Result of FASTA (omim) for
pF1KE0414
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0414, 186 aa
1>>>pF1KE0414 186 - 186 aa - 186 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2144+/-0.000319; mu= 13.0684+/- 0.020
mean_var=57.2536+/-11.162, 0's: 0 Z-trim(115.1): 26 B-trim: 22 in 1/56
Lambda= 0.169501
statistics sampled from 25319 (25345) to 25319 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.692), E-opt: 0.2 (0.297), width: 16
Scan time: 6.070
The best scores are: opt bits E(85289)
NP_115637 (OMIM: 612412) speriolin-like protein is ( 186) 1215 304.9 4.8e-83
XP_005261245 (OMIM: 612412) PREDICTED: speriolin-l ( 340) 1215 305.0 8.2e-83
XP_016883969 (OMIM: 612412) PREDICTED: speriolin-l ( 340) 1215 305.0 8.2e-83
NP_001136326 (OMIM: 612412) speriolin-like protein ( 340) 1215 305.0 8.2e-83
XP_011528058 (OMIM: 612412) PREDICTED: speriolin-l ( 226) 1041 262.4 3.7e-70
NP_940974 (OMIM: 610874) speriolin isoform 1 [Homo ( 591) 515 133.9 4.5e-31
XP_011515324 (OMIM: 610874) PREDICTED: speriolin i ( 620) 322 86.7 7.6e-17
XP_011515323 (OMIM: 610874) PREDICTED: speriolin i ( 626) 322 86.7 7.6e-17
XP_011515326 (OMIM: 610874) PREDICTED: speriolin i ( 535) 208 58.8 1.6e-08
XP_016868888 (OMIM: 610874) PREDICTED: speriolin i ( 535) 208 58.8 1.6e-08
XP_011515327 (OMIM: 610874) PREDICTED: speriolin i ( 535) 208 58.8 1.6e-08
XP_011515325 (OMIM: 610874) PREDICTED: speriolin i ( 564) 208 58.9 1.7e-08
>>NP_115637 (OMIM: 612412) speriolin-like protein isofor (186 aa)
initn: 1215 init1: 1215 opt: 1215 Z-score: 1611.9 bits: 304.9 E(85289): 4.8e-83
Smith-Waterman score: 1215; 100.0% identity (100.0% similar) in 186 aa overlap (1-186:1-186)
10 20 30 40 50 60
pF1KE0 MVRPKKVCFSESSLPTGDRTRRSYYLNEIQSFAGAEKDARVVGEIAFQLDRRILAYVFPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 MVRPKKVCFSESSLPTGDRTRRSYYLNEIQSFAGAEKDARVVGEIAFQLDRRILAYVFPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 VTRLYGFTVANIPEKIEQTSTKSLDGSVDERKLRELTQRYLALSARLEKLGYSRDVHPAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 VTRLYGFTVANIPEKIEQTSTKSLDGSVDERKLRELTQRYLALSARLEKLGYSRDVHPAF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 SEFLINTYGILKQRPDLRANPLHSSPAALRKLVIDVVPPKFLGDSLLLLNCLCELSKEDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 SEFLINTYGILKQRPDLRANPLHSSPAALRKLVIDVVPPKFLGDSLLLLNCLCELSKEDG
130 140 150 160 170 180
pF1KE0 KPLFAW
::::::
NP_115 KPLFAW
>>XP_005261245 (OMIM: 612412) PREDICTED: speriolin-like (340 aa)
initn: 1215 init1: 1215 opt: 1215 Z-score: 1607.8 bits: 305.0 E(85289): 8.2e-83
Smith-Waterman score: 1215; 100.0% identity (100.0% similar) in 186 aa overlap (1-186:155-340)
10 20 30
pF1KE0 MVRPKKVCFSESSLPTGDRTRRSYYLNEIQ
::::::::::::::::::::::::::::::
XP_005 SHRGTDRKLSPLLSPLQDSLVDKTLLEPREMVRPKKVCFSESSLPTGDRTRRSYYLNEIQ
130 140 150 160 170 180
40 50 60 70 80 90
pF1KE0 SFAGAEKDARVVGEIAFQLDRRILAYVFPGVTRLYGFTVANIPEKIEQTSTKSLDGSVDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SFAGAEKDARVVGEIAFQLDRRILAYVFPGVTRLYGFTVANIPEKIEQTSTKSLDGSVDE
190 200 210 220 230 240
100 110 120 130 140 150
pF1KE0 RKLRELTQRYLALSARLEKLGYSRDVHPAFSEFLINTYGILKQRPDLRANPLHSSPAALR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RKLRELTQRYLALSARLEKLGYSRDVHPAFSEFLINTYGILKQRPDLRANPLHSSPAALR
250 260 270 280 290 300
160 170 180
pF1KE0 KLVIDVVPPKFLGDSLLLLNCLCELSKEDGKPLFAW
::::::::::::::::::::::::::::::::::::
XP_005 KLVIDVVPPKFLGDSLLLLNCLCELSKEDGKPLFAW
310 320 330 340
>>XP_016883969 (OMIM: 612412) PREDICTED: speriolin-like (340 aa)
initn: 1215 init1: 1215 opt: 1215 Z-score: 1607.8 bits: 305.0 E(85289): 8.2e-83
Smith-Waterman score: 1215; 100.0% identity (100.0% similar) in 186 aa overlap (1-186:155-340)
10 20 30
pF1KE0 MVRPKKVCFSESSLPTGDRTRRSYYLNEIQ
::::::::::::::::::::::::::::::
XP_016 SHRGTDRKLSPLLSPLQDSLVDKTLLEPREMVRPKKVCFSESSLPTGDRTRRSYYLNEIQ
130 140 150 160 170 180
40 50 60 70 80 90
pF1KE0 SFAGAEKDARVVGEIAFQLDRRILAYVFPGVTRLYGFTVANIPEKIEQTSTKSLDGSVDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SFAGAEKDARVVGEIAFQLDRRILAYVFPGVTRLYGFTVANIPEKIEQTSTKSLDGSVDE
190 200 210 220 230 240
100 110 120 130 140 150
pF1KE0 RKLRELTQRYLALSARLEKLGYSRDVHPAFSEFLINTYGILKQRPDLRANPLHSSPAALR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RKLRELTQRYLALSARLEKLGYSRDVHPAFSEFLINTYGILKQRPDLRANPLHSSPAALR
250 260 270 280 290 300
160 170 180
pF1KE0 KLVIDVVPPKFLGDSLLLLNCLCELSKEDGKPLFAW
::::::::::::::::::::::::::::::::::::
XP_016 KLVIDVVPPKFLGDSLLLLNCLCELSKEDGKPLFAW
310 320 330 340
>>NP_001136326 (OMIM: 612412) speriolin-like protein iso (340 aa)
initn: 1215 init1: 1215 opt: 1215 Z-score: 1607.8 bits: 305.0 E(85289): 8.2e-83
Smith-Waterman score: 1215; 100.0% identity (100.0% similar) in 186 aa overlap (1-186:155-340)
10 20 30
pF1KE0 MVRPKKVCFSESSLPTGDRTRRSYYLNEIQ
::::::::::::::::::::::::::::::
NP_001 SHRGTDRKLSPLLSPLQDSLVDKTLLEPREMVRPKKVCFSESSLPTGDRTRRSYYLNEIQ
130 140 150 160 170 180
40 50 60 70 80 90
pF1KE0 SFAGAEKDARVVGEIAFQLDRRILAYVFPGVTRLYGFTVANIPEKIEQTSTKSLDGSVDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SFAGAEKDARVVGEIAFQLDRRILAYVFPGVTRLYGFTVANIPEKIEQTSTKSLDGSVDE
190 200 210 220 230 240
100 110 120 130 140 150
pF1KE0 RKLRELTQRYLALSARLEKLGYSRDVHPAFSEFLINTYGILKQRPDLRANPLHSSPAALR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RKLRELTQRYLALSARLEKLGYSRDVHPAFSEFLINTYGILKQRPDLRANPLHSSPAALR
250 260 270 280 290 300
160 170 180
pF1KE0 KLVIDVVPPKFLGDSLLLLNCLCELSKEDGKPLFAW
::::::::::::::::::::::::::::::::::::
NP_001 KLVIDVVPPKFLGDSLLLLNCLCELSKEDGKPLFAW
310 320 330 340
>>XP_011528058 (OMIM: 612412) PREDICTED: speriolin-like (226 aa)
initn: 1037 init1: 1037 opt: 1041 Z-score: 1380.6 bits: 262.4 E(85289): 3.7e-70
Smith-Waterman score: 1041; 95.3% identity (97.1% similar) in 171 aa overlap (16-186:57-226)
10 20 30 40
pF1KE0 MVRPKKVCFSESSLPTGDRTRRSYYLNEIQSFAGAEKDARVVGEI
:::.. :.::::::::::::::::::
XP_011 LTGGDPSQLRPPGPGSSVLAGADAGADSRVTGDQSP-PPRLKEIQSFAGAEKDARVVGEI
30 40 50 60 70 80
50 60 70 80 90 100
pF1KE0 AFQLDRRILAYVFPGVTRLYGFTVANIPEKIEQTSTKSLDGSVDERKLRELTQRYLALSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AFQLDRRILAYVFPGVTRLYGFTVANIPEKIEQTSTKSLDGSVDERKLRELTQRYLALSA
90 100 110 120 130 140
110 120 130 140 150 160
pF1KE0 RLEKLGYSRDVHPAFSEFLINTYGILKQRPDLRANPLHSSPAALRKLVIDVVPPKFLGDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLEKLGYSRDVHPAFSEFLINTYGILKQRPDLRANPLHSSPAALRKLVIDVVPPKFLGDS
150 160 170 180 190 200
170 180
pF1KE0 LLLLNCLCELSKEDGKPLFAW
:::::::::::::::::::::
XP_011 LLLLNCLCELSKEDGKPLFAW
210 220
>>NP_940974 (OMIM: 610874) speriolin isoform 1 [Homo sap (591 aa)
initn: 477 init1: 386 opt: 515 Z-score: 678.8 bits: 133.9 E(85289): 4.5e-31
Smith-Waterman score: 515; 52.7% identity (82.7% similar) in 150 aa overlap (40-186:444-591)
10 20 30 40 50 60
pF1KE0 SESSLPTGDRTRRSYYLNEIQSFAGAEKDARVVGEIAFQLDRRILAYVFPGVTRLYGFTV
:.:::::::::::::. .:: .:::::::
NP_940 SMMEVERKLAHRKTSKFPENPRESKQLAWERLVGEIAFQLDRRILSSIFPERVRLYGFTV
420 430 440 450 460 470
70 80 90 100 110 120
pF1KE0 ANIPEKIEQTSTKSLDGSVDERKLRELTQRYLALSARLEKLGYSRDVHPAFSEFLINTYG
.:::::: :.: . : ..::. ..:::::... ::..:::. ::::..: :.:.::
NP_940 SNIPEKIIQASLNPSDHKLDEKLCQRLTQRYVSVMNRLQSLGYNGRVHPALTEQLVNAYG
480 490 500 510 520 530
130 140 150 160 170 180
pF1KE0 ILKQRPDLRANPLHSSPAA---LRKLVIDVVPPKFLGDSLLLLNCLCELSKEDGKPLFAW
::..::.: :. ...: . :...:...: : .:.:.::::.:: .:...::::.: :
NP_940 ILRERPELAAS--EGGPYTVDFLQRVVVETVHPGMLADALLLLSCLSQLAHDDGKPMFIW
540 550 560 570 580 590
>>XP_011515324 (OMIM: 610874) PREDICTED: speriolin isofo (620 aa)
initn: 463 init1: 193 opt: 322 Z-score: 423.4 bits: 86.7 E(85289): 7.6e-17
Smith-Waterman score: 439; 43.8% identity (67.6% similar) in 185 aa overlap (40-186:438-620)
10 20 30 40 50 60
pF1KE0 SESSLPTGDRTRRSYYLNEIQSFAGAEKDARVVGEIAFQLDRRILAYVFPGVTRLYGFTV
:.:::::::::::::. .:: .:::::::
XP_011 SMMEVERKLAHRKTSKFPENPRESKQLAWERLVGEIAFQLDRRILSSIFPERVRLYGFTV
410 420 430 440 450 460
70 80 90
pF1KE0 ANIPEKIEQTSTK-------SLDGS----------------------------VDERKLR
.:::::: : . ::.:: .::. .
XP_011 SNIPEKIIQLCLSVDCRPVCSLSGSYCELRGSRLELCLWLKHPWASLNPSDHKLDEKLCQ
470 480 490 500 510 520
100 110 120 130 140 150
pF1KE0 ELTQRYLALSARLEKLGYSRDVHPAFSEFLINTYGILKQRPDLRANPLHSSPAA---LRK
.:::::... ::..:::. ::::..: :.:.::::..::.: :. ...: . :..
XP_011 RLTQRYVSVMNRLQSLGYNGRVHPALTEQLVNAYGILRERPELAAS--EGGPYTVDFLQR
530 540 550 560 570 580
160 170 180
pF1KE0 LVIDVVPPKFLGDSLLLLNCLCELSKEDGKPLFAW
.:...: : .:.:.::::.:: .:...::::.: :
XP_011 VVVETVHPGMLADALLLLSCLSQLAHDDGKPMFIW
590 600 610 620
>>XP_011515323 (OMIM: 610874) PREDICTED: speriolin isofo (626 aa)
initn: 463 init1: 193 opt: 322 Z-score: 423.4 bits: 86.7 E(85289): 7.6e-17
Smith-Waterman score: 439; 43.8% identity (67.6% similar) in 185 aa overlap (40-186:444-626)
10 20 30 40 50 60
pF1KE0 SESSLPTGDRTRRSYYLNEIQSFAGAEKDARVVGEIAFQLDRRILAYVFPGVTRLYGFTV
:.:::::::::::::. .:: .:::::::
XP_011 SMMEVERKLAHRKTSKFPENPRESKQLAWERLVGEIAFQLDRRILSSIFPERVRLYGFTV
420 430 440 450 460 470
70 80 90
pF1KE0 ANIPEKIEQTSTK-------SLDGS----------------------------VDERKLR
.:::::: : . ::.:: .::. .
XP_011 SNIPEKIIQLCLSVDCRPVCSLSGSYCELRGSRLELCLWLKHPWASLNPSDHKLDEKLCQ
480 490 500 510 520 530
100 110 120 130 140 150
pF1KE0 ELTQRYLALSARLEKLGYSRDVHPAFSEFLINTYGILKQRPDLRANPLHSSPAA---LRK
.:::::... ::..:::. ::::..: :.:.::::..::.: :. ...: . :..
XP_011 RLTQRYVSVMNRLQSLGYNGRVHPALTEQLVNAYGILRERPELAAS--EGGPYTVDFLQR
540 550 560 570 580 590
160 170 180
pF1KE0 LVIDVVPPKFLGDSLLLLNCLCELSKEDGKPLFAW
.:...: : .:.:.::::.:: .:...::::.: :
XP_011 VVVETVHPGMLADALLLLSCLSQLAHDDGKPMFIW
600 610 620
>>XP_011515326 (OMIM: 610874) PREDICTED: speriolin isofo (535 aa)
initn: 463 init1: 193 opt: 208 Z-score: 273.8 bits: 58.8 E(85289): 1.6e-08
Smith-Waterman score: 414; 43.6% identity (67.4% similar) in 181 aa overlap (40-182:353-531)
10 20 30 40 50 60
pF1KE0 SESSLPTGDRTRRSYYLNEIQSFAGAEKDARVVGEIAFQLDRRILAYVFPGVTRLYGFTV
:.:::::::::::::. .:: .:::::::
XP_011 SMMEVERKLAHRKTSKFPENPRESKQLAWERLVGEIAFQLDRRILSSIFPERVRLYGFTV
330 340 350 360 370 380
70 80 90
pF1KE0 ANIPEKIEQTSTK-------SLDGS----------------------------VDERKLR
.:::::: : . ::.:: .::. .
XP_011 SNIPEKIIQLCLSVDCRPVCSLSGSYCELRGSRLELCLWLKHPWASLNPSDHKLDEKLCQ
390 400 410 420 430 440
100 110 120 130 140 150
pF1KE0 ELTQRYLALSARLEKLGYSRDVHPAFSEFLINTYGILKQRPDLRANPLHSSPAA---LRK
.:::::... ::..:::. ::::..: :.:.::::..::.: :. ...: . :..
XP_011 RLTQRYVSVMNRLQSLGYNGRVHPALTEQLVNAYGILRERPELAAS--EGGPYTVDFLQR
450 460 470 480 490 500
160 170 180
pF1KE0 LVIDVVPPKFLGDSLLLLNCLCELSKEDGKPLFAW
.:...: : .:.:.::::.:: .:...::::
XP_011 VVVETVHPGMLADALLLLSCLSQLAHDDGKPMFIW
510 520 530
>>XP_016868888 (OMIM: 610874) PREDICTED: speriolin isofo (535 aa)
initn: 463 init1: 193 opt: 208 Z-score: 273.8 bits: 58.8 E(85289): 1.6e-08
Smith-Waterman score: 414; 43.6% identity (67.4% similar) in 181 aa overlap (40-182:353-531)
10 20 30 40 50 60
pF1KE0 SESSLPTGDRTRRSYYLNEIQSFAGAEKDARVVGEIAFQLDRRILAYVFPGVTRLYGFTV
:.:::::::::::::. .:: .:::::::
XP_016 SMMEVERKLAHRKTSKFPENPRESKQLAWERLVGEIAFQLDRRILSSIFPERVRLYGFTV
330 340 350 360 370 380
70 80 90
pF1KE0 ANIPEKIEQTSTK-------SLDGS----------------------------VDERKLR
.:::::: : . ::.:: .::. .
XP_016 SNIPEKIIQLCLSVDCRPVCSLSGSYCELRGSRLELCLWLKHPWASLNPSDHKLDEKLCQ
390 400 410 420 430 440
100 110 120 130 140 150
pF1KE0 ELTQRYLALSARLEKLGYSRDVHPAFSEFLINTYGILKQRPDLRANPLHSSPAA---LRK
.:::::... ::..:::. ::::..: :.:.::::..::.: :. ...: . :..
XP_016 RLTQRYVSVMNRLQSLGYNGRVHPALTEQLVNAYGILRERPELAAS--EGGPYTVDFLQR
450 460 470 480 490 500
160 170 180
pF1KE0 LVIDVVPPKFLGDSLLLLNCLCELSKEDGKPLFAW
.:...: : .:.:.::::.:: .:...::::
XP_016 VVVETVHPGMLADALLLLSCLSQLAHDDGKPMFIW
510 520 530
186 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 11:38:32 2016 done: Thu Nov 3 11:38:33 2016
Total Scan time: 6.070 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]