Result of FASTA (ccds) for
pF1KE0226
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0226, 128 aa
1>>>pF1KE0226 128 - 128 aa - 128 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.6466+/-0.00073; mu= 14.2442+/- 0.044
mean_var=57.2121+/-11.421, 0's: 0 Z-trim(108.7): 41 B-trim: 151 in 1/49
Lambda= 0.169563
statistics sampled from 10311 (10357) to 10311 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.705), E-opt: 0.2 (0.318), width: 16
Scan time: 1.350
The best scores are: opt bits E(32554)
CCDS4622.1 HIST1H2AH gene_id:85235|Hs108|chr6 ( 128) 810 205.6 6.7e-54
CCDS4634.1 HIST1H2AL gene_id:8332|Hs108|chr6 ( 130) 810 205.6 6.8e-54
CCDS4626.1 HIST1H2AI gene_id:8329|Hs108|chr6 ( 130) 810 205.6 6.8e-54
CCDS4639.1 HIST1H2AM gene_id:8336|Hs108|chr6 ( 130) 810 205.6 6.8e-54
CCDS4619.1 HIST1H2AG gene_id:8969|Hs108|chr6 ( 130) 810 205.6 6.8e-54
CCDS4632.1 HIST1H2AK gene_id:8330|Hs108|chr6 ( 130) 810 205.6 6.8e-54
CCDS4591.1 HIST1H2AD gene_id:3013|Hs108|chr6 ( 130) 806 204.7 1.3e-53
CCDS4628.1 HIST1H2AJ gene_id:8331|Hs108|chr6 ( 128) 805 204.4 1.6e-53
CCDS30849.1 HIST2H2AA4 gene_id:723790|Hs108|chr1 ( 130) 805 204.4 1.6e-53
CCDS934.1 HIST2H2AA3 gene_id:8337|Hs108|chr1 ( 130) 805 204.4 1.6e-53
CCDS4585.1 HIST1H2AC gene_id:8334|Hs108|chr6 ( 130) 804 204.2 1.9e-53
CCDS4574.1 HIST1H2AB gene_id:8335|Hs108|chr6 ( 130) 803 203.9 2.2e-53
CCDS4595.1 HIST1H2AE gene_id:3012|Hs108|chr6 ( 130) 803 203.9 2.2e-53
CCDS1573.1 HIST3H2A gene_id:92815|Hs108|chr1 ( 130) 800 203.2 3.7e-53
CCDS937.1 HIST2H2AC gene_id:8338|Hs108|chr1 ( 129) 783 199.0 6.5e-52
CCDS938.1 HIST2H2AB gene_id:317772|Hs108|chr1 ( 130) 776 197.3 2.2e-51
CCDS4562.1 HIST1H2AA gene_id:221613|Hs108|chr6 ( 131) 773 196.6 3.6e-51
CCDS31752.1 H2AFJ gene_id:55766|Hs108|chr12 ( 129) 767 195.1 9.9e-51
CCDS8410.1 H2AFX gene_id:3014|Hs108|chr11 ( 143) 737 187.8 1.7e-48
CCDS4184.1 H2AFY gene_id:9555|Hs108|chr5 ( 369) 493 128.4 3.4e-30
CCDS4183.1 H2AFY gene_id:9555|Hs108|chr5 ( 371) 493 128.4 3.4e-30
CCDS4185.1 H2AFY gene_id:9555|Hs108|chr5 ( 372) 493 128.4 3.4e-30
CCDS7296.1 H2AFY2 gene_id:55506|Hs108|chr10 ( 372) 483 126.0 1.9e-29
CCDS5496.1 H2AFV gene_id:94239|Hs108|chr7 ( 128) 455 118.8 9.3e-28
CCDS3654.1 H2AFZ gene_id:3015|Hs108|chr4 ( 128) 451 117.8 1.8e-27
CCDS5495.1 H2AFV gene_id:94239|Hs108|chr7 ( 114) 409 107.5 2.1e-24
CCDS5497.1 H2AFV gene_id:94239|Hs108|chr7 ( 102) 360 95.5 7.7e-21
CCDS35461.1 H2AFB2 gene_id:474381|Hs108|chrX ( 115) 299 80.6 2.6e-16
CCDS35464.1 H2AFB3 gene_id:83740|Hs108|chrX ( 115) 299 80.6 2.6e-16
CCDS35458.1 H2AFB1 gene_id:474382|Hs108|chrX ( 115) 290 78.4 1.2e-15
CCDS47581.1 H2AFV gene_id:94239|Hs108|chr7 ( 66) 237 65.3 6.2e-12
CCDS5498.1 H2AFV gene_id:94239|Hs108|chr7 ( 90) 224 62.2 7.2e-11
>>CCDS4622.1 HIST1H2AH gene_id:85235|Hs108|chr6 (128 aa)
initn: 810 init1: 810 opt: 810 Z-score: 1081.2 bits: 205.6 E(32554): 6.7e-54
Smith-Waterman score: 810; 100.0% identity (100.0% similar) in 128 aa overlap (1-128:1-128)
10 20 30 40 50 60
pF1KE0 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
pF1KE0 TESHHKAK
::::::::
CCDS46 TESHHKAK
>>CCDS4634.1 HIST1H2AL gene_id:8332|Hs108|chr6 (130 aa)
initn: 810 init1: 810 opt: 810 Z-score: 1081.1 bits: 205.6 E(32554): 6.8e-54
Smith-Waterman score: 810; 100.0% identity (100.0% similar) in 128 aa overlap (1-128:1-128)
10 20 30 40 50 60
pF1KE0 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
pF1KE0 TESHHKAK
::::::::
CCDS46 TESHHKAKGK
130
>>CCDS4626.1 HIST1H2AI gene_id:8329|Hs108|chr6 (130 aa)
initn: 810 init1: 810 opt: 810 Z-score: 1081.1 bits: 205.6 E(32554): 6.8e-54
Smith-Waterman score: 810; 100.0% identity (100.0% similar) in 128 aa overlap (1-128:1-128)
10 20 30 40 50 60
pF1KE0 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
pF1KE0 TESHHKAK
::::::::
CCDS46 TESHHKAKGK
130
>>CCDS4639.1 HIST1H2AM gene_id:8336|Hs108|chr6 (130 aa)
initn: 810 init1: 810 opt: 810 Z-score: 1081.1 bits: 205.6 E(32554): 6.8e-54
Smith-Waterman score: 810; 100.0% identity (100.0% similar) in 128 aa overlap (1-128:1-128)
10 20 30 40 50 60
pF1KE0 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
pF1KE0 TESHHKAK
::::::::
CCDS46 TESHHKAKGK
130
>>CCDS4619.1 HIST1H2AG gene_id:8969|Hs108|chr6 (130 aa)
initn: 810 init1: 810 opt: 810 Z-score: 1081.1 bits: 205.6 E(32554): 6.8e-54
Smith-Waterman score: 810; 100.0% identity (100.0% similar) in 128 aa overlap (1-128:1-128)
10 20 30 40 50 60
pF1KE0 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
pF1KE0 TESHHKAK
::::::::
CCDS46 TESHHKAKGK
130
>>CCDS4632.1 HIST1H2AK gene_id:8330|Hs108|chr6 (130 aa)
initn: 810 init1: 810 opt: 810 Z-score: 1081.1 bits: 205.6 E(32554): 6.8e-54
Smith-Waterman score: 810; 100.0% identity (100.0% similar) in 128 aa overlap (1-128:1-128)
10 20 30 40 50 60
pF1KE0 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
pF1KE0 TESHHKAK
::::::::
CCDS46 TESHHKAKGK
130
>>CCDS4591.1 HIST1H2AD gene_id:3013|Hs108|chr6 (130 aa)
initn: 806 init1: 806 opt: 806 Z-score: 1075.8 bits: 204.7 E(32554): 1.3e-53
Smith-Waterman score: 806; 99.2% identity (100.0% similar) in 128 aa overlap (1-128:1-128)
10 20 30 40 50 60
pF1KE0 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
CCDS45 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
pF1KE0 TESHHKAK
::::::::
CCDS45 TESHHKAKGK
130
>>CCDS4628.1 HIST1H2AJ gene_id:8331|Hs108|chr6 (128 aa)
initn: 828 init1: 805 opt: 805 Z-score: 1074.6 bits: 204.4 E(32554): 1.6e-53
Smith-Waterman score: 805; 99.2% identity (100.0% similar) in 128 aa overlap (1-128:1-128)
10 20 30 40 50 60
pF1KE0 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
pF1KE0 TESHHKAK
::::::.:
CCDS46 TESHHKTK
>>CCDS30849.1 HIST2H2AA4 gene_id:723790|Hs108|chr1 (130 aa)
initn: 805 init1: 805 opt: 805 Z-score: 1074.5 bits: 204.4 E(32554): 1.6e-53
Smith-Waterman score: 805; 98.4% identity (100.0% similar) in 128 aa overlap (1-128:1-128)
10 20 30 40 50 60
pF1KE0 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
::::::::::::::::.::::::::::::::::::::::::::::::::::.::::::::
CCDS30 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
pF1KE0 TESHHKAK
::::::::
CCDS30 TESHHKAKGK
130
>>CCDS934.1 HIST2H2AA3 gene_id:8337|Hs108|chr1 (130 aa)
initn: 805 init1: 805 opt: 805 Z-score: 1074.5 bits: 204.4 E(32554): 1.6e-53
Smith-Waterman score: 805; 98.4% identity (100.0% similar) in 128 aa overlap (1-128:1-128)
10 20 30 40 50 60
pF1KE0 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
::::::::::::::::.::::::::::::::::::::::::::::::::::.::::::::
CCDS93 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
pF1KE0 TESHHKAK
::::::::
CCDS93 TESHHKAKGK
130
128 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 20:32:29 2016 done: Thu Nov 3 20:32:30 2016
Total Scan time: 1.350 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]