: . ::::::.:: :.:.:. :
NP_004 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII
: ::::::::::.::.: .:::::.:::.::::... ::... :: . :. .. : ::.
NP_004 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGS
:.:::.::. : : .::. :::.:.: :.:.:: . :::.:: . .::. ... .
NP_004 LVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ
130 140 150 160 170 180
190 200 210
pF1KE0 LDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC
. ::
NP_004 IADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQNL
190 200 210
>>NP_004152 (OMIM: 179508) ras-related protein Rab-1A is (205 aa)
initn: 532 init1: 532 opt: 575 Z-score: 627.2 bits: 123.1 E(85289): 3.4e-28
Smith-Waterman score: 575; 44.6% identity (71.3% similar) in 202 aa overlap (1-200:1-202)
10 20 30 40 50 60
pF1KE0 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI
:.. .:.:.:: ..::: :::::::: .:.. . . ::::.: : ::..:. :
NP_004 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII
::::::::::::::..: :::::: : ..:::.: . ..:....:: . .. :. .
NP_004 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGS
:.::: :: ... : : ::.::. :. :::.:::.. :::..:. : .: . . :.
NP_004 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGA
130 140 150 160 170 180
190 200 210
pF1KE0 LDLNAAESGV--QHKPSAPQGGRLTSEPQPQREGCGC
.: .:.: : : .::
NP_004 TAGGAEKSNVKIQSTPVKQSGGGCC
190 200
215 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 07:08:01 2016 done: Thu Nov 3 07:08:02 2016
Total Scan time: 6.100 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]