Result of FASTA (ccds) for
pF1KE0327
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0327, 618 aa
1>>>pF1KE0327 618 - 618 aa - 618 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5044+/-0.000974; mu= 18.0171+/- 0.058
mean_var=67.3059+/-14.052, 0's: 0 Z-trim(104.0): 29 B-trim: 2 in 1/48
Lambda= 0.156332
statistics sampled from 7687 (7697) to 7687 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.596), E-opt: 0.2 (0.236), width: 16
Scan time: 3.460
The best scores are: opt bits E(32554)
CCDS73380.1 ALG9 gene_id:79796|Hs108|chr11 ( 618) 4241 965.9 0
CCDS73379.1 ALG9 gene_id:79796|Hs108|chr11 ( 611) 4166 949.0 0
CCDS41714.1 ALG9 gene_id:79796|Hs108|chr11 ( 447) 3074 702.7 2.7e-202
CCDS53709.1 ALG9 gene_id:79796|Hs108|chr11 ( 440) 2999 685.7 3.3e-197
>>CCDS73380.1 ALG9 gene_id:79796|Hs108|chr11 (618 aa)
initn: 4241 init1: 4241 opt: 4241 Z-score: 5165.6 bits: 965.9 E(32554): 0
Smith-Waterman score: 4241; 100.0% identity (100.0% similar) in 618 aa overlap (1-618:1-618)
10 20 30 40 50 60
pF1KE0 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 FFIQPHKEERFLFPVYPLICLCGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 FFIQPHKEERFLFPVYPLICLCGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVN
550 560 570 580 590 600
610
pF1KE0 YTILKPRKAKQIRKKSGG
::::::::::::::::::
CCDS73 YTILKPRKAKQIRKKSGG
610
>>CCDS73379.1 ALG9 gene_id:79796|Hs108|chr11 (611 aa)
initn: 2675 init1: 2675 opt: 4166 Z-score: 5074.2 bits: 949.0 E(32554): 0
Smith-Waterman score: 4166; 98.9% identity (98.9% similar) in 618 aa overlap (1-618:1-611)
10 20 30 40 50 60
pF1KE0 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 FFIQPHKEERFLFPVYPLICLCGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWL
::::::::::::::::::::::::::::::: ::::::::::::::::::::::
CCDS73 FFIQPHKEERFLFPVYPLICLCGAVALSALQ-------KCYHFVFQRYRLEHYTVTSNWL
370 380 390 400 410
430 440 450 460 470 480
pF1KE0 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
420 430 440 450 460 470
490 500 510 520 530 540
pF1KE0 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
480 490 500 510 520 530
550 560 570 580 590 600
pF1KE0 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVN
540 550 560 570 580 590
610
pF1KE0 YTILKPRKAKQIRKKSGG
::::::::::::::::::
CCDS73 YTILKPRKAKQIRKKSGG
600 610
>>CCDS41714.1 ALG9 gene_id:79796|Hs108|chr11 (447 aa)
initn: 3074 init1: 3074 opt: 3074 Z-score: 3745.3 bits: 702.7 E(32554): 2.7e-202
Smith-Waterman score: 3074; 100.0% identity (100.0% similar) in 447 aa overlap (172-618:1-447)
150 160 170 180 190 200
pF1KE0 LRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLSTGMFCSSSAFLPSSFCMYTTL
::::::::::::::::::::::::::::::
CCDS41 MMLAFLVLSTGMFCSSSAFLPSSFCMYTTL
10 20 30
210 220 230 240 250 260
pF1KE0 IAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFFHWSLMALIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 IAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFFHWSLMALIL
40 50 60 70 80 90
270 280 290 300 310 320
pF1KE0 FLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGTEPWYFYLINGFLNFNVAFALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 FLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGTEPWYFYLINGFLNFNVAFALA
100 110 120 130 140 150
330 340 350 360 370 380
pF1KE0 LLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFIIFFIQPHKEERFLFPVYPLICL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFIIFFIQPHKEERFLFPVYPLICL
160 170 180 190 200 210
390 400 410 420 430 440
pF1KE0 CGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWLALGTVFLFGLLSFSRSVALFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 CGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWLALGTVFLFGLLSFSRSVALFR
220 230 240 250 260 270
450 460 470 480 490 500
pF1KE0 GYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWYRFPSSFLLPDNWQLQFIPSEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWYRFPSSFLLPDNWQLQFIPSEF
280 290 300 310 320 330
510 520 530 540 550 560
pF1KE0 RGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKCHYLVDLDTMRETPREPKYSSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 RGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKCHYLVDLDTMRETPREPKYSSN
340 350 360 370 380 390
570 580 590 600 610
pF1KE0 KEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVNYTILKPRKAKQIRKKSGG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 KEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVNYTILKPRKAKQIRKKSGG
400 410 420 430 440
>>CCDS53709.1 ALG9 gene_id:79796|Hs108|chr11 (440 aa)
initn: 1527 init1: 1527 opt: 2999 Z-score: 3654.0 bits: 685.7 E(32554): 3.3e-197
Smith-Waterman score: 2999; 98.4% identity (98.4% similar) in 447 aa overlap (172-618:1-440)
150 160 170 180 190 200
pF1KE0 LRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLSTGMFCSSSAFLPSSFCMYTTL
::::::::::::::::::::::::::::::
CCDS53 MMLAFLVLSTGMFCSSSAFLPSSFCMYTTL
10 20 30
210 220 230 240 250 260
pF1KE0 IAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFFHWSLMALIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 IAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFFHWSLMALIL
40 50 60 70 80 90
270 280 290 300 310 320
pF1KE0 FLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGTEPWYFYLINGFLNFNVAFALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 FLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGTEPWYFYLINGFLNFNVAFALA
100 110 120 130 140 150
330 340 350 360 370 380
pF1KE0 LLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFIIFFIQPHKEERFLFPVYPLICL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFIIFFIQPHKEERFLFPVYPLICL
160 170 180 190 200 210
390 400 410 420 430 440
pF1KE0 CGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWLALGTVFLFGLLSFSRSVALFR
:::::::::: :::::::::::::::::::::::::::::::::::::::::::
CCDS53 CGAVALSALQ-------KCYHFVFQRYRLEHYTVTSNWLALGTVFLFGLLSFSRSVALFR
220 230 240 250 260
450 460 470 480 490 500
pF1KE0 GYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWYRFPSSFLLPDNWQLQFIPSEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 GYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWYRFPSSFLLPDNWQLQFIPSEF
270 280 290 300 310 320
510 520 530 540 550 560
pF1KE0 RGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKCHYLVDLDTMRETPREPKYSSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 RGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKCHYLVDLDTMRETPREPKYSSN
330 340 350 360 370 380
570 580 590 600 610
pF1KE0 KEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVNYTILKPRKAKQIRKKSGG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 KEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVNYTILKPRKAKQIRKKSGG
390 400 410 420 430 440
618 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 15:48:45 2016 done: Thu Nov 3 15:48:45 2016
Total Scan time: 3.460 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]