Result of FASTA (omim) for
pF1KE0236
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0236, 276 aa
1>>>pF1KE0236 276 - 276 aa - 276 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.7267+/-0.00041; mu= 17.7077+/- 0.025
mean_var=57.0361+/-11.814, 0's: 0 Z-trim(111.1): 13 B-trim: 1067 in 1/54
Lambda= 0.169824
statistics sampled from 19546 (19559) to 19546 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.604), E-opt: 0.2 (0.229), width: 16
Scan time: 6.010
The best scores are: opt bits E(85289)
XP_011516939 (OMIM: 613699) PREDICTED: glycosyltra ( 276) 1908 475.8 3.8e-134
NP_892019 (OMIM: 613699) glycosyltransferase 6 dom ( 276) 1908 475.8 3.8e-134
XP_011516940 (OMIM: 613699) PREDICTED: glycosyltra ( 244) 1327 333.4 2.5e-91
XP_011516935 (OMIM: 613699) PREDICTED: glycosyltra ( 312) 1327 333.5 3e-91
XP_011516937 (OMIM: 613699) PREDICTED: glycosyltra ( 312) 1327 333.5 3e-91
XP_011516938 (OMIM: 613699) PREDICTED: glycosyltra ( 312) 1327 333.5 3e-91
XP_011516936 (OMIM: 613699) PREDICTED: glycosyltra ( 312) 1327 333.5 3e-91
NP_068836 (OMIM: 606074) globoside alpha-1,3-N-ace ( 347) 575 149.3 9.5e-36
NP_001275501 (OMIM: 606074) globoside alpha-1,3-N- ( 300) 574 149.0 1e-35
NP_001269561 (OMIM: 606074) globoside alpha-1,3-N- ( 330) 571 148.3 1.8e-35
NP_065202 (OMIM: 110300,616093) histo-blood group ( 354) 532 138.7 1.4e-32
NP_001275502 (OMIM: 606074) globoside alpha-1,3-N- ( 211) 397 105.5 8.6e-23
NP_001269558 (OMIM: 606074) globoside alpha-1,3-N- ( 294) 146 44.1 0.00036
>>XP_011516939 (OMIM: 613699) PREDICTED: glycosyltransfe (276 aa)
initn: 1908 init1: 1908 opt: 1908 Z-score: 2529.3 bits: 475.8 E(85289): 3.8e-134
Smith-Waterman score: 1908; 100.0% identity (100.0% similar) in 276 aa overlap (1-276:1-276)
10 20 30 40 50 60
pF1KE0 MNSKRMLLLVLFAFSLMLVERYFRNHQVEELRLSDWFHPRKRPDVITKTDWLAPVLWEGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNSKRMLLLVLFAFSLMLVERYFRNHQVEELRLSDWFHPRKRPDVITKTDWLAPVLWEGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FDRRVLEKHYRRRNITVGLAVFATGRFAEEYLRPFLHSANKHFMTGYRVIFYIMVDAFFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FDRRVLEKHYRRRNITVGLAVFATGRFAEEYLRPFLHSANKHFMTGYRVIFYIMVDAFFK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LPDIEPSPLRTFKAFKVGTERWWLDGPLVHVKSLGEHIASHIQDEVDFLFSMAANQVFQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPDIEPSPLRTFKAFKVGTERWWLDGPLVHVKSLGEHIASHIQDEVDFLFSMAANQVFQN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 EFGVETLGPLVAQLHAWWYFRNTKNFPYERRPTSAACIPFGQGDFYYGNLMVGGTPHNIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EFGVETLGPLVAQLHAWWYFRNTKNFPYERRPTSAACIPFGQGDFYYGNLMVGGTPHNIL
190 200 210 220 230 240
250 260 270
pF1KE0 DFIKEYLNGVIHDIKNGLNSTYEKHLNKYFYLNKPT
::::::::::::::::::::::::::::::::::::
XP_011 DFIKEYLNGVIHDIKNGLNSTYEKHLNKYFYLNKPT
250 260 270
>>NP_892019 (OMIM: 613699) glycosyltransferase 6 domain- (276 aa)
initn: 1908 init1: 1908 opt: 1908 Z-score: 2529.3 bits: 475.8 E(85289): 3.8e-134
Smith-Waterman score: 1908; 100.0% identity (100.0% similar) in 276 aa overlap (1-276:1-276)
10 20 30 40 50 60
pF1KE0 MNSKRMLLLVLFAFSLMLVERYFRNHQVEELRLSDWFHPRKRPDVITKTDWLAPVLWEGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 MNSKRMLLLVLFAFSLMLVERYFRNHQVEELRLSDWFHPRKRPDVITKTDWLAPVLWEGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FDRRVLEKHYRRRNITVGLAVFATGRFAEEYLRPFLHSANKHFMTGYRVIFYIMVDAFFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 FDRRVLEKHYRRRNITVGLAVFATGRFAEEYLRPFLHSANKHFMTGYRVIFYIMVDAFFK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LPDIEPSPLRTFKAFKVGTERWWLDGPLVHVKSLGEHIASHIQDEVDFLFSMAANQVFQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 LPDIEPSPLRTFKAFKVGTERWWLDGPLVHVKSLGEHIASHIQDEVDFLFSMAANQVFQN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 EFGVETLGPLVAQLHAWWYFRNTKNFPYERRPTSAACIPFGQGDFYYGNLMVGGTPHNIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_892 EFGVETLGPLVAQLHAWWYFRNTKNFPYERRPTSAACIPFGQGDFYYGNLMVGGTPHNIL
190 200 210 220 230 240
250 260 270
pF1KE0 DFIKEYLNGVIHDIKNGLNSTYEKHLNKYFYLNKPT
::::::::::::::::::::::::::::::::::::
NP_892 DFIKEYLNGVIHDIKNGLNSTYEKHLNKYFYLNKPT
250 260 270
>>XP_011516940 (OMIM: 613699) PREDICTED: glycosyltransfe (244 aa)
initn: 1327 init1: 1327 opt: 1327 Z-score: 1760.7 bits: 333.4 E(85289): 2.5e-91
Smith-Waterman score: 1327; 99.0% identity (99.0% similar) in 193 aa overlap (84-276:52-244)
60 70 80 90 100 110
pF1KE0 PVLWEGTFDRRVLEKHYRRRNITVGLAVFATGRFAEEYLRPFLHSANKHFMTGYRVIFYI
: :::::::::::::::::::::::::::
XP_011 SGHSFPLTNSAEAVGPTPPRLYIPSSLASDTPMFAEEYLRPFLHSANKHFMTGYRVIFYI
30 40 50 60 70 80
120 130 140 150 160 170
pF1KE0 MVDAFFKLPDIEPSPLRTFKAFKVGTERWWLDGPLVHVKSLGEHIASHIQDEVDFLFSMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVDAFFKLPDIEPSPLRTFKAFKVGTERWWLDGPLVHVKSLGEHIASHIQDEVDFLFSMA
90 100 110 120 130 140
180 190 200 210 220 230
pF1KE0 ANQVFQNEFGVETLGPLVAQLHAWWYFRNTKNFPYERRPTSAACIPFGQGDFYYGNLMVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ANQVFQNEFGVETLGPLVAQLHAWWYFRNTKNFPYERRPTSAACIPFGQGDFYYGNLMVG
150 160 170 180 190 200
240 250 260 270
pF1KE0 GTPHNILDFIKEYLNGVIHDIKNGLNSTYEKHLNKYFYLNKPT
:::::::::::::::::::::::::::::::::::::::::::
XP_011 GTPHNILDFIKEYLNGVIHDIKNGLNSTYEKHLNKYFYLNKPT
210 220 230 240
>>XP_011516935 (OMIM: 613699) PREDICTED: glycosyltransfe (312 aa)
initn: 1327 init1: 1327 opt: 1327 Z-score: 1759.2 bits: 333.5 E(85289): 3e-91
Smith-Waterman score: 1801; 88.3% identity (88.3% similar) in 308 aa overlap (5-276:5-312)
10 20 30 40 50 60
pF1KE0 MNSKRMLLLVLFAFSLMLVERYFRNHQVEELRLSDWFHPRKRPDVITKTDWLAPVLWEGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNSKRMLLLVLFAFSLMLVERYFRNHQVEELRLSDWFHPRKRPDVITKTDWLAPVLWEGT
10 20 30 40 50 60
70 80
pF1KE0 FDRRVLEKHYRRRNITVGLAVFATGR----------------------------------
::::::::::::::::::::::::::
XP_011 FDRRVLEKHYRRRNITVGLAVFATGRPSRSGHSFPLTNSAEAVGPTPPRLYIPSSLASDT
70 80 90 100 110 120
90 100 110 120 130 140
pF1KE0 --FAEEYLRPFLHSANKHFMTGYRVIFYIMVDAFFKLPDIEPSPLRTFKAFKVGTERWWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PMFAEEYLRPFLHSANKHFMTGYRVIFYIMVDAFFKLPDIEPSPLRTFKAFKVGTERWWL
130 140 150 160 170 180
150 160 170 180 190 200
pF1KE0 DGPLVHVKSLGEHIASHIQDEVDFLFSMAANQVFQNEFGVETLGPLVAQLHAWWYFRNTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGPLVHVKSLGEHIASHIQDEVDFLFSMAANQVFQNEFGVETLGPLVAQLHAWWYFRNTK
190 200 210 220 230 240
210 220 230 240 250 260
pF1KE0 NFPYERRPTSAACIPFGQGDFYYGNLMVGGTPHNILDFIKEYLNGVIHDIKNGLNSTYEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NFPYERRPTSAACIPFGQGDFYYGNLMVGGTPHNILDFIKEYLNGVIHDIKNGLNSTYEK
250 260 270 280 290 300
270
pF1KE0 HLNKYFYLNKPT
::::::::::::
XP_011 HLNKYFYLNKPT
310
>>XP_011516937 (OMIM: 613699) PREDICTED: glycosyltransfe (312 aa)
initn: 1327 init1: 1327 opt: 1327 Z-score: 1759.2 bits: 333.5 E(85289): 3e-91
Smith-Waterman score: 1801; 88.3% identity (88.3% similar) in 308 aa overlap (5-276:5-312)
10 20 30 40 50 60
pF1KE0 MNSKRMLLLVLFAFSLMLVERYFRNHQVEELRLSDWFHPRKRPDVITKTDWLAPVLWEGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNSKRMLLLVLFAFSLMLVERYFRNHQVEELRLSDWFHPRKRPDVITKTDWLAPVLWEGT
10 20 30 40 50 60
70 80
pF1KE0 FDRRVLEKHYRRRNITVGLAVFATGR----------------------------------
::::::::::::::::::::::::::
XP_011 FDRRVLEKHYRRRNITVGLAVFATGRPSRSGHSFPLTNSAEAVGPTPPRLYIPSSLASDT
70 80 90 100 110 120
90 100 110 120 130 140
pF1KE0 --FAEEYLRPFLHSANKHFMTGYRVIFYIMVDAFFKLPDIEPSPLRTFKAFKVGTERWWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PMFAEEYLRPFLHSANKHFMTGYRVIFYIMVDAFFKLPDIEPSPLRTFKAFKVGTERWWL
130 140 150 160 170 180
150 160 170 180 190 200
pF1KE0 DGPLVHVKSLGEHIASHIQDEVDFLFSMAANQVFQNEFGVETLGPLVAQLHAWWYFRNTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGPLVHVKSLGEHIASHIQDEVDFLFSMAANQVFQNEFGVETLGPLVAQLHAWWYFRNTK
190 200 210 220 230 240
210 220 230 240 250 260
pF1KE0 NFPYERRPTSAACIPFGQGDFYYGNLMVGGTPHNILDFIKEYLNGVIHDIKNGLNSTYEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NFPYERRPTSAACIPFGQGDFYYGNLMVGGTPHNILDFIKEYLNGVIHDIKNGLNSTYEK
250 260 270 280 290 300
270
pF1KE0 HLNKYFYLNKPT
::::::::::::
XP_011 HLNKYFYLNKPT
310
>>XP_011516938 (OMIM: 613699) PREDICTED: glycosyltransfe (312 aa)
initn: 1327 init1: 1327 opt: 1327 Z-score: 1759.2 bits: 333.5 E(85289): 3e-91
Smith-Waterman score: 1801; 88.3% identity (88.3% similar) in 308 aa overlap (5-276:5-312)
10 20 30 40 50 60
pF1KE0 MNSKRMLLLVLFAFSLMLVERYFRNHQVEELRLSDWFHPRKRPDVITKTDWLAPVLWEGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNSKRMLLLVLFAFSLMLVERYFRNHQVEELRLSDWFHPRKRPDVITKTDWLAPVLWEGT
10 20 30 40 50 60
70 80
pF1KE0 FDRRVLEKHYRRRNITVGLAVFATGR----------------------------------
::::::::::::::::::::::::::
XP_011 FDRRVLEKHYRRRNITVGLAVFATGRPSRSGHSFPLTNSAEAVGPTPPRLYIPSSLASDT
70 80 90 100 110 120
90 100 110 120 130 140
pF1KE0 --FAEEYLRPFLHSANKHFMTGYRVIFYIMVDAFFKLPDIEPSPLRTFKAFKVGTERWWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PMFAEEYLRPFLHSANKHFMTGYRVIFYIMVDAFFKLPDIEPSPLRTFKAFKVGTERWWL
130 140 150 160 170 180
150 160 170 180 190 200
pF1KE0 DGPLVHVKSLGEHIASHIQDEVDFLFSMAANQVFQNEFGVETLGPLVAQLHAWWYFRNTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGPLVHVKSLGEHIASHIQDEVDFLFSMAANQVFQNEFGVETLGPLVAQLHAWWYFRNTK
190 200 210 220 230 240
210 220 230 240 250 260
pF1KE0 NFPYERRPTSAACIPFGQGDFYYGNLMVGGTPHNILDFIKEYLNGVIHDIKNGLNSTYEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NFPYERRPTSAACIPFGQGDFYYGNLMVGGTPHNILDFIKEYLNGVIHDIKNGLNSTYEK
250 260 270 280 290 300
270
pF1KE0 HLNKYFYLNKPT
::::::::::::
XP_011 HLNKYFYLNKPT
310
>>XP_011516936 (OMIM: 613699) PREDICTED: glycosyltransfe (312 aa)
initn: 1327 init1: 1327 opt: 1327 Z-score: 1759.2 bits: 333.5 E(85289): 3e-91
Smith-Waterman score: 1801; 88.3% identity (88.3% similar) in 308 aa overlap (5-276:5-312)
10 20 30 40 50 60
pF1KE0 MNSKRMLLLVLFAFSLMLVERYFRNHQVEELRLSDWFHPRKRPDVITKTDWLAPVLWEGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNSKRMLLLVLFAFSLMLVERYFRNHQVEELRLSDWFHPRKRPDVITKTDWLAPVLWEGT
10 20 30 40 50 60
70 80
pF1KE0 FDRRVLEKHYRRRNITVGLAVFATGR----------------------------------
::::::::::::::::::::::::::
XP_011 FDRRVLEKHYRRRNITVGLAVFATGRPSRSGHSFPLTNSAEAVGPTPPRLYIPSSLASDT
70 80 90 100 110 120
90 100 110 120 130 140
pF1KE0 --FAEEYLRPFLHSANKHFMTGYRVIFYIMVDAFFKLPDIEPSPLRTFKAFKVGTERWWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PMFAEEYLRPFLHSANKHFMTGYRVIFYIMVDAFFKLPDIEPSPLRTFKAFKVGTERWWL
130 140 150 160 170 180
150 160 170 180 190 200
pF1KE0 DGPLVHVKSLGEHIASHIQDEVDFLFSMAANQVFQNEFGVETLGPLVAQLHAWWYFRNTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGPLVHVKSLGEHIASHIQDEVDFLFSMAANQVFQNEFGVETLGPLVAQLHAWWYFRNTK
190 200 210 220 230 240
210 220 230 240 250 260
pF1KE0 NFPYERRPTSAACIPFGQGDFYYGNLMVGGTPHNILDFIKEYLNGVIHDIKNGLNSTYEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NFPYERRPTSAACIPFGQGDFYYGNLMVGGTPHNILDFIKEYLNGVIHDIKNGLNSTYEK
250 260 270 280 290 300
270
pF1KE0 HLNKYFYLNKPT
::::::::::::
XP_011 HLNKYFYLNKPT
310
>>NP_068836 (OMIM: 606074) globoside alpha-1,3-N-acetylg (347 aa)
initn: 538 init1: 381 opt: 575 Z-score: 762.8 bits: 149.3 E(85289): 9.5e-36
Smith-Waterman score: 575; 34.6% identity (69.9% similar) in 269 aa overlap (14-276:46-311)
10 20 30 40
pF1KE0 MNSKRMLLLVLFAFSLMLVERYFRNHQVEELRLSDWFHPR---
:.. : .: :.. .. . :.. .:.
NP_068 AGTSLSVLWVYLENWLPVSYVPYYLPCPEIFNMKL--HYKREKPLQPVVWSQYPQPKLLE
20 30 40 50 60 70
50 60 70 80 90
pF1KE0 KRP-DVITKTDWLAPVLWEGTFDRRVLEKHYRRRNITVGLAVFATGRFAEEYLRPFLHSA
.:: ...: : ::::.. ::::. ..:.. :. :.:.:..:::.:.... ... ::.::
NP_068 HRPTQLLTLTPWLAPIVSEGTFNPELLQHIYQPLNLTIGVTVFAVGKYTH-FIQSFLESA
80 90 100 110 120 130
100 110 120 130 140 150
pF1KE0 NKHFMTGYRVIFYIMVDAFFKLPDIEPSPLRTFKAFKVGTERWWLDGPLVHVKSLGEHIA
.. :: :::: .::..: .: . .: : .... . . : . . .......:::
NP_068 EEFFMRGYRVHYYIFTDNPAAVPGVPLGPHRLLSSIPIQGHSHWEETSMRRMETISQHIA
140 150 160 170 180 190
160 170 180 190 200 210
pF1KE0 SHIQDEVDFLFSMAANQVFQNEFGVETLGPLVAQLHAWWYFRNTKNFPYERRPTSAACIP
.. . :::.:: . ...::.: .: :::: ::: .: .: ..:::::: .:.: .
NP_068 KRAHREVDYLFCLDVDMVFRNPWGPETLGDLVAAIHPSYYAVPRQQFPYERRRVSTAFVA
200 210 220 230 240 250
220 230 240 250 260 270
pF1KE0 FGQGDFYYGNLMVGGTPHNILDFIKEYLNGVIHDIKNGLNSTY--EKHLNKYFYLNKPT
..::::::. . :: . .: . ... : ::. ... :.:::..: :::.
NP_068 DSEGDFYYGGAVFGGQVARVYEFTRGCHMAILADKANGIMAAWREESHLNRHFISNKPSK
260 270 280 290 300 310
NP_068 VLSPEYLWDDRKPQPPSLKLIRFSTLDKDISCLRS
320 330 340
>>NP_001275501 (OMIM: 606074) globoside alpha-1,3-N-acet (300 aa)
initn: 538 init1: 381 opt: 574 Z-score: 762.4 bits: 149.0 E(85289): 1e-35
Smith-Waterman score: 574; 34.9% identity (70.1% similar) in 261 aa overlap (22-276:5-264)
10 20 30 40 50
pF1KE0 MNSKRMLLLVLFAFSLMLVERYFRNHQVEELRLSDWFHPR---KRP-DVITKTDWLAPVL
: :.. .. . :.. .:. .:: ...: : ::::..
NP_001 MKLHYKREKPLQPVVWSQYPQPKLLEHRPTQLLTLTPWLAPIV
10 20 30 40
60 70 80 90 100 110
pF1KE0 WEGTFDRRVLEKHYRRRNITVGLAVFATGRFAEEYLRPFLHSANKHFMTGYRVIFYIMVD
::::. ..:.. :. :.:.:..:::.:.... ... ::.::.. :: :::: .::..:
NP_001 SEGTFNPELLQHIYQPLNLTIGVTVFAVGKYTH-FIQSFLESAEEFFMRGYRVHYYIFTD
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE0 AFFKLPDIEPSPLRTFKAFKVGTERWWLDGPLVHVKSLGEHIASHIQDEVDFLFSMAANQ
.: . .: : .... . . : . . .......:::.. . :::.:: . ...
NP_001 NPAAVPGVPLGPHRLLSSIPIQGHSHWEETSMRRMETISQHIAKRAHREVDYLFCLDVDM
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE0 VFQNEFGVETLGPLVAQLHAWWYFRNTKNFPYERRPTSAACIPFGQGDFYYGNLMVGGTP
::.: .: :::: ::: .: .: ..:::::: .:.: . ..::::::. . ::
NP_001 VFRNPWGPETLGDLVAAIHPSYYAVPRQQFPYERRRVSTAFVADSEGDFYYGGAVFGGQV
170 180 190 200 210 220
240 250 260 270
pF1KE0 HNILDFIKEYLNGVIHDIKNGLNSTY--EKHLNKYFYLNKPT
. .: . ... : ::. ... :.:::..: :::.
NP_001 ARVYEFTRGCHMAILADKANGIMAAWREESHLNRHFISNKPSKVLSPEYLWDDRKPQPPS
230 240 250 260 270 280
NP_001 LKLIRFSTLDKDISCLRS
290 300
>>NP_001269561 (OMIM: 606074) globoside alpha-1,3-N-acet (330 aa)
initn: 538 init1: 381 opt: 571 Z-score: 757.8 bits: 148.3 E(85289): 1.8e-35
Smith-Waterman score: 571; 36.0% identity (70.8% similar) in 250 aa overlap (33-276:46-294)
10 20 30 40 50
pF1KE0 SKRMLLLVLFAFSLMLVERYFRNHQVEELRLSDWFHPR---KRP-DVITKTDWLAPVLWE
::.. .:. .:: ...: : ::::.. :
NP_001 AGTSLSVLWVYLENWLPVSYVPYYLPCPEILSQYPQPKLLEHRPTQLLTLTPWLAPIVSE
20 30 40 50 60 70
60 70 80 90 100 110
pF1KE0 GTFDRRVLEKHYRRRNITVGLAVFATGRFAEEYLRPFLHSANKHFMTGYRVIFYIMVDAF
:::. ..:.. :. :.:.:..:::.:.... ... ::.::.. :: :::: .::..:
NP_001 GTFNPELLQHIYQPLNLTIGVTVFAVGKYTH-FIQSFLESAEEFFMRGYRVHYYIFTDNP
80 90 100 110 120 130
120 130 140 150 160 170
pF1KE0 FKLPDIEPSPLRTFKAFKVGTERWWLDGPLVHVKSLGEHIASHIQDEVDFLFSMAANQVF
.: . .: : .... . . : . . .......:::.. . :::.:: . ...::
NP_001 AAVPGVPLGPHRLLSSIPIQGHSHWEETSMRRMETISQHIAKRAHREVDYLFCLDVDMVF
140 150 160 170 180 190
180 190 200 210 220 230
pF1KE0 QNEFGVETLGPLVAQLHAWWYFRNTKNFPYERRPTSAACIPFGQGDFYYGNLMVGGTPHN
.: .: :::: ::: .: .: ..:::::: .:.: . ..::::::. . ::
NP_001 RNPWGPETLGDLVAAIHPSYYAVPRQQFPYERRRVSTAFVADSEGDFYYGGAVFGGQVAR
200 210 220 230 240 250
240 250 260 270
pF1KE0 ILDFIKEYLNGVIHDIKNGLNSTY--EKHLNKYFYLNKPT
. .: . ... : ::. ... :.:::..: :::.
NP_001 VYEFTRGCHMAILADKANGIMAAWREESHLNRHFISNKPSKVLSPEYLWDDRKPQPPSLK
260 270 280 290 300 310
NP_001 LIRFSTLDKDISCLRS
320 330
276 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 20:02:23 2016 done: Thu Nov 3 20:02:24 2016
Total Scan time: 6.010 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]