Result of FASTA (omim) for
pF1KE0342
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0342, 625 aa
1>>>pF1KE0342 625 - 625 aa - 625 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0705+/-0.000293; mu= 17.7060+/- 0.019
mean_var=111.6657+/-23.941, 0's: 0 Z-trim(120.2): 48 B-trim: 2033 in 2/57
Lambda= 0.121371
statistics sampled from 34982 (35071) to 34982 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.747), E-opt: 0.2 (0.411), width: 16
Scan time: 11.280
The best scores are: opt bits E(85289)
NP_892029 (OMIM: 611151) tRNA (uracil-5-)-methyltr ( 625) 4263 757.2 3.8e-218
NP_073564 (OMIM: 611151) tRNA (uracil-5-)-methyltr ( 625) 4263 757.2 3.8e-218
NP_001244923 (OMIM: 611151) tRNA (uracil-5-)-methy ( 562) 3718 661.7 1.9e-189
NP_001317968 (OMIM: 611151) tRNA (uracil-5-)-methy ( 643) 3085 550.9 4.8e-156
XP_011528441 (OMIM: 611151) PREDICTED: tRNA (uraci ( 643) 3085 550.9 4.8e-156
XP_011528444 (OMIM: 611151) PREDICTED: tRNA (uraci ( 317) 1181 217.3 6.6e-56
XP_011528443 (OMIM: 611151) PREDICTED: tRNA (uraci ( 317) 1181 217.3 6.6e-56
>>NP_892029 (OMIM: 611151) tRNA (uracil-5-)-methyltransf (625 aa)
initn: 4263 init1: 4263 opt: 4263 Z-score: 4037.4 bits: 757.2 E(85289): 3.8e-218
Smith-Waterman score: 4263; 100.0% identity (100.0% similar) in 625 aa overlap (1-625:1-625)
10 20 30 40 50 60
pF1KE0 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDNELS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDNELS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 NVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 NVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 RAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEMLILFERVEHPNGTGVLGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 RAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEMLILFERVEHPNGTGVLGP
550 560 570 580 590 600
610 620
pF1KE0 HSPPAQPTPGPPDNTLQETGTFPSS
:::::::::::::::::::::::::
NP_892 HSPPAQPTPGPPDNTLQETGTFPSS
610 620
>>NP_073564 (OMIM: 611151) tRNA (uracil-5-)-methyltransf (625 aa)
initn: 4263 init1: 4263 opt: 4263 Z-score: 4037.4 bits: 757.2 E(85289): 3.8e-218
Smith-Waterman score: 4263; 100.0% identity (100.0% similar) in 625 aa overlap (1-625:1-625)
10 20 30 40 50 60
pF1KE0 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDNELS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDNELS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 NVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 NVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 RAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEMLILFERVEHPNGTGVLGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 RAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEMLILFERVEHPNGTGVLGP
550 560 570 580 590 600
610 620
pF1KE0 HSPPAQPTPGPPDNTLQETGTFPSS
:::::::::::::::::::::::::
NP_073 HSPPAQPTPGPPDNTLQETGTFPSS
610 620
>>NP_001244923 (OMIM: 611151) tRNA (uracil-5-)-methyltra (562 aa)
initn: 3718 init1: 3718 opt: 3718 Z-score: 3522.2 bits: 661.7 E(85289): 1.9e-189
Smith-Waterman score: 3718; 100.0% identity (100.0% similar) in 549 aa overlap (1-549:1-549)
10 20 30 40 50 60
pF1KE0 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDNELS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDNELS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 NVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 RAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEMLILFERVEHPNGTGVLGP
:::::::::
NP_001 RAAMGNFVDAPLFPPQPLQSPI
550 560
>>NP_001317968 (OMIM: 611151) tRNA (uracil-5-)-methyltra (643 aa)
initn: 3085 init1: 3085 opt: 3085 Z-score: 2922.4 bits: 550.9 E(85289): 4.8e-156
Smith-Waterman score: 4217; 97.2% identity (97.2% similar) in 643 aa overlap (1-625:1-643)
10 20 30 40 50 60
pF1KE0 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
370 380 390 400 410 420
430 440 450 460
pF1KE0 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALAR------------------KVKRVIGVEL
:::::::::::::::::::::::::::::::: ::::::::::
NP_001 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARGPMYSPPWVGRHHAFLFQKVKRVIGVEL
430 440 450 460 470 480
470 480 490 500 510 520
pF1KE0 CPEAVEDARVNAQDNELSNVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CPEAVEDARVNAQDNELSNVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVIL
490 500 510 520 530 540
530 540 550 560 570 580
pF1KE0 AIRRAKNLRRLLYVSCNPRAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AIRRAKNLRRLLYVSCNPRAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEM
550 560 570 580 590 600
590 600 610 620
pF1KE0 LILFERVEHPNGTGVLGPHSPPAQPTPGPPDNTLQETGTFPSS
:::::::::::::::::::::::::::::::::::::::::::
NP_001 LILFERVEHPNGTGVLGPHSPPAQPTPGPPDNTLQETGTFPSS
610 620 630 640
>>XP_011528441 (OMIM: 611151) PREDICTED: tRNA (uracil-5- (643 aa)
initn: 3085 init1: 3085 opt: 3085 Z-score: 2922.4 bits: 550.9 E(85289): 4.8e-156
Smith-Waterman score: 4217; 97.2% identity (97.2% similar) in 643 aa overlap (1-625:1-643)
10 20 30 40 50 60
pF1KE0 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
370 380 390 400 410 420
430 440 450 460
pF1KE0 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALAR------------------KVKRVIGVEL
:::::::::::::::::::::::::::::::: ::::::::::
XP_011 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARGPMYSPPWVGRHHAFLFQKVKRVIGVEL
430 440 450 460 470 480
470 480 490 500 510 520
pF1KE0 CPEAVEDARVNAQDNELSNVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CPEAVEDARVNAQDNELSNVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVIL
490 500 510 520 530 540
530 540 550 560 570 580
pF1KE0 AIRRAKNLRRLLYVSCNPRAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AIRRAKNLRRLLYVSCNPRAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEM
550 560 570 580 590 600
590 600 610 620
pF1KE0 LILFERVEHPNGTGVLGPHSPPAQPTPGPPDNTLQETGTFPSS
:::::::::::::::::::::::::::::::::::::::::::
XP_011 LILFERVEHPNGTGVLGPHSPPAQPTPGPPDNTLQETGTFPSS
610 620 630 640
>>XP_011528444 (OMIM: 611151) PREDICTED: tRNA (uracil-5- (317 aa)
initn: 1181 init1: 1181 opt: 1181 Z-score: 1124.7 bits: 217.3 E(85289): 6.6e-56
Smith-Waterman score: 1981; 94.3% identity (94.3% similar) in 317 aa overlap (327-625:1-317)
300 310 320 330 340 350
pF1KE0 RSTPYSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAG
::::::::::::::::::::::::::::::
XP_011 MAIAYFHPQKLSPEELAELKTSLAQHFTAG
10 20 30
360 370 380 390 400 410
pF1KE0 PGRASGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGRASGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPA
40 50 60 70 80 90
420 430 440 450
pF1KE0 AEVLYTVIQDWAQLDAGSMVLDVCCGTGTIGLALAR------------------KVKRVI
:::::::::::::::::::::::::::::::::::: ::::::
XP_011 AEVLYTVIQDWAQLDAGSMVLDVCCGTGTIGLALARGPMYSPPWVGRHHAFLFQKVKRVI
100 110 120 130 140 150
460 470 480 490 500 510
pF1KE0 GVELCPEAVEDARVNAQDNELSNVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVELCPEAVEDARVNAQDNELSNVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHS
160 170 180 190 200 210
520 530 540 550 560 570
pF1KE0 KVILAIRRAKNLRRLLYVSCNPRAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVILAIRRAKNLRRLLYVSCNPRAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTP
220 230 240 250 260 270
580 590 600 610 620
pF1KE0 HCEMLILFERVEHPNGTGVLGPHSPPAQPTPGPPDNTLQETGTFPSS
:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HCEMLILFERVEHPNGTGVLGPHSPPAQPTPGPPDNTLQETGTFPSS
280 290 300 310
>>XP_011528443 (OMIM: 611151) PREDICTED: tRNA (uracil-5- (317 aa)
initn: 1181 init1: 1181 opt: 1181 Z-score: 1124.7 bits: 217.3 E(85289): 6.6e-56
Smith-Waterman score: 1981; 94.3% identity (94.3% similar) in 317 aa overlap (327-625:1-317)
300 310 320 330 340 350
pF1KE0 RSTPYSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAG
::::::::::::::::::::::::::::::
XP_011 MAIAYFHPQKLSPEELAELKTSLAQHFTAG
10 20 30
360 370 380 390 400 410
pF1KE0 PGRASGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGRASGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPA
40 50 60 70 80 90
420 430 440 450
pF1KE0 AEVLYTVIQDWAQLDAGSMVLDVCCGTGTIGLALAR------------------KVKRVI
:::::::::::::::::::::::::::::::::::: ::::::
XP_011 AEVLYTVIQDWAQLDAGSMVLDVCCGTGTIGLALARGPMYSPPWVGRHHAFLFQKVKRVI
100 110 120 130 140 150
460 470 480 490 500 510
pF1KE0 GVELCPEAVEDARVNAQDNELSNVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVELCPEAVEDARVNAQDNELSNVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHS
160 170 180 190 200 210
520 530 540 550 560 570
pF1KE0 KVILAIRRAKNLRRLLYVSCNPRAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVILAIRRAKNLRRLLYVSCNPRAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTP
220 230 240 250 260 270
580 590 600 610 620
pF1KE0 HCEMLILFERVEHPNGTGVLGPHSPPAQPTPGPPDNTLQETGTFPSS
:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HCEMLILFERVEHPNGTGVLGPHSPPAQPTPGPPDNTLQETGTFPSS
280 290 300 310
625 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 15:05:08 2016 done: Thu Nov 3 15:05:10 2016
Total Scan time: 11.280 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]