Result of FASTA (ccds) for
pF1KE0436
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0436, 364 aa
1>>>pF1KE0436 364 - 364 aa - 364 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5501+/-0.000927; mu= 15.0064+/- 0.056
mean_var=67.5649+/-13.642, 0's: 0 Z-trim(105.2): 25 B-trim: 49 in 1/50
Lambda= 0.156032
statistics sampled from 8279 (8290) to 8279 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.632), E-opt: 0.2 (0.255), width: 16
Scan time: 2.230
The best scores are: opt bits E(32554)
CCDS34796.1 AGPAT5 gene_id:55326|Hs108|chr8 ( 364) 2447 559.9 1.2e-159
CCDS42670.1 LCLAT1 gene_id:253558|Hs108|chr2 ( 376) 387 96.2 4.9e-20
CCDS1772.1 LCLAT1 gene_id:253558|Hs108|chr2 ( 414) 387 96.2 5.3e-20
CCDS13703.1 AGPAT3 gene_id:56894|Hs108|chr21 ( 376) 307 78.2 1.3e-14
CCDS5280.1 AGPAT4 gene_id:56895|Hs108|chr6 ( 378) 261 67.8 1.7e-11
>>CCDS34796.1 AGPAT5 gene_id:55326|Hs108|chr8 (364 aa)
initn: 2447 init1: 2447 opt: 2447 Z-score: 2979.6 bits: 559.9 E(32554): 1.2e-159
Smith-Waterman score: 2447; 100.0% identity (100.0% similar) in 364 aa overlap (1-364:1-364)
10 20 30 40 50 60
pF1KE0 MLLSLVLHTYSMRYLLPSVVLLGTAPTYVLAWGVWRLLSAFLPARFYQALDDRLYCVYQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MLLSLVLHTYSMRYLLPSVVLLGTAPTYVLAWGVWRLLSAFLPARFYQALDDRLYCVYQS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 MVLFFFENYTGVQILLYGDLPKNKENIIYLANHQSTVDWIVADILAIRQNALGHVRYVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MVLFFFENYTGVQILLYGDLPKNKENIIYLANHQSTVDWIVADILAIRQNALGHVRYVLK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 EGLKWLPLYGCYFAQHGGIYVKRSAKFNEKEMRNKLQSYVDAGTPMYLVIFPEGTRYNPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 EGLKWLPLYGCYFAQHGGIYVKRSAKFNEKEMRNKLQSYVDAGTPMYLVIFPEGTRYNPE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 QTKVLSASQAFAAQRGLAVLKHVLTPRIKATHVAFDCMKNYLDAIYDVTVVYEGKDDGGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 QTKVLSASQAFAAQRGLAVLKHVLTPRIKATHVAFDCMKNYLDAIYDVTVVYEGKDDGGQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 RRESPTMTEFLCKECPKIHIHIDRIDKKDVPEEQEHMRRWLHERFEIKDKMLIEFYESPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 RRESPTMTEFLCKECPKIHIHIDRIDKKDVPEEQEHMRRWLHERFEIKDKMLIEFYESPD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 PERRKRFPGKSVNSKLSIKKTLPSMLILSGLTAGMLMTDAGRKLYVNTWIYGTLLGCLWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 PERRKRFPGKSVNSKLSIKKTLPSMLILSGLTAGMLMTDAGRKLYVNTWIYGTLLGCLWV
310 320 330 340 350 360
pF1KE0 TIKA
::::
CCDS34 TIKA
>>CCDS42670.1 LCLAT1 gene_id:253558|Hs108|chr2 (376 aa)
initn: 297 init1: 209 opt: 387 Z-score: 473.2 bits: 96.2 E(32554): 4.9e-20
Smith-Waterman score: 403; 28.5% identity (58.0% similar) in 295 aa overlap (30-312:13-294)
10 20 30 40 50
pF1KE0 MLLSLVLHTYSMRYLLPSVVLLGTAPTYVLAWGVWR----LLSAFLPARF-----YQALD
: :: . .:: ::: : :. ..
CCDS42 MVSWKGIYFILTLFWGSFFGSIFMLSPFLPLMFVNPSWYRWIN
10 20 30 40
60 70 80 90 100 110
pF1KE0 DRLYCVYQSMVLFFFENYTGVQILLYGDLPKNKENIIYLANHQSTVDWIVADILAIRQNA
.:: .. .. . ..:.. ::.... :: : . . ::.. .::. .: .
CCDS42 NRLVATWLTLPVALLETMFGVKVIITGDAFVPGERSVIIMNHRTRMDWMFLWNCLMRYSY
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE0 LGHVRYVLKEGLKWLPLYGCYFAQHGGIYVKRSAKFNEKEMRNKLQSYVDAGTPMYLVIF
: . :: .:: .: .: . . :...:. : ....... .. . : :. :.::
CCDS42 LRLEKICLKASLKGVPGFGWAMQAAAYIFIHRKWKDDKSHFEDMIDYFCDIHEPLQLLIF
110 120 130 140 150 160
180 190 200 210 220
pF1KE0 PEGTRYNPEQTKVLSASQAFAAQRGLAVLKHVLTPRIKATHVAFDCMKN--YLDAIYDVT
:::: . :..: : :.::: . :: ..:: :: . . : ... :::..:.:
CCDS42 PEGTDLT-ENSK--SRSNAFAEKNGLQKYEYVLHPRTTGFTFVVDRLREGKNLDAVHDIT
170 180 190 200 210 220
230 240 250 260 270 280
pF1KE0 VVYEGKDDGGQRRESPTMTEFLCKECPK-IHIHIDRIDKKDVPEEQEHMRRWLHERFEIK
:.: . .... .: . :. ::.:. : .: .: .. : :.:.: :
CCDS42 VAYPHNIPQSEKH-------LLQGDFPREIHFHVHRYPIDTLPTSKEDLQLWCHKRWEEK
230 240 250 260 270
290 300 310 320 330 340
pF1KE0 DKMLIEFYESPDPERRKRFPGKSVNSKLSIKKTLPSMLILSGLTAGMLMTDAGRKLYVNT
.. : ::.. :. : :.::
CCDS42 EERLRSFYQG---EKNFYFTGQSVIPPCKSELRVLVVKLLSILYWTLFSPAMCLLIYLYS
280 290 300 310 320 330
>>CCDS1772.1 LCLAT1 gene_id:253558|Hs108|chr2 (414 aa)
initn: 297 init1: 209 opt: 387 Z-score: 472.5 bits: 96.2 E(32554): 5.3e-20
Smith-Waterman score: 403; 28.5% identity (58.0% similar) in 295 aa overlap (30-312:51-332)
10 20 30 40 50
pF1KE0 MLLSLVLHTYSMRYLLPSVVLLGTAPTYVLAWGVWR----LLSAFLPARF-----YQAL
: :: . .:: ::: : :. .
CCDS17 VSSYCTYFIKQDSKSFGIMVSWKGIYFILTLFWGSFFGSIFMLSPFLPLMFVNPSWYRWI
30 40 50 60 70 80
60 70 80 90 100 110
pF1KE0 DDRLYCVYQSMVLFFFENYTGVQILLYGDLPKNKENIIYLANHQSTVDWIVADILAIRQN
..:: .. .. . ..:.. ::.... :: : . . ::.. .::. .: .
CCDS17 NNRLVATWLTLPVALLETMFGVKVIITGDAFVPGERSVIIMNHRTRMDWMFLWNCLMRYS
90 100 110 120 130 140
120 130 140 150 160 170
pF1KE0 ALGHVRYVLKEGLKWLPLYGCYFAQHGGIYVKRSAKFNEKEMRNKLQSYVDAGTPMYLVI
: . :: .:: .: .: . . :...:. : ....... .. . : :. :.:
CCDS17 YLRLEKICLKASLKGVPGFGWAMQAAAYIFIHRKWKDDKSHFEDMIDYFCDIHEPLQLLI
150 160 170 180 190 200
180 190 200 210 220
pF1KE0 FPEGTRYNPEQTKVLSASQAFAAQRGLAVLKHVLTPRIKATHVAFDCMKN--YLDAIYDV
::::: . :..: : :.::: . :: ..:: :: . . : ... :::..:.
CCDS17 FPEGTDLT-ENSK--SRSNAFAEKNGLQKYEYVLHPRTTGFTFVVDRLREGKNLDAVHDI
210 220 230 240 250
230 240 250 260 270 280
pF1KE0 TVVYEGKDDGGQRRESPTMTEFLCKECPK-IHIHIDRIDKKDVPEEQEHMRRWLHERFEI
::.: . .... .: . :. ::.:. : .: .: .. : :.:.:
CCDS17 TVAYPHNIPQSEKH-------LLQGDFPREIHFHVHRYPIDTLPTSKEDLQLWCHKRWEE
260 270 280 290 300 310
290 300 310 320 330 340
pF1KE0 KDKMLIEFYESPDPERRKRFPGKSVNSKLSIKKTLPSMLILSGLTAGMLMTDAGRKLYVN
:.. : ::.. :. : :.::
CCDS17 KEERLRSFYQG---EKNFYFTGQSVIPPCKSELRVLVVKLLSILYWTLFSPAMCLLIYLY
320 330 340 350 360
>>CCDS13703.1 AGPAT3 gene_id:56894|Hs108|chr21 (376 aa)
initn: 265 init1: 128 opt: 307 Z-score: 375.9 bits: 78.2 E(32554): 1.3e-14
Smith-Waterman score: 314; 25.4% identity (58.5% similar) in 272 aa overlap (45-310:44-297)
20 30 40 50 60 70
pF1KE0 LLPSVVLLGTAPTYVLAWGVWRLLSAFLPARFYQALDDRLYCVYQSMVLFFFENYTGVQI
..:. :. :: :......: .. ..
CCDS13 HLLVGFVFVVSGLVINFVQLCTLALWPVSKQLYRRLNCRLAYSLWSQLVMLLEWWSCTEC
20 30 40 50 60 70
80 90 100 110 120 130
pF1KE0 LLYGDLPK----NKENIIYLANHQSTVDWIVADILAIRQNALGHVRYVLKEGLKWLPLYG
:. : .::. . . ::. .:.. . . : ..:: . . :. : ..:: :
CCDS13 TLFTDQATVERFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKKELLYVPLIG
80 90 100 110 120 130
140 150 160 170 180
pF1KE0 C--YFAQHGGIYVKRSAKFNEKEMRNKLQSYVDAGTPMYLVIFPEGTRYNPEQTKVLSAS
:: . .. ::. . .. . . :. : :..... ::::.. . .: :
CCDS13 WTWYFLEI--VFCKRKWEEDRDTVVEGLRRLSDYPEYMWFLLYCEGTRFTETKHRV---S
140 150 160 170 180
190 200 210 220 230 240
pF1KE0 QAFAAQRGLAVLKHVLTPRIKATHVAFDCMKNYLDAIYDVTVVYEGKDDGGQRRESPTMT
. :: .:: :::. : :: :. .: :... . :.::::. ..:. ..:..
CCDS13 MEVAAAKGLPVLKYHLLPRTKGFTTAVKCLRGTVAAVYDVTLNFRGN-------KNPSLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 EFLCKECPKIHIHIDRIDKKDVPEEQEHMRRWLHERFEIKDKMLIEFYESPDPERRKRFP
.: . . . . :. .:.: .... .:::. .. :: : :.: ... ::
CCDS13 GILYGKKYEADMCVRRFPLEDIPLDEKEAAQWLHKLYQEKDA-LQEIY-----NQKGMFP
250 260 270 280 290
310 320 330 340 350 360
pF1KE0 GKSVNSKLSIKKTLPSMLILSGLTAGMLMTDAGRKLYVNTWIYGTLLGCLWVTIKA
:.
CCDS13 GEQFKPARRPWTLLNFLSWATILLSPLFSFVLGVFASGSPLLILTFLGFVGAASFGVRRL
300 310 320 330 340 350
>>CCDS5280.1 AGPAT4 gene_id:56895|Hs108|chr6 (378 aa)
initn: 221 init1: 131 opt: 261 Z-score: 319.9 bits: 67.8 E(32554): 1.7e-11
Smith-Waterman score: 350; 25.0% identity (58.6% similar) in 324 aa overlap (1-313:1-310)
10 20 30 40 50
pF1KE0 MLLSLVLHTYSMRYLLPSVVLLGTAPTYVLAWGVWRLLSAFLPARFYQALDDRL-YCVYQ
: :. .:.. . .:. :..... . . .. :: . .... .. :: ::. .
CCDS52 MDLAGLLKSQFLCHLVFCYVFIASG-LIINTIQLFTLLLWPINKQLFRKINCRLSYCISS
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 SMVLFFFENYTGVQILLYGD----LPKNKENIIYLANHQSTVDWIVADILAIRQNALGHV
..:... : ..:.. .. : : .::: : . ::. .:.. . :. : . ::
CCDS52 QLVMLL-EWWSGTECTIFTDPRAYLKYGKENAIVVLNHKFEIDFLCGWSLSERFGLLGGS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 RYVLKEGLKWLPLYGC--YFAQHGGIYVKRSAKFNEKEMRNKLQSYVDAGTPMYLVIFPE
. . :. : ..:. : ::.. .. .:. . ..: . ..:: : ....: :
CCDS52 KVLAKKELAYVPIIGWMWYFTEM--VFCSRKWEQDRKTVATSLQHLRDYPEKYFFLIHCE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 GTRYNPEQTKVLSASQAFAAQRGLAVLKHVLTPRIKATHVAFDCMKNYLDAIYDVTVVYE
:::.. .. .. :. : .:: ::: : :: :. .. ..: ..:.:: :. ..
CCDS52 GTRFTEKKHEI---SMQVARAKGLPRLKHHLLPRTKGFAITVRSLRNVVSAVYDCTLNFR
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE0 GKDDGGQRRESPTMTEFLCKECPKIHIHIDRIDKKDVPEEQEHMRRWLHERFEIKDKMLI
.. :.::. : . . ... :: .:.::.... :::. .. :: .
CCDS52 NN-------ENPTLLGVLNGKKYHADLYVRRIPLEDIPEDDDECSAWLHKLYQEKDAFQE
240 250 260 270 280
300 310 320 330 340
pF1KE0 EFYES---PD-PERRKRFPGKSVNSKLSIKKTLPSMLILSGLTAGMLMTDAGRKLYVNTW
:.:.. :. : : : ::
CCDS52 EYYRTGTFPETPMVPPRRPWTLVNWLFWASLVLYPFFQFLVSMIRSGSSLTLASFILVFF
290 300 310 320 330 340
364 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 09:06:14 2016 done: Thu Nov 3 09:06:14 2016
Total Scan time: 2.230 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]