Result of FASTA (ccds) for
pF1KE0278
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0278, 211 aa
1>>>pF1KE0278 211 - 211 aa - 211 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7725+/-0.000598; mu= 13.2084+/- 0.037
mean_var=94.0298+/-18.149, 0's: 0 Z-trim(115.0): 9 B-trim: 123 in 2/50
Lambda= 0.132264
statistics sampled from 15558 (15567) to 15558 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.808), E-opt: 0.2 (0.478), width: 16
Scan time: 2.280
The best scores are: opt bits E(32554)
CCDS204.2 PLA2G2F gene_id:64600|Hs108|chr1 ( 211) 1544 303.5 6.1e-83
CCDS203.1 PLA2G2D gene_id:26279|Hs108|chr1 ( 145) 475 99.4 1.2e-21
CCDS200.1 PLA2G2E gene_id:30814|Hs108|chr1 ( 142) 422 89.3 1.3e-18
CCDS201.1 PLA2G2A gene_id:5320|Hs108|chr1 ( 144) 414 87.8 3.7e-18
CCDS202.1 PLA2G5 gene_id:5322|Hs108|chr1 ( 138) 382 81.7 2.5e-16
CCDS10555.1 PLA2G10 gene_id:8399|Hs108|chr16 ( 165) 375 80.4 7.1e-16
CCDS9195.1 PLA2G1B gene_id:5319|Hs108|chr12 ( 148) 304 66.8 7.9e-12
>>CCDS204.2 PLA2G2F gene_id:64600|Hs108|chr1 (211 aa)
initn: 1544 init1: 1544 opt: 1544 Z-score: 1602.5 bits: 303.5 E(32554): 6.1e-83
Smith-Waterman score: 1544; 100.0% identity (100.0% similar) in 211 aa overlap (1-211:1-211)
10 20 30 40 50 60
pF1KE0 MADGAKANPKGFKKKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 MADGAKANPKGFKKKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AHGSLLNLKAMVEAVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 AHGSLLNLKAMVEAVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 GCHPYVDHYDHTIENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMNQTYREEYRGFLNVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 GCHPYVDHYDHTIENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMNQTYREEYRGFLNVY
130 140 150 160 170 180
190 200 210
pF1KE0 CQGPTPNCSIYEPPPEEVTCSHQSPAPPAPP
:::::::::::::::::::::::::::::::
CCDS20 CQGPTPNCSIYEPPPEEVTCSHQSPAPPAPP
190 200 210
>>CCDS203.1 PLA2G2D gene_id:26279|Hs108|chr1 (145 aa)
initn: 452 init1: 367 opt: 475 Z-score: 502.4 bits: 99.4 E(32554): 1.2e-21
Smith-Waterman score: 475; 45.4% identity (74.5% similar) in 141 aa overlap (50-188:9-145)
20 30 40 50 60 70
pF1KE0 CFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLSTAHGSLLNLKAMVEAVTGRS
....:: . .:..:::. ::. :::.
CCDS20 MELALLCGLVVMAGVI--PIQGGILNLNKMVKQVTGKM
10 20 30
80 90 100 110 120 130
pF1KE0 AILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTIENNTEI
:::. :::.::::::::::: .::::..:::::..: ::: : :.: ... .. .:
CCDS20 PILSYWPYGCHCGLGGRGQPKDATDWCCQTHDCCYDHLKTQGCSIYKDYYRYNF-SQGNI
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE0 VCSDLNKTECDKQTCMCDKNMVLCLMNQ--TYREEYRGFLNVYCQGPTPNCSIYEPPPEE
::: . . :..: : :::....:: . ::... : . .:.: ::.:
CCDS20 HCSD-KGSWCEQQLCACDKEVAFCLKRNLDTYQKRLRFYWRPHCRGQTPGC
100 110 120 130 140
200 210
pF1KE0 VTCSHQSPAPPAPP
>>CCDS200.1 PLA2G2E gene_id:30814|Hs108|chr1 (142 aa)
initn: 413 init1: 242 opt: 422 Z-score: 447.8 bits: 89.3 E(32554): 1.3e-18
Smith-Waterman score: 422; 43.8% identity (69.5% similar) in 128 aa overlap (63-188:19-142)
40 50 60 70 80 90
pF1KE0 CPSRTSRSSLGMKKFFTVAILAGSVLSTAHGSLLNLKAMVEAVTGRSAILSFVGYGCYCG
:.:... .:.: .::.:: :.. ::::::
CCDS20 MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSA-LQYNDYGCYCG
10 20 30 40
100 110 120 130 140 150
pF1KE0 LGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTIENNTEIVCSDLNKTECDKQ
.:: : :..::::::::::: .: ::.: ...: .. .. : :. ..: :..
CCDS20 IGGSHWPVDQTDWCCHAHDCCYGRLEKLGCEPKLEKYLFSV-SERGIFCA--GRTTCQRL
50 60 70 80 90 100
160 170 180 190 200 210
pF1KE0 TCMCDKNMVLCLMNQ--TYREEYRGFLNVYCQGPTPNCSIYEPPPEEVTCSHQSPAPPAP
:: ::: .::. . :: ..: . : : :::: :
CCDS20 TCECDKRAALCFRRNLGTYNRKYAHYPNKLCTGPTPPC
110 120 130 140
pF1KE0 P
>>CCDS201.1 PLA2G2A gene_id:5320|Hs108|chr1 (144 aa)
initn: 349 init1: 296 opt: 414 Z-score: 439.5 bits: 87.8 E(32554): 3.7e-18
Smith-Waterman score: 414; 38.8% identity (67.3% similar) in 147 aa overlap (44-188:1-144)
20 30 40 50 60 70
pF1KE0 KKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLSTAHGSLLNLKAMVE
:: .. .:.. : :::.:.:.. :..
CCDS20 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIK
10 20 30
80 90 100 110 120 130
pF1KE0 AVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTI
.::. : ::. :::.::.::::.::: .: :: .:::::..: .:: : .
CCDS20 LTTGKEAALSYGFYGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYKFS-
40 50 60 70 80
140 150 160 170 180 190
pF1KE0 ENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMNQ--TYREEYRGFLNVYCQGPTPNCSIY
.....:.:. .. : .: : ::: . :. . :: ..:. . : .:.: :: :
CCDS20 NSGSRITCA--KQDSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC
90 100 110 120 130 140
200 210
pF1KE0 EPPPEEVTCSHQSPAPPAPP
>>CCDS202.1 PLA2G5 gene_id:5322|Hs108|chr1 (138 aa)
initn: 352 init1: 305 opt: 382 Z-score: 406.7 bits: 81.7 E(32554): 2.5e-16
Smith-Waterman score: 382; 37.9% identity (66.4% similar) in 140 aa overlap (44-181:1-137)
20 30 40 50 60 70
pF1KE0 KKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLSTAHGSLLNLKAMVE
:: .. .: . . . ...:.::.::.:.:
CCDS20 MKGLLPLAWFLACSVPAVQGGLLDLKSMIE
10 20 30
80 90 100 110 120 130
pF1KE0 AVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTI
:::..:. .. :::::: :::: ::: .:::: ::: :: .: ..::. .. : . .
CCDS20 KVTGKNALTNYGFYGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEKGCNIRTQSYKYRF
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE0 ENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMN--QTYREEYRGFLNVYCQGPTPNCSIY
.. ..: : . : ::...: :: ..: .:. : :. :
CCDS20 AWGV-VTCEP--GPFCHVNLCACDRKLVYCLKRNLRSYNPQYQYFPNILCS
100 110 120 130
200 210
pF1KE0 EPPPEEVTCSHQSPAPPAPP
>>CCDS10555.1 PLA2G10 gene_id:8399|Hs108|chr16 (165 aa)
initn: 310 init1: 261 opt: 375 Z-score: 398.5 bits: 80.4 E(32554): 7.1e-16
Smith-Waterman score: 375; 34.8% identity (67.4% similar) in 135 aa overlap (54-188:33-164)
30 40 50 60 70 80
pF1KE0 WRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLSTAHGSLLNLKAMVEAVTGRSAILS
:. .: . . ..:.: . : : :. : .
CCDS10 PLPVCLPIMLLLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTPI-A
10 20 30 40 50 60
90 100 110 120 130 140
pF1KE0 FVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTIENNTEIVCSD
.. :::.:::::.:::.: .:::::.::::: . . :: : ...:. :.. ..:.
CCDS10 YMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQS-VLCGP
70 80 90 100 110 120
150 160 170 180 190 200
pF1KE0 LNKTECDKQTCMCDKNMVLCLMNQTYREEYRGFLNVYCQGPTPNCSIYEPPPEEVTCSHQ
...:.. : ::.... :: . : .: . . :. .:.:
CCDS10 -AENKCQELLCKCDQEIANCLAQTEYNLKYLFYPQFLCEPDSPKCD
130 140 150 160
210
pF1KE0 SPAPPAPP
>>CCDS9195.1 PLA2G1B gene_id:5319|Hs108|chr12 (148 aa)
initn: 290 init1: 178 opt: 304 Z-score: 325.9 bits: 66.8 E(32554): 7.9e-12
Smith-Waterman score: 304; 34.2% identity (65.1% similar) in 149 aa overlap (46-182:2-147)
20 30 40 50 60 70
pF1KE0 VLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLSTAHG----SLLNLKAM
:....:.: .: .. : .. ... :
CCDS91 MKLLVLAVLL-TVAAADSGISPRAVWQFRKM
10 20 30
80 90 100 110 120
pF1KE0 VEAVT-GRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQEL--FDQGCHPYVDH
.. : : . .: . .::::::::: : : ::.: ::..:: ::.. .:. :. .:.
CCDS91 IKCVIPGSDPFLEYNNYGCYCGLGGSGTPVDELDKCCQTHDNCYDQAKKLDS-CKFLLDN
40 50 60 70 80
130 140 150 160 170 180
pF1KE0 -YDHTIE---NNTEIVCSDLNKTECDKQTCMCDKNMVLCLMNQTYREEYRGF-LNVYCQG
: :: ... :.::. :: ::. : ::.: ..:. . : . .... . :::
CCDS91 PYTHTYSYSCSGSAITCSSKNK-ECEAFICNCDRNAAICFSKAPYNKAHKNLDTKKYCQS
90 100 110 120 130 140
190 200 210
pF1KE0 PTPNCSIYEPPPEEVTCSHQSPAPPAPP
211 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 17:55:36 2016 done: Thu Nov 3 17:55:37 2016
Total Scan time: 2.280 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]